RNA–Protein interactions for RNA: ENST00000400306.2

LINC02408-201, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 2 BASIC

Gene LINC02408, Length 1,766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-201ENST00000400306 RAPGEF4Q8WZA2 1011 aa10.31□□□□□ -0.76
LINC02408-201ENST00000400306 RUNDC1Q96C34 613 aa10.31□□□□□ -0.76
LINC02408-201ENST00000400306 STK24Q9Y6E0 443 aa10.31□□□□□ -0.76
LINC02408-201ENST00000400306 MAPK8IP3Q9UPT6 1336 aa10.31□□□□□ -0.76
LINC02408-201ENST00000400306 APAF1O14727 1248 aa10.31□□□□□ -0.76
LINC02408-201ENST00000400306 IL2RBP14784 551 aa10.31□□□□□ -0.76
LINC02408-201ENST00000400306 NEUROD2Q15784 382 aa10.31□□□□□ -0.76
LINC02408-201ENST00000400306 VIRMAQ69YN4 1812 aaKnown RBP10.31□□□□□ -0.76
LINC02408-201ENST00000400306 OVOS2A0A0G2JMS6 1433 aa10.3□□□□□ -0.76
LINC02408-201ENST00000400306 STK25O00506 426 aa10.3□□□□□ -0.76
LINC02408-201ENST00000400306 GPR162Q16538 588 aa10.3□□□□□ -0.76
LINC02408-201ENST00000400306 MTHFSDQ2M296 383 aaKnown RBP10.3□□□□□ -0.76
LINC02408-201ENST00000400306 BARGINQ6ZT62 677 aa10.3□□□□□ -0.76
LINC02408-201ENST00000400306 PLSCR1O15162 318 aa10.29□□□□□ -0.76
LINC02408-201ENST00000400306 MAP3K5Q99683 1374 aa10.29□□□□□ -0.76
LINC02408-201ENST00000400306 HNRNPUQ00839 825 aaKnown RBP eCLIP10.29□□□□□ -0.76
LINC02408-201ENST00000400306 ZNF530Q6P9A1 599 aaPredicted RBP10.29□□□□□ -0.76
LINC02408-201ENST00000400306 FAM163AQ96GL9 167 aaPredicted RBP10.29□□□□□ -0.76
LINC02408-201ENST00000400306 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
LINC02408-201ENST00000400306 COL24A1Q17RW2 1714 aa10.28□□□□□ -0.76
LINC02408-201ENST00000400306 NEFMP07197 916 aa10.28□□□□□ -0.76
LINC02408-201ENST00000400306 HSPA6P17066 643 aa10.28□□□□□ -0.76
LINC02408-201ENST00000400306 TMPOP42166 694 aaKnown RBP10.28□□□□□ -0.76
LINC02408-201ENST00000400306 PNNQ9H307 717 aaKnown RBP10.28□□□□□ -0.76
LINC02408-201ENST00000400306 THRAP3Q9Y2W1 955 aaKnown RBP10.28□□□□□ -0.76
LINC02408-201ENST00000400306 NFE2L2Q16236 605 aa10.27□□□□□ -0.77
LINC02408-201ENST00000400306 PLEKHO1Q53GL0 409 aaPredicted RBP10.27□□□□□ -0.77
LINC02408-201ENST00000400306 ZCRB1Q8TBF4 217 aaKnown RBP10.27□□□□□ -0.77
LINC02408-201ENST00000400306 DDX54Q8TDD1 881 aaKnown RBP10.27□□□□□ -0.77
LINC02408-201ENST00000400306 MTFR1LQ9H019 292 aa10.27□□□□□ -0.77
LINC02408-201ENST00000400306 TNS2Q63HR2 1409 aa10.27□□□□□ -0.77
LINC02408-201ENST00000400306 QSER1Q2KHR3 1735 aa10.27□□□□□ -0.77
LINC02408-201ENST00000400306 RIPK4P57078 832 aa10.26□□□□□ -0.77
LINC02408-201ENST00000400306 DCTN1Q14203 1278 aa10.26□□□□□ -0.77
LINC02408-201ENST00000400306 STK32BQ9NY57 414 aa10.26□□□□□ -0.77
LINC02408-201ENST00000400306 SPG7Q9UQ90 795 aa10.26□□□□□ -0.77
LINC02408-201ENST00000400306 CYP27B1O15528 508 aa10.26□□□□□ -0.77
LINC02408-201ENST00000400306 ARXQ96QS3 562 aa10.26□□□□□ -0.77
LINC02408-201ENST00000400306 THUMPD2Q9BTF0 503 aaKnown RBP10.26□□□□□ -0.77
LINC02408-201ENST00000400306 TOGARAM1Q9Y4F4 1720 aa10.26□□□□□ -0.77
LINC02408-201ENST00000400306 SCN11AQ9UI33 1791 aa10.25□□□□□ -0.77
LINC02408-201ENST00000400306 EXOC5O00471 708 aa10.25□□□□□ -0.77
LINC02408-201ENST00000400306 DDB1Q16531 1140 aa10.25□□□□□ -0.77
LINC02408-201ENST00000400306 AMOTQ4VCS5 1084 aa10.25□□□□□ -0.77
LINC02408-201ENST00000400306 GAS2L2Q8NHY3 880 aa10.25□□□□□ -0.77
LINC02408-201ENST00000400306 DOT1LQ8TEK3 1739 aa10.25□□□□□ -0.77
LINC02408-201ENST00000400306 KAT6BQ8WYB5 2073 aa10.24□□□□□ -0.77
LINC02408-201ENST00000400306 PCDH11XQ9BZA7 1347 aa10.24□□□□□ -0.77
LINC02408-201ENST00000400306 PCDH11YQ9BZA8 1340 aa10.24□□□□□ -0.77
LINC02408-201ENST00000400306 PHKG2P15735 406 aa10.24□□□□□ -0.77
LINC02408-201ENST00000400306 SLC15A2Q16348 729 aa10.24□□□□□ -0.77
LINC02408-201ENST00000400306 C1orf141Q5JVX7 400 aa10.24□□□□□ -0.77
LINC02408-201ENST00000400306 MPRIPQ6WCQ1 1025 aa10.24□□□□□ -0.77
LINC02408-201ENST00000400306 MCM10Q7L590 875 aa10.24□□□□□ -0.77
LINC02408-201ENST00000400306 KDM6AO15550 1401 aaPredicted RBP10.24□□□□□ -0.77
LINC02408-201ENST00000400306 MARCH10Q8NA82 808 aaPredicted RBP10.24□□□□□ -0.77
LINC02408-201ENST00000400306 CDCA7Q9BWT1 371 aaPredicted RBP10.24□□□□□ -0.77
LINC02408-201ENST00000400306 LGR6Q9HBX8 967 aa10.24□□□□□ -0.77
LINC02408-201ENST00000400306 TUBGCP6Q96RT7 1819 aa10.23□□□□□ -0.77
LINC02408-201ENST00000400306 ADAMTS7Q9UKP4 1686 aa10.23□□□□□ -0.77
LINC02408-201ENST00000400306 PAPPAQ13219 1627 aa10.23□□□□□ -0.77
LINC02408-201ENST00000400306 GNAT3A8MTJ3 354 aa10.23□□□□□ -0.77
LINC02408-201ENST00000400306 AKAP4Q5JQC9 854 aa10.23□□□□□ -0.77
LINC02408-201ENST00000400306 IFNL2Q8IZJ0 200 aa10.23□□□□□ -0.77
LINC02408-201ENST00000400306 ATP10DQ9P241 1426 aa10.23□□□□□ -0.77
LINC02408-201ENST00000400306 ITGB4P16144 1822 aa10.22□□□□□ -0.77
LINC02408-201ENST00000400306 SNPHO15079 494 aa10.22□□□□□ -0.77
LINC02408-201ENST00000400306 SIPA1L3O60292 1781 aaPredicted RBP10.22□□□□□ -0.77
LINC02408-201ENST00000400306 POTEMA6NI47 508 aa10.21□□□□□ -0.77
LINC02408-201ENST00000400306 RNMTO43148 476 aaKnown RBP10.21□□□□□ -0.77
LINC02408-201ENST00000400306 WWC1Q8IX03 1113 aa10.21□□□□□ -0.77
LINC02408-201ENST00000400306 IL17REQ8NFR9 667 aa10.21□□□□□ -0.77
LINC02408-201ENST00000400306 PLEKHG2Q9H7P9 1386 aa10.21□□□□□ -0.77
LINC02408-201ENST00000400306 POTEGQ6S5H5 508 aa10.21□□□□□ -0.78
LINC02408-201ENST00000400306 RTF1Q92541 710 aaKnown RBP10.21□□□□□ -0.78
LINC02408-201ENST00000400306 ACSBG1Q96GR2 724 aa10.21□□□□□ -0.78
LINC02408-201ENST00000400306 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.78
LINC02408-201ENST00000400306 WDR90Q96KV7 1748 aa10.2□□□□□ -0.78
LINC02408-201ENST00000400306 NHSQ6T4R5 1651 aa10.2□□□□□ -0.78
LINC02408-201ENST00000400306 PTF1AQ7RTS3 328 aa10.2□□□□□ -0.78
LINC02408-201ENST00000400306 LAS1LQ9Y4W2 734 aaKnown RBP10.2□□□□□ -0.78
LINC02408-201ENST00000400306 ZNF521Q96K83 1311 aa10.2□□□□□ -0.78
LINC02408-201ENST00000400306 LMOD3Q0VAK6 560 aa10.19□□□□□ -0.78
LINC02408-201ENST00000400306 TXNRD1Q16881 649 aa10.19□□□□□ -0.78
LINC02408-201ENST00000400306 LCE2DQ5TA82 110 aaPredicted RBP10.19□□□□□ -0.78
LINC02408-201ENST00000400306 CDCA7LQ96GN5 454 aa10.19□□□□□ -0.78
LINC02408-201ENST00000400306 TMEM121BQ9BXQ6 578 aaPredicted RBP10.19□□□□□ -0.78
LINC02408-201ENST00000400306 GPBP1L1Q9HC44 474 aaPredicted RBP10.19□□□□□ -0.78
LINC02408-201ENST00000400306 BTAF1O14981 1849 aa10.19□□□□□ -0.78
LINC02408-201ENST00000400306 ZBED9Q6R2W3 1325 aa10.19□□□□□ -0.78
LINC02408-201ENST00000400306 NKX1-1Q15270 411 aaPredicted RBP10.19□□□□□ -0.78
LINC02408-201ENST00000400306 CCDC27Q2M243 656 aa10.19□□□□□ -0.78
LINC02408-201ENST00000400306 DCAF5Q96JK2 942 aa10.19□□□□□ -0.78
LINC02408-201ENST00000400306 MIS18AQ9NYP9 233 aa10.19□□□□□ -0.78
LINC02408-201ENST00000400306 HTATSF1O43719 755 aaKnown RBP10.18□□□□□ -0.78
LINC02408-201ENST00000400306 HSP90AB1P08238 724 aaKnown RBP10.18□□□□□ -0.78
LINC02408-201ENST00000400306 FBXO22Q8NEZ5 403 aa10.18□□□□□ -0.78
LINC02408-201ENST00000400306 CEMIPQ8WUJ3 1361 aa10.18□□□□□ -0.78
LINC02408-201ENST00000400306 MRC1P22897 1456 aa10.18□□□□□ -0.78
LINC02408-201ENST00000400306 KDM3BQ7LBC6 1761 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms