RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CWC25Q9NXE8 425 aaPredicted RBP5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 GLI2P10070 1586 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 XBP1P17861 261 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 IGHMBP2P38935 993 aaKnown RBP5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 CCDC73Q6ZRK6 1079 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 ANKARQ7Z5J8 1434 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 BICD2Q8TD16 824 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 DIP2CQ9Y2E4 1556 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 IL2RBP14784 551 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 CHPF2Q9P2E5 772 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 NPHP4O75161 1426 aaPredicted RBP5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 USP6P35125 1406 aa5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 BECN2A8MW95 431 aa5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 ZBTB7BO15156 539 aaPredicted RBP5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 IFIT5Q13325 482 aaKnown RBP5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 CWC27Q6UX04 472 aaKnown RBP5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 TBC1D9Q6ZT07 1266 aa5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 RASSF8Q8NHQ8 419 aa5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 RHPN1Q8TCX5 695 aa5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 PLEKHF1Q96S99 279 aa5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 PDRG1Q9NUG6 133 aa5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 ROBO2Q9HCK4 1378 aa5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 KDM2BQ8NHM5 1336 aa5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 TSPOAP1O95153 1857 aa5.65□□□□□ -1.5
PCDH11X-207ENST00000406881 GRM8O00222 908 aa5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 TOM1O60784 492 aa5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 MCM4P33991 863 aa5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 LRRC59Q96AG4 307 aaKnown RBP5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 ZNF396Q96N95 335 aaPredicted RBP5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 DDX21Q9NR30 783 aaKnown RBP eCLIP5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 SH2B1Q9NRF2 756 aaPredicted RBP5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 NEURL4Q96JN8 1562 aa5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 BCORL1Q5H9F3 1711 aa5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 BRPF1P55201 1214 aaPredicted RBP5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 METTL24Q5JXM2 366 aa5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 CEP85Q6P2H3 762 aa5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 CDCA7Q9BWT1 371 aaPredicted RBP5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 MED14O60244 1454 aa5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 CDK12Q9NYV4 1490 aaPredicted RBP5.65□□□□□ -1.51
PCDH11X-207ENST00000406881 HMGB1P09429 215 aaKnown RBP5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 IFIT1P09914 478 aaKnown RBP5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 XAGE3Q8WTP9 111 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 SMARCC1Q92922 1105 aaPredicted RBP5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 JAKMIP1Q96N16 626 aaKnown RBP5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 ORAI2Q96SN7 254 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 TRIM34Q9BYJ4 488 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 BRMS1Q9HCU9 246 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 U3KPZ7 1027 aaPredicted RBP5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 CAMSAP1Q5T5Y3 1602 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 ALKQ9UM73 1620 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 PCDH11XQ9BZA7 1347 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 PCDH11YQ9BZA8 1340 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 ANKRD18BA2A2Z9 1011 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 FAM177BA6PVY3 158 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 PDE1AP54750 535 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 ANAPC15P60006 121 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 FOXD4L6Q3SYB3 417 aaPredicted RBP5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 FOXD4L3Q6VB84 417 aaPredicted RBP5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 ABCA6Q8N139 1617 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 ZC3H13Q5T200 1668 aaKnown RBP5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 PPRC1Q5VV67 1664 aaKnown RBP5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 MAP4K4O95819 1239 aaPredicted RBP5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 PIP4K2BP78356 416 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 SASS6Q6UVJ0 657 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 COPS6Q7L5N1 327 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 CCDC47Q96A33 483 aaKnown RBP5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 TBC1D2Q9BYX2 928 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 TTC41PQ6P2S7 1318 aa5.64□□□□□ -1.51
PCDH11X-207ENST00000406881 MARCH6O60337 910 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 CDKL5O76039 1030 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 FKBP4Q02790 459 aaKnown RBP eCLIP5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 C8orf34Q49A92 452 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 TNNQ9UQP3 1299 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 KIAA1210Q9ULL0 1709 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 DLC1Q96QB1 1528 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 CEP152O94986 1710 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 IMMTQ16891 758 aaKnown RBP5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 UBE3BQ7Z3V4 1068 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 SNX21Q969T3 373 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 BOLA2Q9H3K6 86 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 TRMT112Q9UI30 125 aaKnown RBP5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 IGSF1Q8N6C5 1336 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 SDSP20132 328 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 KRT85P78386 507 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 SKAP1Q86WV1 359 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 JMYQ8N9B5 988 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 HMG20BQ9P0W2 317 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 ABCC4O15439 1325 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 AOX1Q06278 1338 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 PRR36Q9H6K5 1346 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 KIDINS220Q9ULH0 1771 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 PRPF40AO75400 957 aaKnown RBP5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 ADAMTS2O95450 1211 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 TPM3P06753 285 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 SLC5A1P13866 664 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 HSPA2P54652 639 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 TTF1Q15361 905 aaPredicted RBP5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 NGLY1Q96IV0 654 aa5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 CCDC8Q9H0W5 538 aaPredicted RBP5.63□□□□□ -1.51
PCDH11X-207ENST00000406881 ZBTB3Q9H5J0 574 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms