RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 HEG1Q9ULI3 1381 aa25.72■■□□□ 1.71
SMARCB1-204ENST00000407422 ZPR1O75312 459 aa25.71■■□□□ 1.71
SMARCB1-204ENST00000407422 CANXP27824 592 aaKnown RBP25.71■■□□□ 1.71
SMARCB1-204ENST00000407422 COL15A1P39059 1388 aa25.71■■□□□ 1.71
SMARCB1-204ENST00000407422 BTBD11A6QL63 1104 aa25.7■■□□□ 1.71
SMARCB1-204ENST00000407422 A0A0G2JLW4 131 aa25.7■■□□□ 1.7
SMARCB1-204ENST00000407422 STARD3NLO95772 234 aa25.7■■□□□ 1.7
SMARCB1-204ENST00000407422 DCTN1Q14203 1278 aa25.7■■□□□ 1.7
SMARCB1-204ENST00000407422 TGFB2P61812 414 aa25.69■■□□□ 1.7
SMARCB1-204ENST00000407422 DDX10Q13206 875 aaKnown RBP25.69■■□□□ 1.7
SMARCB1-204ENST00000407422 RTF1Q92541 710 aaKnown RBP25.69■■□□□ 1.7
SMARCB1-204ENST00000407422 NARFQ9UHQ1 456 aa25.68■■□□□ 1.7
SMARCB1-204ENST00000407422 DLG5Q8TDM6 1919 aa25.68■■□□□ 1.7
SMARCB1-204ENST00000407422 TM4SF1P30408 202 aa25.67■■□□□ 1.7
SMARCB1-204ENST00000407422 FMNL2Q96PY5 1086 aa25.67■■□□□ 1.7
SMARCB1-204ENST00000407422 BCL2L12Q9HB09 334 aa25.66■■□□□ 1.7
SMARCB1-204ENST00000407422 POLRMTO00411 1230 aaKnown RBP25.66■■□□□ 1.7
SMARCB1-204ENST00000407422 DPEP1P16444 411 aa25.66■■□□□ 1.7
SMARCB1-204ENST00000407422 BRCA1P38398 1863 aaKnown RBP25.65■■□□□ 1.7
SMARCB1-204ENST00000407422 EIF5P55010 431 aaKnown RBP25.65■■□□□ 1.7
SMARCB1-204ENST00000407422 PLEKHF1Q96S99 279 aa25.65■■□□□ 1.7
SMARCB1-204ENST00000407422 TEX13AQ9BXU3 409 aaPredicted RBP25.65■■□□□ 1.7
SMARCB1-204ENST00000407422 AFDNP55196 1824 aaKnown RBP25.64■■□□□ 1.69
SMARCB1-204ENST00000407422 HTATSF1O43719 755 aaKnown RBP25.63■■□□□ 1.69
SMARCB1-204ENST00000407422 NFIXQ14938 502 aa25.63■■□□□ 1.69
SMARCB1-204ENST00000407422 A1BGP04217 495 aa25.63■■□□□ 1.69
SMARCB1-204ENST00000407422 RALBP1Q15311 655 aa25.63■■□□□ 1.69
SMARCB1-204ENST00000407422 PRAMEF22A3QJZ6 481 aa25.62■■□□□ 1.69
SMARCB1-204ENST00000407422 KCNA3P22001 575 aa25.62■■□□□ 1.69
SMARCB1-204ENST00000407422 BCS1LQ9Y276 419 aa25.62■■□□□ 1.69
SMARCB1-204ENST00000407422 ZNF330Q9Y3S2 320 aaPredicted RBP25.62■■□□□ 1.69
SMARCB1-204ENST00000407422 NEFMP07197 916 aa25.6■■□□□ 1.69
SMARCB1-204ENST00000407422 USP16Q9Y5T5 823 aa25.6■■□□□ 1.69
SMARCB1-204ENST00000407422 A0A087WZG4 1122 aa25.59■■□□□ 1.69
SMARCB1-204ENST00000407422 MIS18AQ9NYP9 233 aa25.59■■□□□ 1.69
SMARCB1-204ENST00000407422 TBC1D2BQ9UPU7 963 aa25.59■■□□□ 1.69
SMARCB1-204ENST00000407422 NRXN2Q9P2S2 1712 aa25.58■■□□□ 1.69
SMARCB1-204ENST00000407422 IL6STP40189 918 aaPredicted RBP25.58■■□□□ 1.69
SMARCB1-204ENST00000407422 CHRNA5P30532 468 aa25.57■■□□□ 1.68
SMARCB1-204ENST00000407422 PIP4K2AP48426 406 aaPredicted RBP25.57■■□□□ 1.68
SMARCB1-204ENST00000407422 TAF7Q15545 349 aaPredicted RBP25.57■■□□□ 1.68
SMARCB1-204ENST00000407422 SCN7AQ01118 1682 aa25.57■■□□□ 1.68
SMARCB1-204ENST00000407422 ATP10DQ9P241 1426 aa25.57■■□□□ 1.68
SMARCB1-204ENST00000407422 NFE2L2Q16236 605 aa25.56■■□□□ 1.68
SMARCB1-204ENST00000407422 BICDL1Q6ZP65 573 aa25.56■■□□□ 1.68
SMARCB1-204ENST00000407422 ADCY9O60503 1353 aa25.56■■□□□ 1.68
SMARCB1-204ENST00000407422 SERPINB2P05120 415 aa25.55■■□□□ 1.68
SMARCB1-204ENST00000407422 SNRPA1P09661 255 aaKnown RBP25.55■■□□□ 1.68
SMARCB1-204ENST00000407422 THUMPD2Q9BTF0 503 aaKnown RBP25.55■■□□□ 1.68
SMARCB1-204ENST00000407422 ARFGEF1Q9Y6D6 1849 aa25.55■■□□□ 1.68
SMARCB1-204ENST00000407422 PIM2Q9P1W9 311 aa25.55■■□□□ 1.68
SMARCB1-204ENST00000407422 TBC1D9BQ66K14 1250 aa25.54■■□□□ 1.68
SMARCB1-204ENST00000407422 MAPK8IP3Q9UPT6 1336 aa25.53■■□□□ 1.68
SMARCB1-204ENST00000407422 PNNQ9H307 717 aaKnown RBP25.53■■□□□ 1.68
SMARCB1-204ENST00000407422 MYBBP1AQ9BQG0 1328 aaKnown RBP25.53■■□□□ 1.68
SMARCB1-204ENST00000407422 KDM3BQ7LBC6 1761 aa25.53■■□□□ 1.68
SMARCB1-204ENST00000407422 ARHGAP27Q6ZUM4 889 aa25.52■■□□□ 1.68
SMARCB1-204ENST00000407422 CARMIL3Q8ND23 1372 aa25.51■■□□□ 1.67
SMARCB1-204ENST00000407422 CAMTA2O94983 1202 aa25.51■■□□□ 1.67
SMARCB1-204ENST00000407422 DALRD3Q5D0E6 543 aaKnown RBP25.51■■□□□ 1.67
SMARCB1-204ENST00000407422 NPM2Q86SE8 214 aaKnown RBP25.51■■□□□ 1.67
SMARCB1-204ENST00000407422 BCORQ6W2J9 1755 aa25.5■■□□□ 1.67
SMARCB1-204ENST00000407422 GIGYF1O75420 1035 aaPredicted RBP25.5■■□□□ 1.67
SMARCB1-204ENST00000407422 NBPF26B4DH59 902 aa25.49■■□□□ 1.67
SMARCB1-204ENST00000407422 C1QTNF8P60827 252 aa25.49■■□□□ 1.67
SMARCB1-204ENST00000407422 NBPF10Q6P3W6 841 aaKnown RBP25.49■■□□□ 1.67
SMARCB1-204ENST00000407422 DZIP3Q86Y13 1208 aaKnown RBP25.49■■□□□ 1.67
SMARCB1-204ENST00000407422 NBPF15Q8N660 670 aa25.49■■□□□ 1.67
SMARCB1-204ENST00000407422 ZNF526Q8TF50 670 aaPredicted RBP25.49■■□□□ 1.67
SMARCB1-204ENST00000407422 LAMB4A4D0S4 1761 aa25.47■■□□□ 1.67
SMARCB1-204ENST00000407422 ANKRD31Q8N7Z5 1873 aa25.47■■□□□ 1.67
SMARCB1-204ENST00000407422 DLEC1Q9Y238 1755 aa25.47■■□□□ 1.67
SMARCB1-204ENST00000407422 PNISRQ8TF01 805 aaKnown RBP25.47■■□□□ 1.67
SMARCB1-204ENST00000407422 CCDC24Q8N4L8 307 aa25.46■■□□□ 1.67
SMARCB1-204ENST00000407422 GPBP1L1Q9HC44 474 aaPredicted RBP25.46■■□□□ 1.67
SMARCB1-204ENST00000407422 RIPK4P57078 832 aa25.45■■□□□ 1.67
SMARCB1-204ENST00000407422 EIF4A1P60842 406 aaKnown RBP25.45■■□□□ 1.66
SMARCB1-204ENST00000407422 PRR5LQ6MZQ0 368 aa25.44■■□□□ 1.66
SMARCB1-204ENST00000407422 C2CD5Q86YS7 1000 aa25.44■■□□□ 1.66
SMARCB1-204ENST00000407422 CCDC146Q8IYE0 955 aa25.44■■□□□ 1.66
SMARCB1-204ENST00000407422 SETDB2Q96T68 719 aa25.44■■□□□ 1.66
SMARCB1-204ENST00000407422 TMPOP42166 694 aaKnown RBP25.42■■□□□ 1.66
SMARCB1-204ENST00000407422 PRKRIP1Q9H875 184 aaPredicted RBP25.42■■□□□ 1.66
SMARCB1-204ENST00000407422 RRP7AQ9Y3A4 280 aaKnown RBP25.42■■□□□ 1.66
SMARCB1-204ENST00000407422 H0YIN7 160 aa25.41■■□□□ 1.66
SMARCB1-204ENST00000407422 SBF1O95248 1867 aa25.4■■□□□ 1.66
SMARCB1-204ENST00000407422 BRIP1Q9BX63 1249 aa25.4■■□□□ 1.66
SMARCB1-204ENST00000407422 COL11A2P13942 1736 aaPredicted RBP25.4■■□□□ 1.66
SMARCB1-204ENST00000407422 CEP350Q5VT06 3117 aa25.39■■□□□ 1.66
SMARCB1-204ENST00000407422 C9orf131Q5VYM1 1079 aa25.39■■□□□ 1.66
SMARCB1-204ENST00000407422 CLEC4GQ6UXB4 293 aa25.39■■□□□ 1.66
SMARCB1-204ENST00000407422 CNBD1Q8NA66 436 aa25.39■■□□□ 1.66
SMARCB1-204ENST00000407422 WDR43Q15061 677 aaKnown RBP eCLIP25.38■■□□□ 1.65
SMARCB1-204ENST00000407422 NEUROD2Q15784 382 aa25.38■■□□□ 1.65
SMARCB1-204ENST00000407422 TTLL6Q8N841 843 aa25.38■■□□□ 1.65
SMARCB1-204ENST00000407422 TSPYL4Q9UJ04 414 aa25.38■■□□□ 1.65
SMARCB1-204ENST00000407422 NGEFQ8N5V2 710 aa25.37■■□□□ 1.65
SMARCB1-204ENST00000407422 ADAMTS8Q9UP79 889 aa25.37■■□□□ 1.65
SMARCB1-204ENST00000407422 ZNF652Q9Y2D9 606 aa25.37■■□□□ 1.65
SMARCB1-204ENST00000407422 NPHP1O15259 732 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms