RNA–Protein interactions for RNA: ENST00000400814.3

PRAMEF1-202, Transcript of PRAME family member 1, humanhuman

TSL 1 (best)

Gene PRAMEF1, Length 1,327 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-202ENST00000400814 KCNK17Q96T54 332 aa12.93□□□□□ -0.34
PRAMEF1-202ENST00000400814 DCCP43146 1447 aa12.93□□□□□ -0.34
PRAMEF1-202ENST00000400814 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
PRAMEF1-202ENST00000400814 LRRC7Q96NW7 1537 aa12.93□□□□□ -0.34
PRAMEF1-202ENST00000400814 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
PRAMEF1-202ENST00000400814 PDE4CQ08493 712 aa12.92□□□□□ -0.34
PRAMEF1-202ENST00000400814 SSH2Q76I76 1423 aa12.92□□□□□ -0.34
PRAMEF1-202ENST00000400814 ADAMTS19Q8TE59 1207 aa12.92□□□□□ -0.34
PRAMEF1-202ENST00000400814 TRIM34Q9BYJ4 488 aa12.92□□□□□ -0.34
PRAMEF1-202ENST00000400814 MRS2Q9HD23 443 aa12.92□□□□□ -0.34
PRAMEF1-202ENST00000400814 HMX1Q9NP08 348 aaPredicted RBP12.92□□□□□ -0.34
PRAMEF1-202ENST00000400814 XIRP1Q702N8 1843 aaKnown RBP12.91□□□□□ -0.34
PRAMEF1-202ENST00000400814 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
PRAMEF1-202ENST00000400814 MTMR2Q13614 643 aa12.91□□□□□ -0.34
PRAMEF1-202ENST00000400814 SWT1Q5T5J6 900 aaKnown RBP12.91□□□□□ -0.34
PRAMEF1-202ENST00000400814 MORC1Q86VD1 984 aa12.91□□□□□ -0.34
PRAMEF1-202ENST00000400814 PMFBP1Q8TBY8 1022 aa12.91□□□□□ -0.34
PRAMEF1-202ENST00000400814 HLA-CQ95604 372 aa12.91□□□□□ -0.34
PRAMEF1-202ENST00000400814 SCUBE2Q9NQ36 999 aa12.91□□□□□ -0.34
PRAMEF1-202ENST00000400814 USP6P35125 1406 aa12.91□□□□□ -0.34
PRAMEF1-202ENST00000400814 POTEHQ6S545 545 aa12.9□□□□□ -0.34
PRAMEF1-202ENST00000400814 PBXIP1Q96AQ6 731 aa12.9□□□□□ -0.34
PRAMEF1-202ENST00000400814 TTC21BQ7Z4L5 1316 aa12.9□□□□□ -0.34
PRAMEF1-202ENST00000400814 GPR37L1O60883 481 aa12.89□□□□□ -0.35
PRAMEF1-202ENST00000400814 ATF3P18847 181 aa12.89□□□□□ -0.35
PRAMEF1-202ENST00000400814 NGDNQ8NEJ9 315 aaKnown RBP12.89□□□□□ -0.35
PRAMEF1-202ENST00000400814 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
PRAMEF1-202ENST00000400814 ZBED2Q9BTP6 218 aa12.89□□□□□ -0.35
PRAMEF1-202ENST00000400814 GGNBP2Q9H3C7 697 aa12.89□□□□□ -0.35
PRAMEF1-202ENST00000400814 C1orf167Q5SNV9 1468 aa12.89□□□□□ -0.35
PRAMEF1-202ENST00000400814 ANKRD26Q9UPS8 1709 aa12.89□□□□□ -0.35
PRAMEF1-202ENST00000400814 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
PRAMEF1-202ENST00000400814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.35
PRAMEF1-202ENST00000400814 HELBQ8NG08 1087 aaPredicted RBP12.88□□□□□ -0.35
PRAMEF1-202ENST00000400814 MSH6P52701 1360 aa12.88□□□□□ -0.35
PRAMEF1-202ENST00000400814 NRKQ7Z2Y5 1582 aa12.88□□□□□ -0.35
PRAMEF1-202ENST00000400814 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
PRAMEF1-202ENST00000400814 MST1RQ04912 1400 aa12.88□□□□□ -0.35
PRAMEF1-202ENST00000400814 TTC21AQ8NDW8 1320 aa12.88□□□□□ -0.35
PRAMEF1-202ENST00000400814 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
PRAMEF1-202ENST00000400814 RFX1P22670 979 aa12.87□□□□□ -0.35
PRAMEF1-202ENST00000400814 MAMSTRQ6ZN01 415 aa12.87□□□□□ -0.35
PRAMEF1-202ENST00000400814 NME9Q86XW9 330 aa12.87□□□□□ -0.35
PRAMEF1-202ENST00000400814 LRRN4Q8WUT4 740 aa12.87□□□□□ -0.35
PRAMEF1-202ENST00000400814 VAC14Q08AM6 782 aa12.86□□□□□ -0.35
PRAMEF1-202ENST00000400814 TSC1Q92574 1164 aa12.86□□□□□ -0.35
PRAMEF1-202ENST00000400814 USP31Q70CQ4 1352 aa12.85□□□□□ -0.35
PRAMEF1-202ENST00000400814 CFAP99D6REC4 459 aa12.85□□□□□ -0.35
PRAMEF1-202ENST00000400814 SNPHO15079 494 aa12.85□□□□□ -0.35
PRAMEF1-202ENST00000400814 GZF1Q9H116 711 aaPredicted RBP12.85□□□□□ -0.35
PRAMEF1-202ENST00000400814 LTBP4Q8N2S1 1624 aa12.84□□□□□ -0.35
PRAMEF1-202ENST00000400814 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.84□□□□□ -0.35
PRAMEF1-202ENST00000400814 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
PRAMEF1-202ENST00000400814 FAM9BQ8IZU0 186 aa12.84□□□□□ -0.35
PRAMEF1-202ENST00000400814 COG3Q96JB2 828 aa12.84□□□□□ -0.35
PRAMEF1-202ENST00000400814 KIF1AQ12756 1690 aa12.83□□□□□ -0.36
PRAMEF1-202ENST00000400814 AATKQ6ZMQ8 1374 aa12.83□□□□□ -0.36
PRAMEF1-202ENST00000400814 C6orf229H3BNL8 230 aa12.83□□□□□ -0.36
PRAMEF1-202ENST00000400814 TNNT2P45379 298 aaPredicted RBP12.83□□□□□ -0.36
PRAMEF1-202ENST00000400814 MTHFSP49914 203 aa12.83□□□□□ -0.36
PRAMEF1-202ENST00000400814 PSME1Q06323 249 aa12.83□□□□□ -0.36
PRAMEF1-202ENST00000400814 YTHDC1Q96MU7 727 aaKnown RBP12.83□□□□□ -0.36
PRAMEF1-202ENST00000400814 PPP1R12CQ9BZL4 782 aa12.83□□□□□ -0.36
PRAMEF1-202ENST00000400814 ALG2Q9H553 416 aa12.83□□□□□ -0.36
PRAMEF1-202ENST00000400814 RABGEF1Q9UJ41 708 aa12.83□□□□□ -0.36
PRAMEF1-202ENST00000400814 OVOS2A0A0J9YW53 1432 aa12.82□□□□□ -0.36
PRAMEF1-202ENST00000400814 OVOS2Q6IE36 1432 aa12.82□□□□□ -0.36
PRAMEF1-202ENST00000400814 FOXO3O43524 673 aa12.82□□□□□ -0.36
PRAMEF1-202ENST00000400814 SLAIN2Q9P270 581 aa12.82□□□□□ -0.36
PRAMEF1-202ENST00000400814 SEPT9Q9UHD8 586 aaPredicted RBP12.82□□□□□ -0.36
PRAMEF1-202ENST00000400814 INSRP06213 1382 aa12.81□□□□□ -0.36
PRAMEF1-202ENST00000400814 PSEN2P49810 448 aa12.81□□□□□ -0.36
PRAMEF1-202ENST00000400814 FUT2Q10981 343 aa12.81□□□□□ -0.36
PRAMEF1-202ENST00000400814 TMCO4Q5TGY1 634 aa12.81□□□□□ -0.36
PRAMEF1-202ENST00000400814 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
PRAMEF1-202ENST00000400814 EPS8L1Q8TE68 723 aa12.81□□□□□ -0.36
PRAMEF1-202ENST00000400814 POLKQ9UBT6 870 aa12.81□□□□□ -0.36
PRAMEF1-202ENST00000400814 PNPLA6Q8IY17 1366 aa12.8□□□□□ -0.36
PRAMEF1-202ENST00000400814 SLC4A3P48751 1232 aa12.8□□□□□ -0.36
PRAMEF1-202ENST00000400814 USTQ9Y2C2 406 aa12.8□□□□□ -0.36
PRAMEF1-202ENST00000400814 USP54Q70EL1 1684 aa12.8□□□□□ -0.36
PRAMEF1-202ENST00000400814 PIK3C2AO00443 1686 aa12.79□□□□□ -0.36
PRAMEF1-202ENST00000400814 BRINP3Q76B58 766 aa12.79□□□□□ -0.36
PRAMEF1-202ENST00000400814 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
PRAMEF1-202ENST00000400814 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
PRAMEF1-202ENST00000400814 SLC4A5Q9BY07 1137 aa12.79□□□□□ -0.36
PRAMEF1-202ENST00000400814 MAP2P11137 1827 aaKnown RBP12.79□□□□□ -0.36
PRAMEF1-202ENST00000400814 PALM3A6NDB9 673 aaPredicted RBP12.78□□□□□ -0.36
PRAMEF1-202ENST00000400814 CSB-PGBD3P0DP91 1061 aa12.78□□□□□ -0.36
PRAMEF1-202ENST00000400814 FBLN1P23142 703 aa12.78□□□□□ -0.36
PRAMEF1-202ENST00000400814 SLF2Q8IX21 1173 aa12.78□□□□□ -0.36
PRAMEF1-202ENST00000400814 ADAMTS8Q9UP79 889 aa12.78□□□□□ -0.36
PRAMEF1-202ENST00000400814 SMG6Q86US8 1419 aaKnown RBP12.78□□□□□ -0.36
PRAMEF1-202ENST00000400814 TRPM3Q9HCF6 1732 aaPredicted RBP12.77□□□□□ -0.36
PRAMEF1-202ENST00000400814 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
PRAMEF1-202ENST00000400814 SYMPKQ92797 1274 aaKnown RBP12.77□□□□□ -0.37
PRAMEF1-202ENST00000400814 NPHP3Q7Z494 1330 aa12.77□□□□□ -0.37
PRAMEF1-202ENST00000400814 SBNO1A3KN83 1393 aa12.77□□□□□ -0.37
PRAMEF1-202ENST00000400814 PATL2C9JE40 543 aaKnown RBP12.76□□□□□ -0.37
PRAMEF1-202ENST00000400814 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms