RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 BCS1LQ9Y276 419 aa17.03■□□□□ 0.32
SNORD88B-201ENST00000408454 TJP1Q07157 1748 aa17.03■□□□□ 0.32
SNORD88B-201ENST00000408454 RGL2O15211 777 aa17.02■□□□□ 0.32
SNORD88B-201ENST00000408454 SLC39A6Q13433 755 aa17.02■□□□□ 0.32
SNORD88B-201ENST00000408454 KCPQ6ZWJ8 1503 aa17.01■□□□□ 0.31
SNORD88B-201ENST00000408454 PXDNLA1KZ92 1463 aa17.01■□□□□ 0.31
SNORD88B-201ENST00000408454 C1QTNF8P60827 252 aa17.01■□□□□ 0.31
SNORD88B-201ENST00000408454 DALRD3Q5D0E6 543 aaKnown RBP17.01■□□□□ 0.31
SNORD88B-201ENST00000408454 KIF13BQ9NQT8 1826 aa17■□□□□ 0.31
SNORD88B-201ENST00000408454 SNRPA1P09661 255 aaKnown RBP17■□□□□ 0.31
SNORD88B-201ENST00000408454 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
SNORD88B-201ENST00000408454 USPL1Q5W0Q7 1092 aa17■□□□□ 0.31
SNORD88B-201ENST00000408454 CANXP27824 592 aaKnown RBP16.99■□□□□ 0.31
SNORD88B-201ENST00000408454 FKBP8Q14318 412 aa16.99■□□□□ 0.31
SNORD88B-201ENST00000408454 IL17REQ8NFR9 667 aa16.99■□□□□ 0.31
SNORD88B-201ENST00000408454 ZBTB1Q9Y2K1 713 aa16.99■□□□□ 0.31
SNORD88B-201ENST00000408454 UBR2Q8IWV8 1755 aa16.99■□□□□ 0.31
SNORD88B-201ENST00000408454 ATP10DQ9P241 1426 aa16.98■□□□□ 0.31
SNORD88B-201ENST00000408454 ZNF496Q96IT1 587 aaPredicted RBP16.98■□□□□ 0.31
SNORD88B-201ENST00000408454 ZC3H4Q9UPT8 1303 aaKnown RBP16.97■□□□□ 0.31
SNORD88B-201ENST00000408454 H0YIN7 160 aa16.97■□□□□ 0.31
SNORD88B-201ENST00000408454 TM4SF1P30408 202 aa16.97■□□□□ 0.31
SNORD88B-201ENST00000408454 PDE6BP35913 854 aa16.97■□□□□ 0.31
SNORD88B-201ENST00000408454 EIF5P55010 431 aaKnown RBP16.97■□□□□ 0.31
SNORD88B-201ENST00000408454 TAF7Q15545 349 aaPredicted RBP16.97■□□□□ 0.31
SNORD88B-201ENST00000408454 ARHGAP27Q6ZUM4 889 aa16.97■□□□□ 0.31
SNORD88B-201ENST00000408454 SRP68Q9UHB9 627 aaKnown RBP16.97■□□□□ 0.31
SNORD88B-201ENST00000408454 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
SNORD88B-201ENST00000408454 A0A0G2JLW4 131 aa16.96■□□□□ 0.31
SNORD88B-201ENST00000408454 POLRMTO00411 1230 aaKnown RBP16.96■□□□□ 0.31
SNORD88B-201ENST00000408454 DPEP1P16444 411 aa16.96■□□□□ 0.31
SNORD88B-201ENST00000408454 ST5P78524 1137 aa16.96■□□□□ 0.31
SNORD88B-201ENST00000408454 CLEC4GQ6UXB4 293 aa16.96■□□□□ 0.31
SNORD88B-201ENST00000408454 SMIM5Q71RC9 77 aa16.96■□□□□ 0.31
SNORD88B-201ENST00000408454 SETDB2Q96T68 719 aa16.96■□□□□ 0.31
SNORD88B-201ENST00000408454 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
SNORD88B-201ENST00000408454 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.3
SNORD88B-201ENST00000408454 SERPINB2P05120 415 aa16.95■□□□□ 0.3
SNORD88B-201ENST00000408454 SOGA3Q5TF21 947 aa16.95■□□□□ 0.3
SNORD88B-201ENST00000408454 MYH14Q7Z406 1995 aaKnown RBP16.95■□□□□ 0.3
SNORD88B-201ENST00000408454 KDM2BQ8NHM5 1336 aa16.95■□□□□ 0.3
SNORD88B-201ENST00000408454 ADCY9O60503 1353 aa16.94■□□□□ 0.3
SNORD88B-201ENST00000408454 PHACTR3Q96KR7 559 aa16.94■□□□□ 0.3
SNORD88B-201ENST00000408454 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
SNORD88B-201ENST00000408454 NFIXQ14938 502 aa16.93■□□□□ 0.3
SNORD88B-201ENST00000408454 C16orf71Q8IYS4 520 aaPredicted RBP16.93■□□□□ 0.3
SNORD88B-201ENST00000408454 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
SNORD88B-201ENST00000408454 DDR1Q08345 913 aa16.92■□□□□ 0.3
SNORD88B-201ENST00000408454 NFE2L2Q16236 605 aa16.92■□□□□ 0.3
SNORD88B-201ENST00000408454 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
SNORD88B-201ENST00000408454 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
SNORD88B-201ENST00000408454 CNBD1Q8NA66 436 aa16.92■□□□□ 0.3
SNORD88B-201ENST00000408454 BRIP1Q9BX63 1249 aa16.92■□□□□ 0.3
SNORD88B-201ENST00000408454 SIPA1L3O60292 1781 aaPredicted RBP16.92■□□□□ 0.3
SNORD88B-201ENST00000408454 ZEB1P37275 1124 aaPredicted RBP16.91■□□□□ 0.3
SNORD88B-201ENST00000408454 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
SNORD88B-201ENST00000408454 MYBBP1AQ9BQG0 1328 aaKnown RBP16.91■□□□□ 0.3
SNORD88B-201ENST00000408454 MCM10Q7L590 875 aa16.9■□□□□ 0.3
SNORD88B-201ENST00000408454 CHMP4AQ9BY43 222 aa16.9■□□□□ 0.3
SNORD88B-201ENST00000408454 ERBB4Q15303 1308 aa16.9■□□□□ 0.3
SNORD88B-201ENST00000408454 TPTE2Q6XPS3 522 aa16.89■□□□□ 0.29
SNORD88B-201ENST00000408454 C2CD5Q86YS7 1000 aa16.89■□□□□ 0.29
SNORD88B-201ENST00000408454 CNKSR1Q969H4 720 aa16.89■□□□□ 0.29
SNORD88B-201ENST00000408454 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
SNORD88B-201ENST00000408454 SCN7AQ01118 1682 aa16.88■□□□□ 0.29
SNORD88B-201ENST00000408454 KIF6Q6ZMV9 814 aa16.88■□□□□ 0.29
SNORD88B-201ENST00000408454 BICDL1Q6ZP65 573 aa16.88■□□□□ 0.29
SNORD88B-201ENST00000408454 NYXQ9GZU5 481 aa16.88■□□□□ 0.29
SNORD88B-201ENST00000408454 WWC3Q9ULE0 1092 aa16.88■□□□□ 0.29
SNORD88B-201ENST00000408454 GTF2E1P29083 439 aaPredicted RBP16.87■□□□□ 0.29
SNORD88B-201ENST00000408454 NBPF5PQ86XG9 351 aaPredicted RBP16.87■□□□□ 0.29
SNORD88B-201ENST00000408454 TBC1D2BQ9UPU7 963 aa16.87■□□□□ 0.29
SNORD88B-201ENST00000408454 N4BP2Q86UW6 1770 aaPredicted RBP16.87■□□□□ 0.29
SNORD88B-201ENST00000408454 A1BGP04217 495 aa16.86■□□□□ 0.29
SNORD88B-201ENST00000408454 LMNB1P20700 586 aa16.86■□□□□ 0.29
SNORD88B-201ENST00000408454 ZNF526Q8TF50 670 aaPredicted RBP16.86■□□□□ 0.29
SNORD88B-201ENST00000408454 RNF181Q9P0P0 153 aa16.86■□□□□ 0.29
SNORD88B-201ENST00000408454 NRXN2Q9P2S2 1712 aa16.86■□□□□ 0.29
SNORD88B-201ENST00000408454 KIAA1551Q9HCM1 1747 aa16.85■□□□□ 0.29
SNORD88B-201ENST00000408454 TOMM70O94826 608 aa16.85■□□□□ 0.29
SNORD88B-201ENST00000408454 KCNA3P22001 575 aa16.85■□□□□ 0.29
SNORD88B-201ENST00000408454 CALD1Q05682 793 aaKnown RBP16.85■□□□□ 0.29
SNORD88B-201ENST00000408454 C9orf131Q5VYM1 1079 aa16.85■□□□□ 0.29
SNORD88B-201ENST00000408454 STYK1Q6J9G0 422 aa16.85■□□□□ 0.29
SNORD88B-201ENST00000408454 DPY19L2Q6NUT2 758 aa16.85■□□□□ 0.29
SNORD88B-201ENST00000408454 ERVV-1B6SEH8 477 aa16.84■□□□□ 0.29
SNORD88B-201ENST00000408454 CAMTA2O94983 1202 aa16.84■□□□□ 0.29
SNORD88B-201ENST00000408454 CHRNA5P30532 468 aa16.84■□□□□ 0.29
SNORD88B-201ENST00000408454 TBC1D9BQ66K14 1250 aa16.84■□□□□ 0.29
SNORD88B-201ENST00000408454 ZNF622Q969S3 477 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNORD88B-201ENST00000408454 TMX4Q9H1E5 349 aaPredicted RBP16.84■□□□□ 0.29
SNORD88B-201ENST00000408454 BCL2L12Q9HB09 334 aa16.84■□□□□ 0.29
SNORD88B-201ENST00000408454 BRCA1P38398 1863 aaKnown RBP16.84■□□□□ 0.29
SNORD88B-201ENST00000408454 GRIPAP1Q4V328 841 aa16.83■□□□□ 0.28
SNORD88B-201ENST00000408454 MASTLQ96GX5 879 aa16.83■□□□□ 0.28
SNORD88B-201ENST00000408454 PLEKHF1Q96S99 279 aa16.83■□□□□ 0.28
SNORD88B-201ENST00000408454 TSPYL4Q9UJ04 414 aa16.83■□□□□ 0.28
SNORD88B-201ENST00000408454 USP16Q9Y5T5 823 aa16.83■□□□□ 0.28
SNORD88B-201ENST00000408454 HSPA6P17066 643 aa16.82■□□□□ 0.28
SNORD88B-201ENST00000408454 ALDH1B1P30837 517 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms