RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 ZBED9Q6R2W3 1325 aa10.92□□□□□ -0.66
GPC3-203ENST00000406757 AKAP4Q5JQC9 854 aa10.92□□□□□ -0.66
GPC3-203ENST00000406757 IFNL2Q8IZJ0 200 aa10.92□□□□□ -0.66
GPC3-203ENST00000406757 RTF1Q92541 710 aaKnown RBP10.92□□□□□ -0.66
GPC3-203ENST00000406757 ZNF521Q96K83 1311 aa10.91□□□□□ -0.66
GPC3-203ENST00000406757 GIGYF1O75420 1035 aaPredicted RBP10.91□□□□□ -0.66
GPC3-203ENST00000406757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.91□□□□□ -0.661e-47■■□□□ 11.9
GPC3-203ENST00000406757 MIS18AQ9NYP9 233 aa10.91□□□□□ -0.66
GPC3-203ENST00000406757 C5P01031 1676 aa10.91□□□□□ -0.66
GPC3-203ENST00000406757 RNMTO43148 476 aaKnown RBP10.9□□□□□ -0.66
GPC3-203ENST00000406757 CCDC27Q2M243 656 aa10.9□□□□□ -0.66
GPC3-203ENST00000406757 SMIM5Q71RC9 77 aa10.9□□□□□ -0.66
GPC3-203ENST00000406757 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
GPC3-203ENST00000406757 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
GPC3-203ENST00000406757 GRIN3BO60391 1043 aa10.89□□□□□ -0.67
GPC3-203ENST00000406757 PHF14O94880 888 aa10.89□□□□□ -0.67
GPC3-203ENST00000406757 GOLGA2Q08379 1002 aa10.89□□□□□ -0.67
GPC3-203ENST00000406757 LMOD3Q0VAK6 560 aa10.89□□□□□ -0.67
GPC3-203ENST00000406757 AMIGO3Q86WK7 504 aa10.89□□□□□ -0.67
GPC3-203ENST00000406757 TSR2Q969E8 191 aaKnown RBP10.89□□□□□ -0.67
GPC3-203ENST00000406757 AK7Q96M32 723 aa10.89□□□□□ -0.67
GPC3-203ENST00000406757 PKD1L3Q7Z443 1732 aa10.89□□□□□ -0.67
GPC3-203ENST00000406757 TOGARAM1Q9Y4F4 1720 aa10.89□□□□□ -0.67
GPC3-203ENST00000406757 SLFN5Q08AF3 891 aa10.88□□□□□ -0.67
GPC3-203ENST00000406757 WDR63Q8IWG1 891 aa10.88□□□□□ -0.67
GPC3-203ENST00000406757 FLAD1Q8NFF5 587 aa10.88□□□□□ -0.67
GPC3-203ENST00000406757 PIGBQ92521 554 aa10.88□□□□□ -0.67
GPC3-203ENST00000406757 CEP350Q5VT06 3117 aa10.87□□□□□ -0.67
GPC3-203ENST00000406757 C4BP0C0L5 1744 aa10.87□□□□□ -0.67
GPC3-203ENST00000406757 KDM6AO15550 1401 aaPredicted RBP10.87□□□□□ -0.67
GPC3-203ENST00000406757 KCNQ3O43525 872 aa10.87□□□□□ -0.67
GPC3-203ENST00000406757 HTATSF1O43719 755 aaKnown RBP10.87□□□□□ -0.67
GPC3-203ENST00000406757 NGEFQ8N5V2 710 aa10.87□□□□□ -0.67
GPC3-203ENST00000406757 NFATC2IPQ8NCF5 419 aa10.87□□□□□ -0.67
GPC3-203ENST00000406757 SMARCC1Q92922 1105 aaPredicted RBP10.87□□□□□ -0.67
GPC3-203ENST00000406757 WWC3Q9ULE0 1092 aa10.87□□□□□ -0.67
GPC3-203ENST00000406757 CD2APQ9Y5K6 639 aa10.87□□□□□ -0.67
GPC3-203ENST00000406757 TAF1LQ8IZX4 1826 aa10.86□□□□□ -0.67
GPC3-203ENST00000406757 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.86□□□□□ -0.67
GPC3-203ENST00000406757 CABP4P57796 275 aa10.86□□□□□ -0.67
GPC3-203ENST00000406757 TEFQ10587 303 aa10.86□□□□□ -0.67
GPC3-203ENST00000406757 SLC39A6Q13433 755 aa10.86□□□□□ -0.67
GPC3-203ENST00000406757 NKX1-1Q15270 411 aaPredicted RBP10.86□□□□□ -0.67
GPC3-203ENST00000406757 DCAF5Q96JK2 942 aa10.86□□□□□ -0.67
GPC3-203ENST00000406757 ATP10DQ9P241 1426 aa10.85□□□□□ -0.67
GPC3-203ENST00000406757 LOC102724428A0A0B4J2F2 783 aa10.85□□□□□ -0.67
GPC3-203ENST00000406757 HSP90AB1P08238 724 aaKnown RBP10.85□□□□□ -0.67
GPC3-203ENST00000406757 HMGB2P26583 209 aaKnown RBP10.85□□□□□ -0.67
GPC3-203ENST00000406757 SIK1P57059 783 aa10.85□□□□□ -0.67
GPC3-203ENST00000406757 FKBP8Q14318 412 aa10.85□□□□□ -0.67
GPC3-203ENST00000406757 TAF7Q15545 349 aaPredicted RBP10.85□□□□□ -0.67
GPC3-203ENST00000406757 KRT24Q2M2I5 525 aa10.85□□□□□ -0.67
GPC3-203ENST00000406757 LINC00116Q8NCU8 138 aa10.85□□□□□ -0.67
GPC3-203ENST00000406757 DCBLD2Q96PD2 775 aa10.85□□□□□ -0.67
GPC3-203ENST00000406757 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
GPC3-203ENST00000406757 ITGB4P16144 1822 aa10.85□□□□□ -0.67
GPC3-203ENST00000406757 VIRMAQ69YN4 1812 aaKnown RBP10.84□□□□□ -0.67
GPC3-203ENST00000406757 BTBD11A6QL63 1104 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 E9PSI1 815 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 ELL2O00472 640 aaPredicted RBP10.84□□□□□ -0.67
GPC3-203ENST00000406757 ZNF853P0CG23 659 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 GNAI1P63096 354 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 DUSP27Q5VZP5 1158 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 ZNF526Q8TF50 670 aaPredicted RBP10.84□□□□□ -0.67
GPC3-203ENST00000406757 CFAP44Q96MT7 982 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 SLC52A2Q9HAB3 445 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 IFT57Q9NWB7 429 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 TMOD3Q9NYL9 352 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 TSPYL4Q9UJ04 414 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 ASAP1Q9ULH1 1129 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 CEMIPQ8WUJ3 1361 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 FANCIQ9NVI1 1328 aa10.84□□□□□ -0.67
GPC3-203ENST00000406757 CHL1O00533 1208 aa10.83□□□□□ -0.68
GPC3-203ENST00000406757 SSFA2P28290 1259 aa10.83□□□□□ -0.68
GPC3-203ENST00000406757 ATP6V1AP38606 617 aa10.83□□□□□ -0.68
GPC3-203ENST00000406757 CALD1Q05682 793 aaKnown RBP10.83□□□□□ -0.68
GPC3-203ENST00000406757 EXOSC9Q06265 439 aaKnown RBP10.83□□□□□ -0.68
GPC3-203ENST00000406757 ITPK1Q13572 414 aa10.83□□□□□ -0.68
GPC3-203ENST00000406757 TRMT2AQ8IZ69 625 aaKnown RBP10.83□□□□□ -0.68
GPC3-203ENST00000406757 UBR3Q6ZT12 1888 aa10.83□□□□□ -0.68
GPC3-203ENST00000406757 IL16Q14005 1332 aa10.83□□□□□ -0.68
GPC3-203ENST00000406757 SCN11AQ9UI33 1791 aa10.82□□□□□ -0.68
GPC3-203ENST00000406757 PLEKHG2Q9H7P9 1386 aa10.82□□□□□ -0.68
GPC3-203ENST00000406757 ERVV-2B6SEH9 535 aa10.82□□□□□ -0.68
GPC3-203ENST00000406757 GNPATO15228 680 aa10.82□□□□□ -0.68
GPC3-203ENST00000406757 TSPYL6Q8N831 410 aa10.82□□□□□ -0.68
GPC3-203ENST00000406757 C8orf58Q8NAV2 365 aa10.82□□□□□ -0.68
GPC3-203ENST00000406757 MYH16Q9H6N6 1097 aa10.82□□□□□ -0.68
GPC3-203ENST00000406757 GPBP1L1Q9HC44 474 aaPredicted RBP10.82□□□□□ -0.68
GPC3-203ENST00000406757 TCERG1O14776 1098 aaKnown RBP10.81□□□□□ -0.68
GPC3-203ENST00000406757 ATG3Q9NT62 314 aa10.81□□□□□ -0.68
GPC3-203ENST00000406757 ADCY9O60503 1353 aa10.8□□□□□ -0.68
GPC3-203ENST00000406757 ADAMTS7Q9UKP4 1686 aa10.8□□□□□ -0.68
GPC3-203ENST00000406757 PRAMEF22A3QJZ6 481 aa10.8□□□□□ -0.68
GPC3-203ENST00000406757 SPDYE4A6NLX3 237 aa10.8□□□□□ -0.68
GPC3-203ENST00000406757 CENPBP07199 599 aaPredicted RBP10.8□□□□□ -0.68
GPC3-203ENST00000406757 PTCD1O75127 700 aaKnown RBP10.79□□□□□ -0.68
GPC3-203ENST00000406757 MMP10P09238 476 aa10.79□□□□□ -0.68
GPC3-203ENST00000406757 EIF4A1P60842 406 aaKnown RBP10.79□□□□□ -0.68
GPC3-203ENST00000406757 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms