RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 IRF6O14896 467 aa19.4■□□□□ 0.7
COL4A3BP-204ENST00000405807 RRS1Q15050 365 aaKnown RBP19.4■□□□□ 0.7
COL4A3BP-204ENST00000405807 KRT24Q2M2I5 525 aa19.4■□□□□ 0.7
COL4A3BP-204ENST00000405807 GTF2A1P52655 376 aaPredicted RBP19.4■□□□□ 0.7
COL4A3BP-204ENST00000405807 PRIMPOLQ96LW4 560 aa19.4■□□□□ 0.7
COL4A3BP-204ENST00000405807 ESYT1Q9BSJ8 1104 aa19.4■□□□□ 0.7
COL4A3BP-204ENST00000405807 ZRANB1Q9UGI0 708 aa19.4■□□□□ 0.7
COL4A3BP-204ENST00000405807 HMGN5P82970 282 aaKnown RBP19.39■□□□□ 0.7
COL4A3BP-204ENST00000405807 FEZ1Q99689 392 aa19.39■□□□□ 0.7
COL4A3BP-204ENST00000405807 STAG3Q9UJ98 1225 aa19.39■□□□□ 0.7
COL4A3BP-204ENST00000405807 CEP120Q8N960 986 aa19.39■□□□□ 0.69
COL4A3BP-204ENST00000405807 CEP83Q9Y592 693 aa19.39■□□□□ 0.69
COL4A3BP-204ENST00000405807 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
COL4A3BP-204ENST00000405807 SLC4A2P04920 1241 aa19.38■□□□□ 0.69
COL4A3BP-204ENST00000405807 DLC1Q96QB1 1528 aa19.38■□□□□ 0.69
COL4A3BP-204ENST00000405807 FAM184AQ8NB25 1140 aa19.38■□□□□ 0.69
COL4A3BP-204ENST00000405807 OGFRQ9NZT2 677 aa19.38■□□□□ 0.69
COL4A3BP-204ENST00000405807 UVSSAQ2YD98 709 aa19.38■□□□□ 0.69
COL4A3BP-204ENST00000405807 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.38■□□□□ 0.69
COL4A3BP-204ENST00000405807 DIP2CQ9Y2E4 1556 aa19.38■□□□□ 0.69
COL4A3BP-204ENST00000405807 CLSTN1O94985 981 aa19.37■□□□□ 0.69
COL4A3BP-204ENST00000405807 CCT4P50991 539 aaKnown RBP19.37■□□□□ 0.69
COL4A3BP-204ENST00000405807 BCL2L12Q9HB09 334 aa19.37■□□□□ 0.69
COL4A3BP-204ENST00000405807 NCAPGQ9BPX3 1015 aa19.37■□□□□ 0.69
COL4A3BP-204ENST00000405807 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.37■□□□□ 0.69
COL4A3BP-204ENST00000405807 WASLO00401 505 aaPredicted RBP19.36■□□□□ 0.69
COL4A3BP-204ENST00000405807 SULT6B1Q6IMI4 303 aa19.36■□□□□ 0.69
COL4A3BP-204ENST00000405807 SH3BP1Q9Y3L3 701 aa19.36■□□□□ 0.69
COL4A3BP-204ENST00000405807 PREX1Q8TCU6 1659 aa19.36■□□□□ 0.69
COL4A3BP-204ENST00000405807 NEO1Q92859 1461 aa19.35■□□□□ 0.69
COL4A3BP-204ENST00000405807 HSP90AB3PQ58FF7 597 aa19.35■□□□□ 0.69
COL4A3BP-204ENST00000405807 RSPH14Q9UHP6 348 aa19.35■□□□□ 0.69
COL4A3BP-204ENST00000405807 MCM10Q7L590 875 aa19.35■□□□□ 0.69
COL4A3BP-204ENST00000405807 MPNDQ8N594 471 aa19.35■□□□□ 0.69
COL4A3BP-204ENST00000405807 ANO2Q9NQ90 1003 aa19.35■□□□□ 0.69
COL4A3BP-204ENST00000405807 WDR33Q9C0J8 1336 aaKnown RBP19.35■□□□□ 0.69
COL4A3BP-204ENST00000405807 GNAI2P04899 355 aa19.34■□□□□ 0.69
COL4A3BP-204ENST00000405807 NBPF20Q3BBV1 942 aa19.34■□□□□ 0.69
COL4A3BP-204ENST00000405807 SLC4A10Q6U841 1118 aa19.34■□□□□ 0.69
COL4A3BP-204ENST00000405807 PALD1Q9ULE6 856 aa19.34■□□□□ 0.69
COL4A3BP-204ENST00000405807 ERICH4A6NGS2 130 aa19.34■□□□□ 0.69
COL4A3BP-204ENST00000405807 IL17RAQ96F46 866 aa19.34■□□□□ 0.69
COL4A3BP-204ENST00000405807 LRRCC1Q9C099 1032 aa19.34■□□□□ 0.69
COL4A3BP-204ENST00000405807 CHMLP26374 656 aa19.33■□□□□ 0.69
COL4A3BP-204ENST00000405807 SSH2Q76I76 1423 aa19.33■□□□□ 0.69
COL4A3BP-204ENST00000405807 SALL3Q9BXA9 1300 aa19.33■□□□□ 0.69
COL4A3BP-204ENST00000405807 CCDC172P0C7W6 258 aa19.33■□□□□ 0.69
COL4A3BP-204ENST00000405807 MX1P20591 662 aa19.33■□□□□ 0.69
COL4A3BP-204ENST00000405807 OS9Q13438 667 aaPredicted RBP19.33■□□□□ 0.69
COL4A3BP-204ENST00000405807 FBXO31Q5XUX0 539 aaPredicted RBP19.33■□□□□ 0.69
COL4A3BP-204ENST00000405807 NOL8Q76FK4 1167 aaKnown RBP19.33■□□□□ 0.69
COL4A3BP-204ENST00000405807 USP48Q86UV5 1035 aa19.33■□□□□ 0.69
COL4A3BP-204ENST00000405807 NOP2P46087 812 aaKnown RBP19.33■□□□□ 0.68
COL4A3BP-204ENST00000405807 SATB1Q01826 763 aa19.33■□□□□ 0.68
COL4A3BP-204ENST00000405807 EXOC6BQ9Y2D4 811 aa19.33■□□□□ 0.68
COL4A3BP-204ENST00000405807 SEMA3FQ13275 785 aa19.32■□□□□ 0.68
COL4A3BP-204ENST00000405807 EIF4A2Q14240 407 aaKnown RBP19.32■□□□□ 0.68
COL4A3BP-204ENST00000405807 TERF2Q15554 542 aa19.32■□□□□ 0.68
COL4A3BP-204ENST00000405807 RILPL2Q969X0 211 aa19.32■□□□□ 0.68
COL4A3BP-204ENST00000405807 TMX1Q9H3N1 280 aa19.32■□□□□ 0.68
COL4A3BP-204ENST00000405807 NUDT16Q96DE0 195 aaKnown RBP19.32■□□□□ 0.68
COL4A3BP-204ENST00000405807 GADD45BO75293 160 aaPredicted RBP19.31■□□□□ 0.68
COL4A3BP-204ENST00000405807 SRCIN1Q9C0H9 1055 aa19.31■□□□□ 0.68
COL4A3BP-204ENST00000405807 CCDC61Q9Y6R9 512 aa19.31■□□□□ 0.68
COL4A3BP-204ENST00000405807 GOLIM4O00461 696 aa19.31■□□□□ 0.68
COL4A3BP-204ENST00000405807 EPB41L2O43491 1005 aaKnown RBP19.31■□□□□ 0.68
COL4A3BP-204ENST00000405807 TSHZ3Q63HK5 1081 aa19.31■□□□□ 0.68
COL4A3BP-204ENST00000405807 PIBF1Q8WXW3 757 aa19.31■□□□□ 0.68
COL4A3BP-204ENST00000405807 CCDC183Q5T5S1 534 aa19.3■□□□□ 0.68
COL4A3BP-204ENST00000405807 GDPD2Q9HCC8 539 aa19.3■□□□□ 0.68
COL4A3BP-204ENST00000405807 F6X3S4 739 aa19.29■□□□□ 0.68
COL4A3BP-204ENST00000405807 TMEM87AQ8NBN3 555 aa19.29■□□□□ 0.68
COL4A3BP-204ENST00000405807 DHX16O60231 1041 aaKnown RBP19.29■□□□□ 0.68
COL4A3BP-204ENST00000405807 NOLC1Q14978 699 aaKnown RBP eCLIP19.29■□□□□ 0.68
COL4A3BP-204ENST00000405807 FOXD4L6Q3SYB3 417 aaPredicted RBP19.29■□□□□ 0.68
COL4A3BP-204ENST00000405807 FOXD4L3Q6VB84 417 aaPredicted RBP19.29■□□□□ 0.68
COL4A3BP-204ENST00000405807 RNF217Q8TC41 542 aa19.29■□□□□ 0.68
COL4A3BP-204ENST00000405807 STAP2Q9UGK3 403 aa19.29■□□□□ 0.68
COL4A3BP-204ENST00000405807 G2E3Q7L622 706 aa19.29■□□□□ 0.68
COL4A3BP-204ENST00000405807 UPF3BQ9BZI7 483 aaKnown RBP19.29■□□□□ 0.68
COL4A3BP-204ENST00000405807 CPS1P31327 1500 aa19.28■□□□□ 0.68
COL4A3BP-204ENST00000405807 GNAI3P08754 354 aa19.28■□□□□ 0.68
COL4A3BP-204ENST00000405807 ATP8B2P98198 1209 aa19.28■□□□□ 0.68
COL4A3BP-204ENST00000405807 GPATCH11Q8N954 259 aa19.28■□□□□ 0.68
COL4A3BP-204ENST00000405807 USP25Q9UHP3 1055 aa19.27■□□□□ 0.68
COL4A3BP-204ENST00000405807 CRB1P82279 1406 aa19.27■□□□□ 0.68
COL4A3BP-204ENST00000405807 ADCY5O95622 1261 aa19.26■□□□□ 0.67
COL4A3BP-204ENST00000405807 ICE2Q659A1 982 aa19.26■□□□□ 0.67
COL4A3BP-204ENST00000405807 TSPYL4Q9UJ04 414 aa19.26■□□□□ 0.67
COL4A3BP-204ENST00000405807 HSPA4P34932 840 aa19.25■□□□□ 0.67
COL4A3BP-204ENST00000405807 ANKRD7Q92527 254 aa19.25■□□□□ 0.67
COL4A3BP-204ENST00000405807 STK31Q9BXU1 1019 aa19.25■□□□□ 0.67
COL4A3BP-204ENST00000405807 MIS18AQ9NYP9 233 aa19.25■□□□□ 0.67
COL4A3BP-204ENST00000405807 AOX1Q06278 1338 aa19.25■□□□□ 0.67
COL4A3BP-204ENST00000405807 UBE2HP62256 183 aa19.24■□□□□ 0.67
COL4A3BP-204ENST00000405807 TPRNQ4KMQ1 711 aa19.24■□□□□ 0.67
COL4A3BP-204ENST00000405807 RTF1Q92541 710 aaKnown RBP19.24■□□□□ 0.67
COL4A3BP-204ENST00000405807 MAP2K1Q02750 393 aaPredicted RBP19.24■□□□□ 0.67
COL4A3BP-204ENST00000405807 NRKQ7Z2Y5 1582 aa19.24■□□□□ 0.67
COL4A3BP-204ENST00000405807 NCKAP5LQ9HCH0 1330 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms