RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PSMA6P60900 246 aaKnown RBP6.68□□□□□ -1.34
HMGB1P17-201ENST00000403495 ARHGAP4P98171 946 aa6.68□□□□□ -1.34
HMGB1P17-201ENST00000403495 FKBP4Q02790 459 aaKnown RBP eCLIP6.68□□□□□ -1.34
HMGB1P17-201ENST00000403495 C6orf118Q5T5N4 469 aa6.68□□□□□ -1.34
HMGB1P17-201ENST00000403495 C16orf46Q6P387 395 aa6.68□□□□□ -1.34
HMGB1P17-201ENST00000403495 ZNF295-AS1Q8N0V1 137 aa6.68□□□□□ -1.34
HMGB1P17-201ENST00000403495 ZSCAN10Q96SZ4 725 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P17-201ENST00000403495 SERTM1A2A2V5 107 aa6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 TNFRSF10BO14763 440 aa6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 CAPN5O15484 640 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 MAPK1P28482 360 aa6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 NOS2P35228 1153 aa6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 TXLNAP40222 546 aa6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 PHKA2P46019 1235 aa6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 RANGAP1P46060 587 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 PLA2G4AP47712 749 aa6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 TMEM214Q6NUQ4 689 aaKnown RBP6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 L3MBTL2Q969R5 705 aa6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 COL26A1Q96A83 441 aa6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 KLRG1Q96E93 195 aa6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 POLMQ9NP87 494 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 PDZRN3Q9UPQ7 1066 aa6.67□□□□□ -1.34
HMGB1P17-201ENST00000403495 ANKRD33BA6NCL7 494 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 FAM187AA6NFU0 413 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 ZBTB39O15060 712 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 PRR20EP86478 221 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 PRR20CP86479 221 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 PRR20DP86480 221 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 PRR20BP86481 221 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 PRR20AP86496 221 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 SF3B2Q13435 895 aaKnown RBP6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 SLC27A3Q5K4L6 730 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 ATCAYQ86WG3 371 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 LINC00528Q8N1L1 170 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 PHACTR1Q9C0D0 580 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 KLK14Q9P0G3 267 aa6.66□□□□□ -1.34
HMGB1P17-201ENST00000403495 BMP1P13497 986 aa6.65□□□□□ -1.34
HMGB1P17-201ENST00000403495 TEAD4Q15561 434 aa6.65□□□□□ -1.34
HMGB1P17-201ENST00000403495 C4orf17Q53FE4 359 aa6.65□□□□□ -1.34
HMGB1P17-201ENST00000403495 PPARGC1BQ86YN6 1023 aaKnown RBP6.65□□□□□ -1.34
HMGB1P17-201ENST00000403495 ALDH16A1Q8IZ83 802 aa6.65□□□□□ -1.34
HMGB1P17-201ENST00000403495 CCDC87Q9NVE4 849 aa6.65□□□□□ -1.34
HMGB1P17-201ENST00000403495 CHMP3Q9Y3E7 222 aa6.65□□□□□ -1.34
HMGB1P17-201ENST00000403495 BMP2P12643 396 aa6.64□□□□□ -1.35
HMGB1P17-201ENST00000403495 EIF1AXP47813 144 aaKnown RBP6.64□□□□□ -1.35
HMGB1P17-201ENST00000403495 TAGLNQ01995 201 aaKnown RBP6.64□□□□□ -1.35
HMGB1P17-201ENST00000403495 DGKZQ13574 1117 aa6.64□□□□□ -1.35
HMGB1P17-201ENST00000403495 PRICKLE2Q7Z3G6 844 aa6.64□□□□□ -1.35
HMGB1P17-201ENST00000403495 STAG2Q8N3U4 1231 aa6.64□□□□□ -1.35
HMGB1P17-201ENST00000403495 NBPF15Q8N660 670 aa6.64□□□□□ -1.35
HMGB1P17-201ENST00000403495 AIDAQ96BJ3 306 aa6.64□□□□□ -1.35
HMGB1P17-201ENST00000403495 TSEN34Q9BSV6 310 aaKnown RBP6.64□□□□□ -1.35
HMGB1P17-201ENST00000403495 NIFKQ9BYG3 293 aaKnown RBP6.64□□□□□ -1.35
HMGB1P17-201ENST00000403495 GRIP2Q9C0E4 1043 aa6.64□□□□□ -1.35
HMGB1P17-201ENST00000403495 UNCXA6NJT0 531 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 FIGNL2A6NMB9 653 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 SPINT1O43278 529 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 RHOQP17081 205 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 POU4F2Q12837 409 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 AAMPQ13685 434 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 POTEAQ6S8J7 498 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 NPAS4Q8IUM7 802 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 ETFBKMTQ8IXQ9 262 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 RHBDD1Q8TEB9 315 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 STIM2Q9P246 746 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 DCTN4Q9UJW0 460 aa6.63□□□□□ -1.35
HMGB1P17-201ENST00000403495 FAM13AO94988 1023 aa6.62□□□□□ -1.35
HMGB1P17-201ENST00000403495 GTF2E1P29083 439 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P17-201ENST00000403495 RNF144AP50876 292 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P17-201ENST00000403495 GNASQ5JWF2 1037 aa6.62□□□□□ -1.35
HMGB1P17-201ENST00000403495 FZD6O60353 706 aa6.61□□□□□ -1.35
HMGB1P17-201ENST00000403495 UPP2O95045 317 aa6.61□□□□□ -1.35
HMGB1P17-201ENST00000403495 NPR3P17342 541 aa6.61□□□□□ -1.35
HMGB1P17-201ENST00000403495 MRPL14Q6P1L8 145 aaKnown RBP6.61□□□□□ -1.35
HMGB1P17-201ENST00000403495 RNF217Q8TC41 542 aa6.61□□□□□ -1.35
HMGB1P17-201ENST00000403495 GIPC2Q8TF65 315 aa6.61□□□□□ -1.35
HMGB1P17-201ENST00000403495 MYO19Q96H55 970 aa6.61□□□□□ -1.35
HMGB1P17-201ENST00000403495 HSH2DQ96JZ2 352 aa6.61□□□□□ -1.35
HMGB1P17-201ENST00000403495 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMGB1P17-201ENST00000403495 HIRAP54198 1017 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P17-201ENST00000403495 RTN1Q16799 776 aa6.6□□□□□ -1.35
HMGB1P17-201ENST00000403495 TMC7Q7Z402 723 aa6.6□□□□□ -1.35
HMGB1P17-201ENST00000403495 TRIM46Q7Z4K8 759 aa6.6□□□□□ -1.35
HMGB1P17-201ENST00000403495 TMC1Q8TDI8 760 aa6.6□□□□□ -1.35
HMGB1P17-201ENST00000403495 IFT43Q96FT9 208 aa6.6□□□□□ -1.35
HMGB1P17-201ENST00000403495 BCL2L13Q9BXK5 485 aa6.6□□□□□ -1.35
HMGB1P17-201ENST00000403495 BCS1LQ9Y276 419 aa6.6□□□□□ -1.35
HMGB1P17-201ENST00000403495 GPC1P35052 558 aa6.59□□□□□ -1.35
HMGB1P17-201ENST00000403495 DNM1Q05193 864 aaKnown RBP6.59□□□□□ -1.35
HMGB1P17-201ENST00000403495 C11orf91Q3C1V1 193 aa6.59□□□□□ -1.35
HMGB1P17-201ENST00000403495 ZNF280CQ8ND82 737 aa6.59□□□□□ -1.35
HMGB1P17-201ENST00000403495 RHPN1Q8TCX5 695 aa6.59□□□□□ -1.35
HMGB1P17-201ENST00000403495 ASB16Q96NS5 453 aa6.59□□□□□ -1.35
HMGB1P17-201ENST00000403495 BRPF3Q9ULD4 1205 aa6.59□□□□□ -1.35
HMGB1P17-201ENST00000403495 USP20Q9Y2K6 914 aa6.59□□□□□ -1.35
HMGB1P17-201ENST00000403495 TTLL8A6PVC2 850 aa6.58□□□□□ -1.36
HMGB1P17-201ENST00000403495 NDUFB5O43674 189 aa6.58□□□□□ -1.36
HMGB1P17-201ENST00000403495 ZNF16P17020 682 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P17-201ENST00000403495 BRD2P25440 801 aaKnown RBP6.58□□□□□ -1.36
HMGB1P17-201ENST00000403495 NBPF10Q6P3W6 841 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms