RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 MBIPQ9NS73 344 aa19.97■□□□□ 0.79
CHRFAM7A-203ENST00000401522 ZBTB40Q9NUA8 1239 aa19.97■□□□□ 0.79
CHRFAM7A-203ENST00000401522 PRIM1P49642 420 aaKnown RBP19.96■□□□□ 0.79
CHRFAM7A-203ENST00000401522 FAM196AQ6ZSG2 479 aa19.96■□□□□ 0.79
CHRFAM7A-203ENST00000401522 TMOD3Q9NYL9 352 aa19.96■□□□□ 0.79
CHRFAM7A-203ENST00000401522 MIS18AQ9NYP9 233 aa19.96■□□□□ 0.79
CHRFAM7A-203ENST00000401522 DOT1LQ8TEK3 1739 aa19.96■□□□□ 0.79
CHRFAM7A-203ENST00000401522 ITGB4P16144 1822 aa19.96■□□□□ 0.79
CHRFAM7A-203ENST00000401522 FRAT2O75474 233 aaPredicted RBP19.96■□□□□ 0.79
CHRFAM7A-203ENST00000401522 TSPYL4Q9UJ04 414 aa19.96■□□□□ 0.79
CHRFAM7A-203ENST00000401522 PIGBQ92521 554 aa19.95■□□□□ 0.78
CHRFAM7A-203ENST00000401522 ACSBG1Q96GR2 724 aa19.94■□□□□ 0.78
CHRFAM7A-203ENST00000401522 SYTL4Q96C24 671 aaPredicted RBP19.94■□□□□ 0.78
CHRFAM7A-203ENST00000401522 CHMP4BQ9H444 224 aaKnown RBP19.93■□□□□ 0.78
CHRFAM7A-203ENST00000401522 KCNQ2O43526 872 aa19.92■□□□□ 0.78
CHRFAM7A-203ENST00000401522 ZNF790Q6PG37 636 aa19.92■□□□□ 0.78
CHRFAM7A-203ENST00000401522 KDM3BQ7LBC6 1761 aa19.92■□□□□ 0.78
CHRFAM7A-203ENST00000401522 KAT6BQ8WYB5 2073 aa19.91■□□□□ 0.78
CHRFAM7A-203ENST00000401522 ARHGAP45Q92619 1136 aa19.91■□□□□ 0.78
CHRFAM7A-203ENST00000401522 SBF2Q86WG5 1849 aa19.91■□□□□ 0.78
CHRFAM7A-203ENST00000401522 SLC39A6Q13433 755 aa19.9■□□□□ 0.78
CHRFAM7A-203ENST00000401522 NHSQ6T4R5 1651 aa19.9■□□□□ 0.78
CHRFAM7A-203ENST00000401522 KCNQ3O43525 872 aa19.9■□□□□ 0.78
CHRFAM7A-203ENST00000401522 TBC1D2Q9BYX2 928 aa19.89■□□□□ 0.77
CHRFAM7A-203ENST00000401522 ANTXR1Q9H6X2 564 aa19.89■□□□□ 0.77
CHRFAM7A-203ENST00000401522 ATG3Q9NT62 314 aa19.89■□□□□ 0.77
CHRFAM7A-203ENST00000401522 EIF4A1P60842 406 aaKnown RBP19.88■□□□□ 0.77
CHRFAM7A-203ENST00000401522 NUCB1Q02818 461 aa19.88■□□□□ 0.77
CHRFAM7A-203ENST00000401522 TTC5Q8N0Z6 440 aa19.88■□□□□ 0.77
CHRFAM7A-203ENST00000401522 BCL11BQ9C0K0 894 aaPredicted RBP19.88■□□□□ 0.77
CHRFAM7A-203ENST00000401522 ASAP1Q9ULH1 1129 aa19.88■□□□□ 0.77
CHRFAM7A-203ENST00000401522 PAPPAQ13219 1627 aa19.88■□□□□ 0.77
CHRFAM7A-203ENST00000401522 C22orf23Q9BZE7 217 aa19.88■□□□□ 0.77
CHRFAM7A-203ENST00000401522 VAMP4O75379 141 aa19.87■□□□□ 0.77
CHRFAM7A-203ENST00000401522 PTF1AQ7RTS3 328 aa19.87■□□□□ 0.77
CHRFAM7A-203ENST00000401522 MRPL50Q8N5N7 158 aaKnown RBP19.87■□□□□ 0.77
CHRFAM7A-203ENST00000401522 HEG1Q9ULI3 1381 aa19.87■□□□□ 0.77
CHRFAM7A-203ENST00000401522 EP400Q96L91 3159 aa19.87■□□□□ 0.77
CHRFAM7A-203ENST00000401522 C8orf58Q8NAV2 365 aa19.86■□□□□ 0.77
CHRFAM7A-203ENST00000401522 UBR2Q8IWV8 1755 aa19.85■□□□□ 0.77
CHRFAM7A-203ENST00000401522 ZNF496Q96IT1 587 aaPredicted RBP19.85■□□□□ 0.77
CHRFAM7A-203ENST00000401522 SLKQ9H2G2 1235 aaPredicted RBP19.85■□□□□ 0.77
CHRFAM7A-203ENST00000401522 KRT24Q2M2I5 525 aa19.84■□□□□ 0.77
CHRFAM7A-203ENST00000401522 FMNL2Q96PY5 1086 aa19.84■□□□□ 0.77
CHRFAM7A-203ENST00000401522 TRIM37O94972 964 aa19.84■□□□□ 0.77
CHRFAM7A-203ENST00000401522 MFAP1P55081 439 aaKnown RBP19.84■□□□□ 0.77
CHRFAM7A-203ENST00000401522 TSPYL6Q8N831 410 aa19.84■□□□□ 0.77
CHRFAM7A-203ENST00000401522 SMARCC1Q92922 1105 aaPredicted RBP19.84■□□□□ 0.77
CHRFAM7A-203ENST00000401522 KCPQ6ZWJ8 1503 aa19.84■□□□□ 0.77
CHRFAM7A-203ENST00000401522 SOS1Q07889 1333 aaPredicted RBP19.83■□□□□ 0.77
CHRFAM7A-203ENST00000401522 BTAF1O14981 1849 aa19.83■□□□□ 0.77
CHRFAM7A-203ENST00000401522 TWISTNBQ3B726 338 aaPredicted RBP19.83■□□□□ 0.77
CHRFAM7A-203ENST00000401522 CHD1LQ86WJ1 897 aa19.83■□□□□ 0.77
CHRFAM7A-203ENST00000401522 ZBTB7BO15156 539 aaPredicted RBP19.82■□□□□ 0.76
CHRFAM7A-203ENST00000401522 GIGYF1O75420 1035 aaPredicted RBP19.82■□□□□ 0.76
CHRFAM7A-203ENST00000401522 HOXB7P09629 217 aa19.82■□□□□ 0.76
CHRFAM7A-203ENST00000401522 GCC1Q96CN9 775 aa19.82■□□□□ 0.76
CHRFAM7A-203ENST00000401522 ELL2O00472 640 aaPredicted RBP19.82■□□□□ 0.76
CHRFAM7A-203ENST00000401522 PTCD1O75127 700 aaKnown RBP19.82■□□□□ 0.76
CHRFAM7A-203ENST00000401522 VSIG10Q8N0Z9 540 aa19.82■□□□□ 0.76
CHRFAM7A-203ENST00000401522 ABCC4O15439 1325 aa19.82■□□□□ 0.76
CHRFAM7A-203ENST00000401522 IL27Q8NEV9 243 aa19.81■□□□□ 0.76
CHRFAM7A-203ENST00000401522 PALLDQ8WX93 1383 aa19.81■□□□□ 0.76
CHRFAM7A-203ENST00000401522 SNRPA1P09661 255 aaKnown RBP19.8■□□□□ 0.76
CHRFAM7A-203ENST00000401522 API5Q9BZZ5 524 aaKnown RBP19.79■□□□□ 0.76
CHRFAM7A-203ENST00000401522 LNPKQ9C0E8 428 aa19.79■□□□□ 0.76
CHRFAM7A-203ENST00000401522 BMP2KLQ5H9B9 411 aa19.78■□□□□ 0.76
CHRFAM7A-203ENST00000401522 RBM42Q9BTD8 480 aaKnown RBP19.78■□□□□ 0.76
CHRFAM7A-203ENST00000401522 LOC102724428A0A0B4J2F2 783 aa19.78■□□□□ 0.76
CHRFAM7A-203ENST00000401522 SIK1P57059 783 aa19.78■□□□□ 0.76
CHRFAM7A-203ENST00000401522 SLC4A9Q96Q91 983 aa19.78■□□□□ 0.76
CHRFAM7A-203ENST00000401522 PRAMEF22A3QJZ6 481 aa19.77■□□□□ 0.76
CHRFAM7A-203ENST00000401522 RBM25P49756 843 aaKnown RBP19.77■□□□□ 0.76
CHRFAM7A-203ENST00000401522 TEX13AQ9BXU3 409 aaPredicted RBP19.77■□□□□ 0.76
CHRFAM7A-203ENST00000401522 CHMP4AQ9BY43 222 aa19.77■□□□□ 0.76
CHRFAM7A-203ENST00000401522 ZNF831Q5JPB2 1677 aa19.76■□□□□ 0.75
CHRFAM7A-203ENST00000401522 HSCBQ8IWL3 235 aa19.76■□□□□ 0.75
CHRFAM7A-203ENST00000401522 USP16Q9Y5T5 823 aa19.76■□□□□ 0.75
CHRFAM7A-203ENST00000401522 PLSCR1O15162 318 aa19.75■□□□□ 0.75
CHRFAM7A-203ENST00000401522 CHMP5Q9NZZ3 219 aa19.75■□□□□ 0.75
CHRFAM7A-203ENST00000401522 BRPF3Q9ULD4 1205 aa19.75■□□□□ 0.75
CHRFAM7A-203ENST00000401522 LY75O60449 1722 aa19.75■□□□□ 0.75
CHRFAM7A-203ENST00000401522 ATP6V1AP38606 617 aa19.74■□□□□ 0.75
CHRFAM7A-203ENST00000401522 C5P01031 1676 aa19.74■□□□□ 0.75
CHRFAM7A-203ENST00000401522 TNS1Q9HBL0 1735 aaKnown RBP19.74■□□□□ 0.75
CHRFAM7A-203ENST00000401522 APBA3O96018 575 aa19.74■□□□□ 0.75
CHRFAM7A-203ENST00000401522 HDGFL1Q5TGJ6 251 aa19.74■□□□□ 0.75
CHRFAM7A-203ENST00000401522 ANKRD45Q5TZF3 282 aa19.74■□□□□ 0.75
CHRFAM7A-203ENST00000401522 CCDC30Q5VVM6 783 aa19.74■□□□□ 0.75
CHRFAM7A-203ENST00000401522 CICQ96RK0 1608 aaPredicted RBP19.74■□□□□ 0.75
CHRFAM7A-203ENST00000401522 EIF2S2P20042 333 aaKnown RBP19.73■□□□□ 0.75
CHRFAM7A-203ENST00000401522 SNX21Q969T3 373 aa19.73■□□□□ 0.75
CHRFAM7A-203ENST00000401522 DNAJC10Q8IXB1 793 aa19.72■□□□□ 0.75
CHRFAM7A-203ENST00000401522 LAMB4A4D0S4 1761 aa19.72■□□□□ 0.75
CHRFAM7A-203ENST00000401522 STARD3NLO95772 234 aa19.71■□□□□ 0.75
CHRFAM7A-203ENST00000401522 ITPK1Q13572 414 aa19.71■□□□□ 0.75
CHRFAM7A-203ENST00000401522 CCDC125Q86Z20 511 aa19.71■□□□□ 0.75
CHRFAM7A-203ENST00000401522 C1orf115Q9H7X2 142 aa19.71■□□□□ 0.75
CHRFAM7A-203ENST00000401522 TJP1Q07157 1748 aa19.71■□□□□ 0.75
CHRFAM7A-203ENST00000401522 CYP19A1P11511 503 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms