RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 FAM98CQ17RN3 349 aaKnown RBP21.54■■□□□ 1.04
CSNK2A1-203ENST00000400217 USP16Q9Y5T5 823 aa21.54■■□□□ 1.04
CSNK2A1-203ENST00000400217 UBR2Q8IWV8 1755 aa21.53■■□□□ 1.04
CSNK2A1-203ENST00000400217 PDIA6Q15084 440 aa21.53■■□□□ 1.04
CSNK2A1-203ENST00000400217 PROSER3Q2NL68 480 aa21.53■■□□□ 1.04
CSNK2A1-203ENST00000400217 HDAC1Q13547 482 aaPredicted RBP21.52■■□□□ 1.04
CSNK2A1-203ENST00000400217 MARCH10Q8NA82 808 aaPredicted RBP21.52■■□□□ 1.04
CSNK2A1-203ENST00000400217 ITGB4P16144 1822 aa21.52■■□□□ 1.04
CSNK2A1-203ENST00000400217 KCPQ6ZWJ8 1503 aa21.52■■□□□ 1.04
CSNK2A1-203ENST00000400217 BCL9O00512 1426 aa21.52■■□□□ 1.03
CSNK2A1-203ENST00000400217 PTCD1O75127 700 aaKnown RBP21.52■■□□□ 1.03
CSNK2A1-203ENST00000400217 GLI3P10071 1580 aa21.51■■□□□ 1.03
CSNK2A1-203ENST00000400217 AFF2P51816 1311 aa21.51■■□□□ 1.03
CSNK2A1-203ENST00000400217 ASAP1Q9ULH1 1129 aa21.51■■□□□ 1.03
CSNK2A1-203ENST00000400217 PXDNLA1KZ92 1463 aa21.5■■□□□ 1.03
CSNK2A1-203ENST00000400217 PI4KAP2A4QPH2 592 aa21.5■■□□□ 1.03
CSNK2A1-203ENST00000400217 PRIM1P49642 420 aaKnown RBP21.5■■□□□ 1.03
CSNK2A1-203ENST00000400217 PI4KAP1Q8N8J0 262 aa21.5■■□□□ 1.03
CSNK2A1-203ENST00000400217 ATG3Q9NT62 314 aa21.5■■□□□ 1.03
CSNK2A1-203ENST00000400217 DNAAF4Q8WXU2 420 aa21.49■■□□□ 1.03
CSNK2A1-203ENST00000400217 DDX58O95786 925 aaKnown RBP21.48■■□□□ 1.03
CSNK2A1-203ENST00000400217 KSR2Q6VAB6 950 aa21.48■■□□□ 1.03
CSNK2A1-203ENST00000400217 SYTL4Q96C24 671 aaPredicted RBP21.48■■□□□ 1.03
CSNK2A1-203ENST00000400217 MEIS3Q99687 375 aa21.48■■□□□ 1.03
CSNK2A1-203ENST00000400217 C1orf115Q9H7X2 142 aa21.48■■□□□ 1.03
CSNK2A1-203ENST00000400217 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
CSNK2A1-203ENST00000400217 ERBB4Q15303 1308 aa21.48■■□□□ 1.03
CSNK2A1-203ENST00000400217 MYL6BP14649 208 aa21.47■■□□□ 1.03
CSNK2A1-203ENST00000400217 VSIG10Q8N0Z9 540 aa21.47■■□□□ 1.03
CSNK2A1-203ENST00000400217 KAT6BQ8WYB5 2073 aa21.47■■□□□ 1.03
CSNK2A1-203ENST00000400217 ADCY9O60503 1353 aa21.47■■□□□ 1.03
CSNK2A1-203ENST00000400217 GJD4Q96KN9 370 aaPredicted RBP21.46■■□□□ 1.03
CSNK2A1-203ENST00000400217 TEX13AQ9BXU3 409 aaPredicted RBP21.46■■□□□ 1.03
CSNK2A1-203ENST00000400217 SRCIN1Q9C0H9 1055 aa21.46■■□□□ 1.03
CSNK2A1-203ENST00000400217 DOT1LQ8TEK3 1739 aa21.45■■□□□ 1.03
CSNK2A1-203ENST00000400217 N4BP2Q86UW6 1770 aaPredicted RBP21.45■■□□□ 1.02
CSNK2A1-203ENST00000400217 AIMP1Q12904 312 aaKnown RBP21.45■■□□□ 1.02
CSNK2A1-203ENST00000400217 BEND3Q5T5X7 828 aa21.45■■□□□ 1.02
CSNK2A1-203ENST00000400217 LRP10Q7Z4F1 713 aa21.45■■□□□ 1.02
CSNK2A1-203ENST00000400217 XAGE3Q8WTP9 111 aa21.45■■□□□ 1.02
CSNK2A1-203ENST00000400217 TRPC5Q9UL62 973 aaPredicted RBP21.45■■□□□ 1.02
CSNK2A1-203ENST00000400217 MAP3K2Q9Y2U5 619 aa21.45■■□□□ 1.02
CSNK2A1-203ENST00000400217 ATRNO75882 1429 aa21.44■■□□□ 1.02
CSNK2A1-203ENST00000400217 A0A0G2JS52 829 aa21.44■■□□□ 1.02
CSNK2A1-203ENST00000400217 GNAI3P08754 354 aa21.44■■□□□ 1.02
CSNK2A1-203ENST00000400217 MYT1Q01538 1121 aa21.44■■□□□ 1.02
CSNK2A1-203ENST00000400217 COPS6Q7L5N1 327 aa21.44■■□□□ 1.02
CSNK2A1-203ENST00000400217 ACSBG1Q96GR2 724 aa21.44■■□□□ 1.02
CSNK2A1-203ENST00000400217 RBM42Q9BTD8 480 aaKnown RBP21.44■■□□□ 1.02
CSNK2A1-203ENST00000400217 ATP10DQ9P241 1426 aa21.43■■□□□ 1.02
CSNK2A1-203ENST00000400217 RPAP2Q8IXW5 612 aaPredicted RBP21.43■■□□□ 1.02
CSNK2A1-203ENST00000400217 PIP4K2AP48426 406 aaPredicted RBP21.42■■□□□ 1.02
CSNK2A1-203ENST00000400217 SIRT2Q8IXJ6 389 aa21.42■■□□□ 1.02
CSNK2A1-203ENST00000400217 SMC5Q8IY18 1101 aa21.42■■□□□ 1.02
CSNK2A1-203ENST00000400217 NBPF26B4DH59 902 aa21.41■■□□□ 1.02
CSNK2A1-203ENST00000400217 A1BGP04217 495 aa21.41■■□□□ 1.02
CSNK2A1-203ENST00000400217 GNAI2P04899 355 aa21.41■■□□□ 1.02
CSNK2A1-203ENST00000400217 NBPF14Q5TI25 921 aa21.41■■□□□ 1.02
CSNK2A1-203ENST00000400217 NBPF10Q6P3W6 841 aaKnown RBP21.41■■□□□ 1.02
CSNK2A1-203ENST00000400217 RIC3Q7Z5B4 369 aa21.41■■□□□ 1.02
CSNK2A1-203ENST00000400217 SKAP1Q86WV1 359 aa21.41■■□□□ 1.02
CSNK2A1-203ENST00000400217 NBPF15Q8N660 670 aa21.41■■□□□ 1.02
CSNK2A1-203ENST00000400217 ANKRD44Q8N8A2 993 aa21.41■■□□□ 1.02
CSNK2A1-203ENST00000400217 USP44Q9H0E7 712 aa21.41■■□□□ 1.02
CSNK2A1-203ENST00000400217 THSD7AQ9UPZ6 1657 aa21.41■■□□□ 1.02
CSNK2A1-203ENST00000400217 ONECUT3O60422 494 aaPredicted RBP21.4■■□□□ 1.02
CSNK2A1-203ENST00000400217 ALDH1L1O75891 902 aa21.4■■□□□ 1.02
CSNK2A1-203ENST00000400217 ANKRD13DQ6ZTN6 518 aa21.4■■□□□ 1.02
CSNK2A1-203ENST00000400217 DNAJC10Q8IXB1 793 aa21.4■■□□□ 1.02
CSNK2A1-203ENST00000400217 STARD3NLO95772 234 aa21.39■■□□□ 1.02
CSNK2A1-203ENST00000400217 CEP85Q6P2H3 762 aa21.39■■□□□ 1.02
CSNK2A1-203ENST00000400217 QTRT2Q9H974 415 aaKnown RBP21.39■■□□□ 1.02
CSNK2A1-203ENST00000400217 PDZRN3Q9UPQ7 1066 aa21.39■■□□□ 1.02
CSNK2A1-203ENST00000400217 UBTFL1P0CB47 393 aaPredicted RBP21.38■■□□□ 1.01
CSNK2A1-203ENST00000400217 LINS1Q8NG48 757 aa21.38■■□□□ 1.01
CSNK2A1-203ENST00000400217 GCC1Q96CN9 775 aa21.38■■□□□ 1.01
CSNK2A1-203ENST00000400217 SLC4A9Q96Q91 983 aa21.38■■□□□ 1.01
CSNK2A1-203ENST00000400217 TSHZ2Q9NRE2 1034 aa21.38■■□□□ 1.01
CSNK2A1-203ENST00000400217 METTL22Q9BUU2 404 aaPredicted RBP21.37■■□□□ 1.01
CSNK2A1-203ENST00000400217 KCNQ2O43526 872 aa21.36■■□□□ 1.01
CSNK2A1-203ENST00000400217 NEXNQ0ZGT2 675 aa21.36■■□□□ 1.01
CSNK2A1-203ENST00000400217 PLBD2Q8NHP8 589 aa21.36■■□□□ 1.01
CSNK2A1-203ENST00000400217 SMARCC1Q92922 1105 aaPredicted RBP21.36■■□□□ 1.01
CSNK2A1-203ENST00000400217 RGS3P49796 1198 aa21.35■■□□□ 1.01
CSNK2A1-203ENST00000400217 HMMRO75330 724 aa21.34■■□□□ 1.01
CSNK2A1-203ENST00000400217 CYP19A1P11511 503 aaPredicted RBP21.34■■□□□ 1.01
CSNK2A1-203ENST00000400217 CWF19L2Q2TBE0 894 aaKnown RBP21.33■■□□□ 1.01
CSNK2A1-203ENST00000400217 SEPT12Q8IYM1 358 aa21.33■■□□□ 1.01
CSNK2A1-203ENST00000400217 MYD88Q99836 296 aa21.33■■□□□ 1.01
CSNK2A1-203ENST00000400217 DCTPP1Q9H773 170 aa21.33■■□□□ 1.01
CSNK2A1-203ENST00000400217 LRRFIP2Q9Y608 721 aaKnown RBP21.33■■□□□ 1.01
CSNK2A1-203ENST00000400217 IBTKQ9P2D0 1353 aaPredicted RBP21.33■■□□□ 1
CSNK2A1-203ENST00000400217 IGKV5-2P06315 115 aa21.32■■□□□ 1
CSNK2A1-203ENST00000400217 NBPF7P0C2Y1 421 aaPredicted RBP21.32■■□□□ 1
CSNK2A1-203ENST00000400217 ATP8B2P98198 1209 aa21.32■■□□□ 1
CSNK2A1-203ENST00000400217 NUCB1Q02818 461 aa21.32■■□□□ 1
CSNK2A1-203ENST00000400217 TTLL7Q6ZT98 887 aa21.32■■□□□ 1
CSNK2A1-203ENST00000400217 C9orf78Q9NZ63 289 aaPredicted RBP21.32■■□□□ 1
CSNK2A1-203ENST00000400217 HDAC5Q9UQL6 1122 aa21.32■■□□□ 1
CSNK2A1-203ENST00000400217 PALLDQ8WX93 1383 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms