RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SPATA31A5Q5VU36 1347 aa32.2■■■□□ 2.75
CPNE1-205ENST00000401607 SPATA31A7Q8IWB4 1347 aa32.2■■■□□ 2.75
CPNE1-205ENST00000401607 PI4KAP2A4QPH2 592 aa32.2■■■□□ 2.75
CPNE1-205ENST00000401607 PI4KAP1Q8N8J0 262 aa32.2■■■□□ 2.75
CPNE1-205ENST00000401607 USP16Q9Y5T5 823 aa32.2■■■□□ 2.75
CPNE1-205ENST00000401607 EXOC5O00471 708 aa32.19■■■□□ 2.74
CPNE1-205ENST00000401607 PDE4AP27815 886 aa32.19■■■□□ 2.74
CPNE1-205ENST00000401607 ANKRD44Q8N8A2 993 aa32.19■■■□□ 2.74
CPNE1-205ENST00000401607 DNAAF4Q8WXU2 420 aa32.19■■■□□ 2.74
CPNE1-205ENST00000401607 CDCA7Q9BWT1 371 aaPredicted RBP32.19■■■□□ 2.74
CPNE1-205ENST00000401607 CEP85Q6P2H3 762 aa32.19■■■□□ 2.74
CPNE1-205ENST00000401607 RPAP2Q8IXW5 612 aaPredicted RBP32.18■■■□□ 2.74
CPNE1-205ENST00000401607 GCC1Q96CN9 775 aa32.17■■■□□ 2.74
CPNE1-205ENST00000401607 BACH2Q9BYV9 841 aa32.17■■■□□ 2.74
CPNE1-205ENST00000401607 TMOD3Q9NYL9 352 aa32.17■■■□□ 2.74
CPNE1-205ENST00000401607 ITGB4P16144 1822 aa32.16■■■□□ 2.74
CPNE1-205ENST00000401607 BEND3Q5T5X7 828 aa32.16■■■□□ 2.74
CPNE1-205ENST00000401607 SRCIN1Q9C0H9 1055 aa32.15■■■□□ 2.74
CPNE1-205ENST00000401607 GNAI3P08754 354 aa32.14■■■□□ 2.74
CPNE1-205ENST00000401607 NUCB1Q02818 461 aa32.14■■■□□ 2.74
CPNE1-205ENST00000401607 KSR2Q6VAB6 950 aa32.14■■■□□ 2.74
CPNE1-205ENST00000401607 LRP10Q7Z4F1 713 aa32.14■■■□□ 2.74
CPNE1-205ENST00000401607 UNC5CLQ8IV45 518 aa32.14■■■□□ 2.74
CPNE1-205ENST00000401607 USP44Q9H0E7 712 aa32.14■■■□□ 2.74
CPNE1-205ENST00000401607 MAP3K2Q9Y2U5 619 aa32.13■■■□□ 2.73
CPNE1-205ENST00000401607 SPATA31A6Q5VVP1 1343 aa32.13■■■□□ 2.73
CPNE1-205ENST00000401607 BCL9LQ86UU0 1499 aa32.13■■■□□ 2.73
CPNE1-205ENST00000401607 GNAI2P04899 355 aa32.12■■■□□ 2.73
CPNE1-205ENST00000401607 PIGBQ92521 554 aa32.12■■■□□ 2.73
CPNE1-205ENST00000401607 C8orf37Q96NL8 207 aa32.12■■■□□ 2.73
CPNE1-205ENST00000401607 MYL6BP14649 208 aa32.12■■■□□ 2.73
CPNE1-205ENST00000401607 BARGINQ6ZT62 677 aa32.12■■■□□ 2.73
CPNE1-205ENST00000401607 CCDC9Q9Y3X0 531 aaKnown RBP32.1■■■□□ 2.73
CPNE1-205ENST00000401607 DDB1Q16531 1140 aa32.09■■■□□ 2.73
CPNE1-205ENST00000401607 NGLY1Q96IV0 654 aa32.09■■■□□ 2.73
CPNE1-205ENST00000401607 DCTPP1Q9H773 170 aa32.09■■■□□ 2.73
CPNE1-205ENST00000401607 PTCD1O75127 700 aaKnown RBP32.09■■■□□ 2.73
CPNE1-205ENST00000401607 DDX58O95786 925 aaKnown RBP32.09■■■□□ 2.73
CPNE1-205ENST00000401607 AIMP1Q12904 312 aaKnown RBP32.09■■■□□ 2.73
CPNE1-205ENST00000401607 BCL9O00512 1426 aa32.08■■■□□ 2.73
CPNE1-205ENST00000401607 CHD1LQ86WJ1 897 aa32.08■■■□□ 2.73
CPNE1-205ENST00000401607 XAGE3Q8WTP9 111 aa32.08■■■□□ 2.73
CPNE1-205ENST00000401607 DOT1LQ8TEK3 1739 aa32.08■■■□□ 2.73
CPNE1-205ENST00000401607 PIP4K2AP48426 406 aaPredicted RBP32.07■■■□□ 2.72
CPNE1-205ENST00000401607 FAM161AQ3B820 660 aa32.07■■■□□ 2.72
CPNE1-205ENST00000401607 C8orf34Q49A92 452 aa32.07■■■□□ 2.72
CPNE1-205ENST00000401607 ERBB4Q15303 1308 aa32.07■■■□□ 2.72
CPNE1-205ENST00000401607 FNBP4Q8N3X1 1017 aaPredicted RBP32.07■■■□□ 2.72
CPNE1-205ENST00000401607 ASAP1Q9ULH1 1129 aa32.07■■■□□ 2.72
CPNE1-205ENST00000401607 VPS72Q15906 364 aa32.06■■■□□ 2.72
CPNE1-205ENST00000401607 COPS6Q7L5N1 327 aa32.06■■■□□ 2.72
CPNE1-205ENST00000401607 LNPKQ9C0E8 428 aa32.06■■■□□ 2.72
CPNE1-205ENST00000401607 ATG3Q9NT62 314 aa32.06■■■□□ 2.72
CPNE1-205ENST00000401607 UBTFL1P0CB47 393 aaPredicted RBP32.05■■■□□ 2.72
CPNE1-205ENST00000401607 HSPA1LP34931 641 aa32.05■■■□□ 2.72
CPNE1-205ENST00000401607 ANKRD45Q5TZF3 282 aa32.05■■■□□ 2.72
CPNE1-205ENST00000401607 LRRFIP2Q9Y608 721 aaKnown RBP32.04■■■□□ 2.72
CPNE1-205ENST00000401607 ALDH1L1O75891 902 aa32.04■■■□□ 2.72
CPNE1-205ENST00000401607 NBPF26B4DH59 902 aa32.03■■■□□ 2.72
CPNE1-205ENST00000401607 NBPF14Q5TI25 921 aa32.03■■■□□ 2.72
CPNE1-205ENST00000401607 NBPF10Q6P3W6 841 aaKnown RBP32.03■■■□□ 2.72
CPNE1-205ENST00000401607 NBPF15Q8N660 670 aa32.03■■■□□ 2.72
CPNE1-205ENST00000401607 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.02■■■□□ 2.72
CPNE1-205ENST00000401607 HMMRO75330 724 aa32.02■■■□□ 2.72
CPNE1-205ENST00000401607 NBPF7P0C2Y1 421 aaPredicted RBP32.02■■■□□ 2.72
CPNE1-205ENST00000401607 MARCH10Q8NA82 808 aaPredicted RBP32.02■■■□□ 2.72
CPNE1-205ENST00000401607 RIC3Q7Z5B4 369 aa32.01■■■□□ 2.71
CPNE1-205ENST00000401607 LINS1Q8NG48 757 aa32.01■■■□□ 2.71
CPNE1-205ENST00000401607 ATP8B2P98198 1209 aa32■■■□□ 2.71
CPNE1-205ENST00000401607 CWF19L2Q2TBE0 894 aaKnown RBP31.99■■■□□ 2.71
CPNE1-205ENST00000401607 VSIG10Q8N0Z9 540 aa31.99■■■□□ 2.71
CPNE1-205ENST00000401607 PNMA6EA0A0J9YXQ4 647 aa31.98■■■□□ 2.71
CPNE1-205ENST00000401607 A1BGP04217 495 aa31.98■■■□□ 2.71
CPNE1-205ENST00000401607 PRIM1P49642 420 aaKnown RBP31.98■■■□□ 2.71
CPNE1-205ENST00000401607 ANKRD13DQ6ZTN6 518 aa31.98■■■□□ 2.71
CPNE1-205ENST00000401607 ARFGEF2Q9Y6D5 1785 aa31.97■■■□□ 2.71
CPNE1-205ENST00000401607 FAM98CQ17RN3 349 aaKnown RBP31.97■■■□□ 2.71
CPNE1-205ENST00000401607 IGKV5-2P06315 115 aa31.96■■■□□ 2.71
CPNE1-205ENST00000401607 SYTL4Q96C24 671 aaPredicted RBP31.96■■■□□ 2.71
CPNE1-205ENST00000401607 METTL22Q9BUU2 404 aaPredicted RBP31.96■■■□□ 2.71
CPNE1-205ENST00000401607 IBTKQ9P2D0 1353 aaPredicted RBP31.96■■■□□ 2.71
CPNE1-205ENST00000401607 USP21Q9UK80 565 aa31.96■■■□□ 2.71
CPNE1-205ENST00000401607 DNAJC10Q8IXB1 793 aa31.94■■■□□ 2.7
CPNE1-205ENST00000401607 RBM42Q9BTD8 480 aaKnown RBP31.94■■■□□ 2.7
CPNE1-205ENST00000401607 MYD88Q99836 296 aa31.93■■■□□ 2.7
CPNE1-205ENST00000401607 TEX13AQ9BXU3 409 aaPredicted RBP31.93■■■□□ 2.7
CPNE1-205ENST00000401607 UTYO14607 1347 aa31.93■■■□□ 2.7
CPNE1-205ENST00000401607 NEXNQ0ZGT2 675 aa31.92■■■□□ 2.7
CPNE1-205ENST00000401607 PLBD2Q8NHP8 589 aa31.92■■■□□ 2.7
CPNE1-205ENST00000401607 SLC4A9Q96Q91 983 aa31.92■■■□□ 2.7
CPNE1-205ENST00000401607 C9orf78Q9NZ63 289 aaPredicted RBP31.92■■■□□ 2.7
CPNE1-205ENST00000401607 NEURL1BA8MQ27 555 aa31.91■■■□□ 2.7
CPNE1-205ENST00000401607 NUP188Q5SRE5 1749 aa31.91■■■□□ 2.7
CPNE1-205ENST00000401607 GRM8O00222 908 aa31.91■■■□□ 2.7
CPNE1-205ENST00000401607 SSH3Q8TE77 659 aa31.91■■■□□ 2.7
CPNE1-205ENST00000401607 TTLL7Q6ZT98 887 aa31.9■■■□□ 2.7
CPNE1-205ENST00000401607 ACSBG1Q96GR2 724 aa31.9■■■□□ 2.7
CPNE1-205ENST00000401607 KAT6BQ8WYB5 2073 aa31.9■■■□□ 2.7
CPNE1-205ENST00000401607 POLA2Q14181 598 aa31.89■■■□□ 2.7
CPNE1-205ENST00000401607 TJP1Q07157 1748 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms