RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 HOXC9P31274 260 aa10.72□□□□□ -0.69
LINC01139-201ENST00000400946 KLHL40Q2TBA0 621 aa10.72□□□□□ -0.69
LINC01139-201ENST00000400946 PROSER2Q86WR7 435 aaPredicted RBP10.72□□□□□ -0.69
LINC01139-201ENST00000400946 SPRYD3Q8NCJ5 442 aa10.72□□□□□ -0.69
LINC01139-201ENST00000400946 GRPEL1Q9HAV7 217 aa10.72□□□□□ -0.69
LINC01139-201ENST00000400946 TMEM94Q12767 1356 aa10.71□□□□□ -0.69
LINC01139-201ENST00000400946 MCCP23508 829 aa10.71□□□□□ -0.69
LINC01139-201ENST00000400946 FLIIQ13045 1269 aa10.71□□□□□ -0.69
LINC01139-201ENST00000400946 KRT24Q2M2I5 525 aa10.71□□□□□ -0.69
LINC01139-201ENST00000400946 LRRCC1Q9C099 1032 aa10.71□□□□□ -0.69
LINC01139-201ENST00000400946 HDAC5Q9UQL6 1122 aa10.71□□□□□ -0.69
LINC01139-201ENST00000400946 CEMIPQ8WUJ3 1361 aa10.71□□□□□ -0.7
LINC01139-201ENST00000400946 NCAPD2Q15021 1401 aa10.7□□□□□ -0.7
LINC01139-201ENST00000400946 NLRP6P59044 892 aa10.7□□□□□ -0.7
LINC01139-201ENST00000400946 KDM3BQ7LBC6 1761 aa10.7□□□□□ -0.7
LINC01139-201ENST00000400946 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
LINC01139-201ENST00000400946 BAG4O95429 457 aaKnown RBP10.69□□□□□ -0.7
LINC01139-201ENST00000400946 PIP4K2BP78356 416 aa10.69□□□□□ -0.7
LINC01139-201ENST00000400946 PLCB2Q00722 1185 aa10.69□□□□□ -0.7
LINC01139-201ENST00000400946 C16orf71Q8IYS4 520 aaPredicted RBP10.69□□□□□ -0.7
LINC01139-201ENST00000400946 RBM33Q96EV2 1170 aaKnown RBP10.69□□□□□ -0.7
LINC01139-201ENST00000400946 INTS4Q96HW7 963 aaKnown RBP10.69□□□□□ -0.7
LINC01139-201ENST00000400946 CREBZFQ9NS37 354 aa10.69□□□□□ -0.7
LINC01139-201ENST00000400946 LMO7Q8WWI1 1683 aa10.69□□□□□ -0.7
LINC01139-201ENST00000400946 HSP90AB4PQ58FF6 505 aa10.68□□□□□ -0.7
LINC01139-201ENST00000400946 G2E3Q7L622 706 aa10.68□□□□□ -0.7
LINC01139-201ENST00000400946 KCNH5Q8NCM2 988 aa10.68□□□□□ -0.7
LINC01139-201ENST00000400946 SSH3Q8TE77 659 aa10.68□□□□□ -0.7
LINC01139-201ENST00000400946 IP6K1Q92551 441 aa10.68□□□□□ -0.7
LINC01139-201ENST00000400946 LTN1O94822 1766 aa10.68□□□□□ -0.7
LINC01139-201ENST00000400946 PLEKHG2Q9H7P9 1386 aa10.68□□□□□ -0.7
LINC01139-201ENST00000400946 FOXO3O43524 673 aa10.68□□□□□ -0.7
LINC01139-201ENST00000400946 MX1P20591 662 aa10.68□□□□□ -0.7
LINC01139-201ENST00000400946 CLCN1P35523 988 aa10.68□□□□□ -0.7
LINC01139-201ENST00000400946 ZNF445P59923 1031 aa10.68□□□□□ -0.7
LINC01139-201ENST00000400946 FKBP5Q13451 457 aaPredicted RBP10.68□□□□□ -0.7
LINC01139-201ENST00000400946 NFAT5O94916 1531 aa10.67□□□□□ -0.7
LINC01139-201ENST00000400946 CUL4AQ13619 759 aa10.67□□□□□ -0.7
LINC01139-201ENST00000400946 SLC4A10Q6U841 1118 aa10.67□□□□□ -0.7
LINC01139-201ENST00000400946 IL17REQ8NFR9 667 aa10.67□□□□□ -0.7
LINC01139-201ENST00000400946 ESYT1Q9BSJ8 1104 aa10.67□□□□□ -0.7
LINC01139-201ENST00000400946 UBTFL1P0CB47 393 aaPredicted RBP10.66□□□□□ -0.7
LINC01139-201ENST00000400946 SSFA2P28290 1259 aa10.66□□□□□ -0.7
LINC01139-201ENST00000400946 AMOTQ4VCS5 1084 aa10.66□□□□□ -0.7
LINC01139-201ENST00000400946 ABTB2Q8N961 1025 aa10.66□□□□□ -0.7
LINC01139-201ENST00000400946 OTUD7AQ8TE49 926 aaPredicted RBP10.66□□□□□ -0.7
LINC01139-201ENST00000400946 PHF8Q9UPP1 1060 aa10.66□□□□□ -0.7
LINC01139-201ENST00000400946 USP42Q9H9J4 1324 aaKnown RBP10.65□□□□□ -0.7
LINC01139-201ENST00000400946 NUTM2FA1L443 756 aa10.65□□□□□ -0.7
LINC01139-201ENST00000400946 F6X3S4 739 aa10.65□□□□□ -0.7
LINC01139-201ENST00000400946 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
LINC01139-201ENST00000400946 SMARCA5O60264 1052 aaPredicted RBP10.65□□□□□ -0.7
LINC01139-201ENST00000400946 CCDC173Q0VFZ6 552 aa10.65□□□□□ -0.7
LINC01139-201ENST00000400946 PPP1R9BQ96SB3 815 aa10.65□□□□□ -0.7
LINC01139-201ENST00000400946 USP44Q9H0E7 712 aa10.65□□□□□ -0.7
LINC01139-201ENST00000400946 GZF1Q9H116 711 aaPredicted RBP10.65□□□□□ -0.7
LINC01139-201ENST00000400946 CAMTA1Q9Y6Y1 1673 aa10.65□□□□□ -0.71
LINC01139-201ENST00000400946 MST1RQ04912 1400 aa10.64□□□□□ -0.71
LINC01139-201ENST00000400946 CHMLP26374 656 aa10.64□□□□□ -0.71
LINC01139-201ENST00000400946 HSPA1LP34931 641 aa10.64□□□□□ -0.71
LINC01139-201ENST00000400946 MTX1Q13505 466 aa10.64□□□□□ -0.71
LINC01139-201ENST00000400946 HS1BP3Q53T59 392 aa10.64□□□□□ -0.71
LINC01139-201ENST00000400946 ANP32BQ92688 251 aaKnown RBP10.64□□□□□ -0.71
LINC01139-201ENST00000400946 KIF1BPQ96EK5 621 aa10.64□□□□□ -0.71
LINC01139-201ENST00000400946 MIS18AQ9NYP9 233 aa10.64□□□□□ -0.71
LINC01139-201ENST00000400946 DDX49Q9Y6V7 483 aaKnown RBP10.64□□□□□ -0.71
LINC01139-201ENST00000400946 CRYBG1Q9Y4K1 1723 aa10.64□□□□□ -0.71
LINC01139-201ENST00000400946 SLIT3O75094 1523 aa10.64□□□□□ -0.71
LINC01139-201ENST00000400946 MBD3O95983 291 aa10.63□□□□□ -0.71
LINC01139-201ENST00000400946 PDIA4P13667 645 aaKnown RBP10.63□□□□□ -0.71
LINC01139-201ENST00000400946 AKAP4Q5JQC9 854 aa10.63□□□□□ -0.71
LINC01139-201ENST00000400946 HDGFL1Q5TGJ6 251 aa10.63□□□□□ -0.71
LINC01139-201ENST00000400946 ADAMTS7Q9UKP4 1686 aa10.63□□□□□ -0.71
LINC01139-201ENST00000400946 TTC41PQ6P2S7 1318 aa10.63□□□□□ -0.71
LINC01139-201ENST00000400946 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
LINC01139-201ENST00000400946 ALDH1L1O75891 902 aa10.63□□□□□ -0.71
LINC01139-201ENST00000400946 EIF4A1P60842 406 aaKnown RBP10.63□□□□□ -0.71
LINC01139-201ENST00000400946 PLEKHO1Q53GL0 409 aaPredicted RBP10.63□□□□□ -0.71
LINC01139-201ENST00000400946 C19orf44Q9H6X5 657 aa10.63□□□□□ -0.71
LINC01139-201ENST00000400946 LMBRD1Q9NUN5 540 aa10.63□□□□□ -0.71
LINC01139-201ENST00000400946 LRRFIP2Q9Y608 721 aaKnown RBP10.63□□□□□ -0.71
LINC01139-201ENST00000400946 ABCC6O95255 1503 aa10.62□□□□□ -0.71
LINC01139-201ENST00000400946 AK9Q5TCS8 1911 aa10.62□□□□□ -0.71
LINC01139-201ENST00000400946 PNMA6EA0A0J9YXQ4 647 aa10.62□□□□□ -0.71
LINC01139-201ENST00000400946 TRIM44Q96DX7 344 aaPredicted RBP10.62□□□□□ -0.71
LINC01139-201ENST00000400946 SLAIN2Q9P270 581 aa10.62□□□□□ -0.71
LINC01139-201ENST00000400946 EXOC6BQ9Y2D4 811 aa10.62□□□□□ -0.71
LINC01139-201ENST00000400946 HEG1Q9ULI3 1381 aa10.61□□□□□ -0.71
LINC01139-201ENST00000400946 SOX12O15370 315 aa10.61□□□□□ -0.71
LINC01139-201ENST00000400946 HSPA4P34932 840 aa10.61□□□□□ -0.71
LINC01139-201ENST00000400946 NEK4P51957 841 aa10.61□□□□□ -0.71
LINC01139-201ENST00000400946 C14orf37Q86TY3 774 aa10.61□□□□□ -0.71
LINC01139-201ENST00000400946 ERC1Q8IUD2 1116 aa10.61□□□□□ -0.71
LINC01139-201ENST00000400946 DNAAF4Q8WXU2 420 aa10.61□□□□□ -0.71
LINC01139-201ENST00000400946 TMX3Q96JJ7 454 aa10.61□□□□□ -0.71
LINC01139-201ENST00000400946 RRAGDQ9NQL2 400 aaPredicted RBP10.61□□□□□ -0.71
LINC01139-201ENST00000400946 DBF4Q9UBU7 674 aaPredicted RBP10.61□□□□□ -0.71
LINC01139-201ENST00000400946 KIF1AQ12756 1690 aa10.6□□□□□ -0.71
LINC01139-201ENST00000400946 ESPNB1AK53 854 aa10.6□□□□□ -0.71
LINC01139-201ENST00000400946 BRD1O95696 1058 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms