RNA–Protein interactions for RNA: ENST00000405444.3

TBC1D1-204, Transcript of TBC1 domain family member 1, humanhuman

TSL 4

Gene TBC1D1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-204ENST00000405444 HEG1Q9ULI3 1381 aa22.52■■□□□ 1.2
TBC1D1-204ENST00000405444 TM4SF1P30408 202 aa22.52■■□□□ 1.2
TBC1D1-204ENST00000405444 C1QTNF8P60827 252 aa22.52■■□□□ 1.2
TBC1D1-204ENST00000405444 PHACTR3Q96KR7 559 aa22.52■■□□□ 1.2
TBC1D1-204ENST00000405444 N4BP2Q86UW6 1770 aaPredicted RBP22.52■■□□□ 1.2
TBC1D1-204ENST00000405444 A0A087WZG4 1122 aa22.51■■□□□ 1.19
TBC1D1-204ENST00000405444 USPL1Q5W0Q7 1092 aa22.51■■□□□ 1.19
TBC1D1-204ENST00000405444 FMNL2Q96PY5 1086 aa22.51■■□□□ 1.19
TBC1D1-204ENST00000405444 ATP10DQ9P241 1426 aa22.5■■□□□ 1.19
TBC1D1-204ENST00000405444 BRCA1P38398 1863 aaKnown RBP22.5■■□□□ 1.19
TBC1D1-204ENST00000405444 A0A0G2JLW4 131 aa22.5■■□□□ 1.19
TBC1D1-204ENST00000405444 POLRMTO00411 1230 aaKnown RBP22.5■■□□□ 1.19
TBC1D1-204ENST00000405444 HTATSF1O43719 755 aaKnown RBP22.5■■□□□ 1.19
TBC1D1-204ENST00000405444 DDR1Q08345 913 aa22.5■■□□□ 1.19
TBC1D1-204ENST00000405444 RTF1Q92541 710 aaKnown RBP22.5■■□□□ 1.19
TBC1D1-204ENST00000405444 ZNF496Q96IT1 587 aaPredicted RBP22.5■■□□□ 1.19
TBC1D1-204ENST00000405444 DPEP1P16444 411 aa22.49■■□□□ 1.19
TBC1D1-204ENST00000405444 BCS1LQ9Y276 419 aa22.49■■□□□ 1.19
TBC1D1-204ENST00000405444 BTBD11A6QL63 1104 aa22.48■■□□□ 1.19
TBC1D1-204ENST00000405444 EIF5P55010 431 aaKnown RBP22.48■■□□□ 1.19
TBC1D1-204ENST00000405444 NEFMP07197 916 aa22.47■■□□□ 1.19
TBC1D1-204ENST00000405444 PIM2Q9P1W9 311 aa22.47■■□□□ 1.19
TBC1D1-204ENST00000405444 WWC3Q9ULE0 1092 aa22.47■■□□□ 1.19
TBC1D1-204ENST00000405444 CANXP27824 592 aaKnown RBP22.46■■□□□ 1.19
TBC1D1-204ENST00000405444 GPBP1L1Q9HC44 474 aaPredicted RBP22.46■■□□□ 1.19
TBC1D1-204ENST00000405444 NRXN2Q9P2S2 1712 aa22.45■■□□□ 1.19
TBC1D1-204ENST00000405444 ARFGEF1Q9Y6D6 1849 aa22.45■■□□□ 1.19
TBC1D1-204ENST00000405444 KCNA3P22001 575 aa22.45■■□□□ 1.18
TBC1D1-204ENST00000405444 IL6STP40189 918 aaPredicted RBP22.45■■□□□ 1.18
TBC1D1-204ENST00000405444 NFIXQ14938 502 aa22.45■■□□□ 1.18
TBC1D1-204ENST00000405444 NPM2Q86SE8 214 aaKnown RBP22.44■■□□□ 1.18
TBC1D1-204ENST00000405444 DALRD3Q5D0E6 543 aaKnown RBP22.43■■□□□ 1.18
TBC1D1-204ENST00000405444 PNNQ9H307 717 aaKnown RBP22.43■■□□□ 1.18
TBC1D1-204ENST00000405444 BCL2L12Q9HB09 334 aa22.43■■□□□ 1.18
TBC1D1-204ENST00000405444 SCN7AQ01118 1682 aa22.42■■□□□ 1.18
TBC1D1-204ENST00000405444 AFDNP55196 1824 aaKnown RBP22.41■■□□□ 1.18
TBC1D1-204ENST00000405444 SERPINB2P05120 415 aa22.4■■□□□ 1.18
TBC1D1-204ENST00000405444 ARHGAP27Q6ZUM4 889 aa22.4■■□□□ 1.18
TBC1D1-204ENST00000405444 MCM10Q7L590 875 aa22.4■■□□□ 1.18
TBC1D1-204ENST00000405444 SNRPA1P09661 255 aaKnown RBP22.39■■□□□ 1.17
TBC1D1-204ENST00000405444 RALBP1Q15311 655 aa22.39■■□□□ 1.17
TBC1D1-204ENST00000405444 PDZRN3Q9UPQ7 1066 aa22.39■■□□□ 1.17
TBC1D1-204ENST00000405444 SENP3-EIF4A1A0A087X0R7 540 aa22.37■■□□□ 1.17
TBC1D1-204ENST00000405444 KCNQ3O43525 872 aa22.37■■□□□ 1.17
TBC1D1-204ENST00000405444 TAF7Q15545 349 aaPredicted RBP22.37■■□□□ 1.17
TBC1D1-204ENST00000405444 PNISRQ8TF01 805 aaKnown RBP22.37■■□□□ 1.17
TBC1D1-204ENST00000405444 DLEC1Q9Y238 1755 aa22.36■■□□□ 1.17
TBC1D1-204ENST00000405444 RGL2O15211 777 aa22.36■■□□□ 1.17
TBC1D1-204ENST00000405444 A1BGP04217 495 aa22.36■■□□□ 1.17
TBC1D1-204ENST00000405444 CHRNA5P30532 468 aa22.36■■□□□ 1.17
TBC1D1-204ENST00000405444 CARMIL3Q8ND23 1372 aa22.36■■□□□ 1.17
TBC1D1-204ENST00000405444 PLEKHF1Q96S99 279 aa22.35■■□□□ 1.17
TBC1D1-204ENST00000405444 TBC1D2BQ9UPU7 963 aa22.35■■□□□ 1.17
TBC1D1-204ENST00000405444 ZNF330Q9Y3S2 320 aaPredicted RBP22.35■■□□□ 1.17
TBC1D1-204ENST00000405444 TBC1D9BQ66K14 1250 aa22.34■■□□□ 1.17
TBC1D1-204ENST00000405444 ZNF526Q8TF50 670 aaPredicted RBP22.34■■□□□ 1.17
TBC1D1-204ENST00000405444 USP16Q9Y5T5 823 aa22.34■■□□□ 1.17
TBC1D1-204ENST00000405444 MAPK8IP3Q9UPT6 1336 aa22.33■■□□□ 1.17
TBC1D1-204ENST00000405444 BCORQ6W2J9 1755 aa22.33■■□□□ 1.17
TBC1D1-204ENST00000405444 CAMTA2O94983 1202 aa22.33■■□□□ 1.17
TBC1D1-204ENST00000405444 DCTN1Q14203 1278 aa22.33■■□□□ 1.17
TBC1D1-204ENST00000405444 NFE2L2Q16236 605 aa22.33■■□□□ 1.17
TBC1D1-204ENST00000405444 CLEC4GQ6UXB4 293 aa22.33■■□□□ 1.17
TBC1D1-204ENST00000405444 BICDL1Q6ZP65 573 aa22.33■■□□□ 1.17
TBC1D1-204ENST00000405444 DLG5Q8TDM6 1919 aa22.33■■□□□ 1.16
TBC1D1-204ENST00000405444 H0YIN7 160 aa22.32■■□□□ 1.16
TBC1D1-204ENST00000405444 PDE6BP35913 854 aa22.32■■□□□ 1.16
TBC1D1-204ENST00000405444 DZIP3Q86Y13 1208 aaKnown RBP22.32■■□□□ 1.16
TBC1D1-204ENST00000405444 SETDB2Q96T68 719 aa22.32■■□□□ 1.16
TBC1D1-204ENST00000405444 BRIP1Q9BX63 1249 aa22.32■■□□□ 1.16
TBC1D1-204ENST00000405444 ZNF652Q9Y2D9 606 aa22.32■■□□□ 1.16
TBC1D1-204ENST00000405444 TTLL6Q8N841 843 aa22.31■■□□□ 1.16
TBC1D1-204ENST00000405444 C9orf131Q5VYM1 1079 aa22.3■■□□□ 1.16
TBC1D1-204ENST00000405444 C2CD5Q86YS7 1000 aa22.3■■□□□ 1.16
TBC1D1-204ENST00000405444 LAMB4A4D0S4 1761 aa22.3■■□□□ 1.16
TBC1D1-204ENST00000405444 ZC3H4Q9UPT8 1303 aaKnown RBP22.3■■□□□ 1.16
TBC1D1-204ENST00000405444 KDM3BQ7LBC6 1761 aa22.29■■□□□ 1.16
TBC1D1-204ENST00000405444 KIF3CO14782 793 aa22.28■■□□□ 1.16
TBC1D1-204ENST00000405444 PRR5LQ6MZQ0 368 aa22.28■■□□□ 1.16
TBC1D1-204ENST00000405444 CNBD1Q8NA66 436 aa22.28■■□□□ 1.16
TBC1D1-204ENST00000405444 PRAMEF22A3QJZ6 481 aa22.27■■□□□ 1.16
TBC1D1-204ENST00000405444 ST5P78524 1137 aa22.27■■□□□ 1.16
TBC1D1-204ENST00000405444 MYBBP1AQ9BQG0 1328 aaKnown RBP22.27■■□□□ 1.16
TBC1D1-204ENST00000405444 ANKRD31Q8N7Z5 1873 aa22.26■■□□□ 1.15
TBC1D1-204ENST00000405444 NPHP1O15259 732 aa22.26■■□□□ 1.15
TBC1D1-204ENST00000405444 RNF181Q9P0P0 153 aa22.26■■□□□ 1.15
TBC1D1-204ENST00000405444 SBF1O95248 1867 aa22.26■■□□□ 1.15
TBC1D1-204ENST00000405444 KDM2BQ8NHM5 1336 aa22.25■■□□□ 1.15
TBC1D1-204ENST00000405444 LMOD3Q0VAK6 560 aa22.24■■□□□ 1.15
TBC1D1-204ENST00000405444 DDX10Q13206 875 aaKnown RBP22.24■■□□□ 1.15
TBC1D1-204ENST00000405444 BABAM1Q9NWV8 329 aa22.24■■□□□ 1.15
TBC1D1-204ENST00000405444 NBPF26B4DH59 902 aa22.23■■□□□ 1.15
TBC1D1-204ENST00000405444 LMNB1P20700 586 aa22.23■■□□□ 1.15
TBC1D1-204ENST00000405444 EIF4A1P60842 406 aaKnown RBP22.23■■□□□ 1.15
TBC1D1-204ENST00000405444 NBPF10Q6P3W6 841 aaKnown RBP22.23■■□□□ 1.15
TBC1D1-204ENST00000405444 NBPF15Q8N660 670 aa22.23■■□□□ 1.15
TBC1D1-204ENST00000405444 MIS18AQ9NYP9 233 aa22.23■■□□□ 1.15
TBC1D1-204ENST00000405444 TOMM70O94826 608 aa22.22■■□□□ 1.15
TBC1D1-204ENST00000405444 HSPA6P17066 643 aa22.22■■□□□ 1.15
TBC1D1-204ENST00000405444 PIP4K2AP48426 406 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms