RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 PDRG1Q9NUG6 133 aa17.86■□□□□ 0.45
PPM1F-203ENST00000407142 SMTNL1A8MU46 457 aa17.86■□□□□ 0.45
PPM1F-203ENST00000407142 MAP3K12Q12852 859 aa17.86■□□□□ 0.45
PPM1F-203ENST00000407142 ACEP12821 1306 aa17.86■□□□□ 0.45
PPM1F-203ENST00000407142 CWC27Q6UX04 472 aaKnown RBP17.86■□□□□ 0.45
PPM1F-203ENST00000407142 DNAAF4Q8WXU2 420 aa17.86■□□□□ 0.45
PPM1F-203ENST00000407142 PLCH2O75038 1416 aa17.86■□□□□ 0.45
PPM1F-203ENST00000407142 THUMPD2Q9BTF0 503 aaKnown RBP17.86■□□□□ 0.45
PPM1F-203ENST00000407142 KIF2AO00139 706 aaPredicted RBP17.85■□□□□ 0.45
PPM1F-203ENST00000407142 SLFN5Q08AF3 891 aa17.85■□□□□ 0.45
PPM1F-203ENST00000407142 GLRX3O76003 335 aaKnown RBP17.85■□□□□ 0.45
PPM1F-203ENST00000407142 PPP1R42Q7Z4L9 355 aa17.85■□□□□ 0.45
PPM1F-203ENST00000407142 TTC21AQ8NDW8 1320 aa17.85■□□□□ 0.45
PPM1F-203ENST00000407142 SYCE3A1L190 88 aa17.85■□□□□ 0.45
PPM1F-203ENST00000407142 PRKCSHP14314 528 aaPredicted RBP17.85■□□□□ 0.45
PPM1F-203ENST00000407142 TNIP1Q15025 636 aa17.85■□□□□ 0.45
PPM1F-203ENST00000407142 MKNK2Q9HBH9 465 aa17.85■□□□□ 0.45
PPM1F-203ENST00000407142 LRRFIP2Q9Y608 721 aaKnown RBP17.85■□□□□ 0.45
PPM1F-203ENST00000407142 TTLL12Q14166 644 aaPredicted RBP17.85■□□□□ 0.45
PPM1F-203ENST00000407142 CDC5LQ99459 802 aaKnown RBP17.85■□□□□ 0.45
PPM1F-203ENST00000407142 RFC4P35249 363 aa17.85■□□□□ 0.45
PPM1F-203ENST00000407142 PDCL3Q9H2J4 239 aa17.85■□□□□ 0.45
PPM1F-203ENST00000407142 GBP3Q9H0R5 595 aa17.84■□□□□ 0.45
PPM1F-203ENST00000407142 DHX37Q8IY37 1157 aaKnown RBP17.84■□□□□ 0.45
PPM1F-203ENST00000407142 SEC63Q9UGP8 760 aaKnown RBP17.84■□□□□ 0.45
PPM1F-203ENST00000407142 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
PPM1F-203ENST00000407142 MAP3K11Q16584 847 aa17.84■□□□□ 0.45
PPM1F-203ENST00000407142 JAKMIP1Q96N16 626 aaKnown RBP17.84■□□□□ 0.45
PPM1F-203ENST00000407142 TMEM57Q8N5G2 664 aa17.84■□□□□ 0.45
PPM1F-203ENST00000407142 ST5P78524 1137 aa17.83■□□□□ 0.45
PPM1F-203ENST00000407142 DDX46Q7L014 1031 aaKnown RBP17.83■□□□□ 0.45
PPM1F-203ENST00000407142 NUTM1Q86Y26 1132 aa17.83■□□□□ 0.45
PPM1F-203ENST00000407142 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.45
PPM1F-203ENST00000407142 ZNF518AQ6AHZ1 1483 aa17.83■□□□□ 0.45
PPM1F-203ENST00000407142 EPB41L2O43491 1005 aaKnown RBP17.83■□□□□ 0.44
PPM1F-203ENST00000407142 CBX1P83916 185 aa17.83■□□□□ 0.44
PPM1F-203ENST00000407142 A2MP01023 1474 aa17.82■□□□□ 0.44
PPM1F-203ENST00000407142 C6orf229H3BNL8 230 aa17.82■□□□□ 0.44
PPM1F-203ENST00000407142 ARHGAP29Q52LW3 1261 aa17.82■□□□□ 0.44
PPM1F-203ENST00000407142 EZRP15311 586 aaKnown RBP17.82■□□□□ 0.44
PPM1F-203ENST00000407142 MAPK8IP2Q13387 824 aaPredicted RBP17.82■□□□□ 0.44
PPM1F-203ENST00000407142 CCDC148Q8NFR7 591 aa17.82■□□□□ 0.44
PPM1F-203ENST00000407142 GIMAP7Q8NHV1 300 aa17.82■□□□□ 0.44
PPM1F-203ENST00000407142 PRDM10Q9NQV6 1147 aa17.82■□□□□ 0.44
PPM1F-203ENST00000407142 WDR7Q9Y4E6 1490 aa17.82■□□□□ 0.44
PPM1F-203ENST00000407142 PTPN14Q15678 1187 aa17.81■□□□□ 0.44
PPM1F-203ENST00000407142 NAPBQ9H115 298 aa17.81■□□□□ 0.44
PPM1F-203ENST00000407142 RAPGEF6Q8TEU7 1601 aa17.81■□□□□ 0.44
PPM1F-203ENST00000407142 ANKRD36BQ8N2N9 1353 aa17.81■□□□□ 0.44
PPM1F-203ENST00000407142 CHRNA2Q15822 529 aa17.81■□□□□ 0.44
PPM1F-203ENST00000407142 EXOC6BQ9Y2D4 811 aa17.81■□□□□ 0.44
PPM1F-203ENST00000407142 SHTN1A0MZ66 631 aa17.81■□□□□ 0.44
PPM1F-203ENST00000407142 PAXIP1Q6ZW49 1069 aaPredicted RBP17.81■□□□□ 0.44
PPM1F-203ENST00000407142 ZNF219Q9P2Y4 722 aaPredicted RBP17.81■□□□□ 0.44
PPM1F-203ENST00000407142 LDHCP07864 332 aa17.81■□□□□ 0.44
PPM1F-203ENST00000407142 MX1P20591 662 aa17.81■□□□□ 0.44
PPM1F-203ENST00000407142 CRACR2AQ9BSW2 395 aa17.81■□□□□ 0.44
PPM1F-203ENST00000407142 KIAA1328Q86T90 577 aa17.8■□□□□ 0.44
PPM1F-203ENST00000407142 SMARCC1Q92922 1105 aaPredicted RBP17.8■□□□□ 0.44
PPM1F-203ENST00000407142 ZBTB3Q9H5J0 574 aa17.8■□□□□ 0.44
PPM1F-203ENST00000407142 SSBP05455 408 aaKnown RBP eCLIP17.8■□□□□ 0.44
PPM1F-203ENST00000407142 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
PPM1F-203ENST00000407142 DUOX2Q9NRD8 1548 aa17.8■□□□□ 0.44
PPM1F-203ENST00000407142 MINDY4BA8MYZ0 360 aa17.8■□□□□ 0.44
PPM1F-203ENST00000407142 GPTP24298 496 aa17.8■□□□□ 0.44
PPM1F-203ENST00000407142 SNRPA1P09661 255 aaKnown RBP17.8■□□□□ 0.44
PPM1F-203ENST00000407142 ZNF444Q8N0Y2 327 aaPredicted RBP17.8■□□□□ 0.44
PPM1F-203ENST00000407142 TAF4BQ92750 862 aa17.8■□□□□ 0.44
PPM1F-203ENST00000407142 CEP131Q9UPN4 1083 aa17.8■□□□□ 0.44
PPM1F-203ENST00000407142 PTPRCP08575 1304 aa17.79■□□□□ 0.44
PPM1F-203ENST00000407142 RIMS2Q9UQ26 1411 aa17.79■□□□□ 0.44
PPM1F-203ENST00000407142 CFAP100Q494V2 611 aa17.79■□□□□ 0.44
PPM1F-203ENST00000407142 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
PPM1F-203ENST00000407142 ZCRB1Q8TBF4 217 aaKnown RBP17.79■□□□□ 0.44
PPM1F-203ENST00000407142 RNF41Q9H4P4 317 aaPredicted RBP17.78■□□□□ 0.44
PPM1F-203ENST00000407142 CGNQ9P2M7 1197 aaKnown RBP17.78■□□□□ 0.44
PPM1F-203ENST00000407142 CCDC196A0A1B0GTZ2 297 aa17.78■□□□□ 0.44
PPM1F-203ENST00000407142 TRIM21P19474 475 aaKnown RBP17.78■□□□□ 0.44
PPM1F-203ENST00000407142 ZNF622Q969S3 477 aaKnown RBP eCLIP17.78■□□□□ 0.44
PPM1F-203ENST00000407142 ZSCAN12O43309 604 aa17.78■□□□□ 0.44
PPM1F-203ENST00000407142 SFPQP23246 707 aaKnown RBP eCLIP17.78■□□□□ 0.44
PPM1F-203ENST00000407142 GPATCH8Q9UKJ3 1502 aaKnown RBP17.78■□□□□ 0.44
PPM1F-203ENST00000407142 MATR3P43243 847 aaKnown RBP eCLIP17.78■□□□□ 0.44
PPM1F-203ENST00000407142 KIF18AQ8NI77 898 aa17.77■□□□□ 0.44
PPM1F-203ENST00000407142 WDR97A6NE52 1622 aa17.77■□□□□ 0.44
PPM1F-203ENST00000407142 GBP2P32456 591 aaPredicted RBP17.77■□□□□ 0.44
PPM1F-203ENST00000407142 SPTY2D1Q68D10 685 aaPredicted RBP17.77■□□□□ 0.44
PPM1F-203ENST00000407142 DYDC1Q8WWB3 177 aa17.77■□□□□ 0.44
PPM1F-203ENST00000407142 EHMT1Q9H9B1 1298 aa17.77■□□□□ 0.44
PPM1F-203ENST00000407142 CALCOCO1Q9P1Z2 691 aa17.77■□□□□ 0.44
PPM1F-203ENST00000407142 EIF5P55010 431 aaKnown RBP17.77■□□□□ 0.43
PPM1F-203ENST00000407142 CUL5Q93034 780 aa17.77■□□□□ 0.43
PPM1F-203ENST00000407142 TTF1Q15361 905 aaPredicted RBP17.77■□□□□ 0.43
PPM1F-203ENST00000407142 CAMK4Q16566 473 aa17.77■□□□□ 0.43
PPM1F-203ENST00000407142 CTCFLQ8NI51 663 aaPredicted RBP17.77■□□□□ 0.43
PPM1F-203ENST00000407142 C8orf37Q96NL8 207 aa17.77■□□□□ 0.43
PPM1F-203ENST00000407142 DNAI2Q9GZS0 605 aa17.76■□□□□ 0.43
PPM1F-203ENST00000407142 CCDC96Q2M329 555 aa17.76■□□□□ 0.43
PPM1F-203ENST00000407142 CCDC183Q5T5S1 534 aa17.76■□□□□ 0.43
PPM1F-203ENST00000407142 NBPF6Q5VWK0 638 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms