RNA–Protein interactions for RNA: ENST00000400163.6

COL4A2-202, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 5

Gene COL4A2, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-202ENST00000400163 JMYQ8N9B5 988 aa25.07■■□□□ 1.6
COL4A2-202ENST00000400163 PCGF6Q9BYE7 350 aa25.07■■□□□ 1.6
COL4A2-202ENST00000400163 LGR6Q9HBX8 967 aa25.07■■□□□ 1.6
COL4A2-202ENST00000400163 CYP19A1P11511 503 aaPredicted RBP25.06■■□□□ 1.6
COL4A2-202ENST00000400163 NFIXQ14938 502 aa25.06■■□□□ 1.6
COL4A2-202ENST00000400163 SLC39A6Q13433 755 aa25.05■■□□□ 1.6
COL4A2-202ENST00000400163 NARFQ9UHQ1 456 aa25.05■■□□□ 1.6
COL4A2-202ENST00000400163 RASSF7Q02833 373 aa25.04■■□□□ 1.6
COL4A2-202ENST00000400163 VIRMAQ69YN4 1812 aaKnown RBP25.04■■□□□ 1.6
COL4A2-202ENST00000400163 RNMTO43148 476 aaKnown RBP25.03■■□□□ 1.6
COL4A2-202ENST00000400163 SMC1BQ8NDV3 1235 aa25.03■■□□□ 1.6
COL4A2-202ENST00000400163 KNSTRNQ9Y448 316 aa25.03■■□□□ 1.6
COL4A2-202ENST00000400163 NRXN2Q9P2S2 1712 aa25.02■■□□□ 1.6
COL4A2-202ENST00000400163 ZC3H4Q9UPT8 1303 aaKnown RBP25.02■■□□□ 1.6
COL4A2-202ENST00000400163 COL15A1P39059 1388 aa25.02■■□□□ 1.6
COL4A2-202ENST00000400163 SERPINB2P05120 415 aa25.01■■□□□ 1.59
COL4A2-202ENST00000400163 LMNB1P20700 586 aa25.01■■□□□ 1.59
COL4A2-202ENST00000400163 COL13A1Q5TAT6 717 aaPredicted RBP25.01■■□□□ 1.59
COL4A2-202ENST00000400163 BCL2L12Q9HB09 334 aa25.01■■□□□ 1.59
COL4A2-202ENST00000400163 ZBTB1Q9Y2K1 713 aa25.01■■□□□ 1.59
COL4A2-202ENST00000400163 MRC1P22897 1456 aa25.01■■□□□ 1.59
COL4A2-202ENST00000400163 DLEC1Q9Y238 1755 aa25■■□□□ 1.59
COL4A2-202ENST00000400163 CCDC88AQ3V6T2 1871 aa25■■□□□ 1.59
COL4A2-202ENST00000400163 PRELPP51888 382 aa25■■□□□ 1.59
COL4A2-202ENST00000400163 HMOX1P09601 288 aa24.99■■□□□ 1.59
COL4A2-202ENST00000400163 TTLL6Q8N841 843 aa24.99■■□□□ 1.59
COL4A2-202ENST00000400163 GLTPD2A6NH11 291 aa24.98■■□□□ 1.59
COL4A2-202ENST00000400163 VEGFAP15692 232 aaPredicted RBP24.97■■□□□ 1.59
COL4A2-202ENST00000400163 C2CD5Q86YS7 1000 aa24.97■■□□□ 1.59
COL4A2-202ENST00000400163 AMER1Q5JTC6 1135 aaPredicted RBP24.96■■□□□ 1.59
COL4A2-202ENST00000400163 VSIG10Q8N0Z9 540 aa24.96■■□□□ 1.59
COL4A2-202ENST00000400163 CANXP27824 592 aaKnown RBP24.95■■□□□ 1.58
COL4A2-202ENST00000400163 MTHFSDQ2M296 383 aaKnown RBP24.95■■□□□ 1.58
COL4A2-202ENST00000400163 CARMIL3Q8ND23 1372 aa24.94■■□□□ 1.58
COL4A2-202ENST00000400163 H0YIN7 160 aa24.94■■□□□ 1.58
COL4A2-202ENST00000400163 BICDL1Q6ZP65 573 aa24.93■■□□□ 1.58
COL4A2-202ENST00000400163 UBR2Q8IWV8 1755 aa24.93■■□□□ 1.58
COL4A2-202ENST00000400163 TIAM2Q8IVF5 1701 aa24.92■■□□□ 1.58
COL4A2-202ENST00000400163 NFKBIEO00221 500 aa24.92■■□□□ 1.58
COL4A2-202ENST00000400163 EIF5P55010 431 aaKnown RBP24.91■■□□□ 1.58
COL4A2-202ENST00000400163 STARD3NLO95772 234 aa24.9■■□□□ 1.58
COL4A2-202ENST00000400163 A0A087WZG4 1122 aa24.89■■□□□ 1.58
COL4A2-202ENST00000400163 TNS4Q8IZW8 715 aa24.89■■□□□ 1.58
COL4A2-202ENST00000400163 ANKRD31Q8N7Z5 1873 aa24.89■■□□□ 1.57
COL4A2-202ENST00000400163 POTECB2RU33 542 aa24.88■■□□□ 1.57
COL4A2-202ENST00000400163 DIAPH1O60610 1272 aaKnown RBP24.88■■□□□ 1.57
COL4A2-202ENST00000400163 TBC1D9BQ66K14 1250 aa24.88■■□□□ 1.57
COL4A2-202ENST00000400163 TTC5Q8N0Z6 440 aa24.88■■□□□ 1.57
COL4A2-202ENST00000400163 CAPN15O75808 1086 aa24.87■■□□□ 1.57
COL4A2-202ENST00000400163 ZNF622Q969S3 477 aaKnown RBP eCLIP24.87■■□□□ 1.57
COL4A2-202ENST00000400163 DPY19L2Q6NUT2 758 aa24.86■■□□□ 1.57
COL4A2-202ENST00000400163 ZNF496Q96IT1 587 aaPredicted RBP24.86■■□□□ 1.57
COL4A2-202ENST00000400163 BRIP1Q9BX63 1249 aa24.86■■□□□ 1.57
COL4A2-202ENST00000400163 DICER1Q9UPY3 1922 aaKnown RBP24.86■■□□□ 1.57
COL4A2-202ENST00000400163 C21orf2O43822 256 aa24.85■■□□□ 1.57
COL4A2-202ENST00000400163 PDE6BP35913 854 aa24.85■■□□□ 1.57
COL4A2-202ENST00000400163 CCER1Q8TC90 406 aaPredicted RBP24.85■■□□□ 1.57
COL4A2-202ENST00000400163 PDZRN3Q9UPQ7 1066 aa24.85■■□□□ 1.57
COL4A2-202ENST00000400163 FER1L6Q2WGJ9 1857 aa24.85■■□□□ 1.57
COL4A2-202ENST00000400163 HSPA1AP0DMV8 641 aaKnown RBP24.84■■□□□ 1.57
COL4A2-202ENST00000400163 HSPA1BP0DMV9 641 aaKnown RBP24.84■■□□□ 1.57
COL4A2-202ENST00000400163 PRR5LQ6MZQ0 368 aa24.84■■□□□ 1.57
COL4A2-202ENST00000400163 CCDC24Q8N4L8 307 aa24.84■■□□□ 1.57
COL4A2-202ENST00000400163 ZNF219Q9P2Y4 722 aaPredicted RBP24.84■■□□□ 1.57
COL4A2-202ENST00000400163 TBC1D2BQ9UPU7 963 aa24.84■■□□□ 1.57
COL4A2-202ENST00000400163 ERFEQ4G0M1 354 aa24.83■■□□□ 1.57
COL4A2-202ENST00000400163 TEX13AQ9BXU3 409 aaPredicted RBP24.83■■□□□ 1.57
COL4A2-202ENST00000400163 HEG1Q9ULI3 1381 aa24.82■■□□□ 1.56
COL4A2-202ENST00000400163 COL11A2P13942 1736 aaPredicted RBP24.82■■□□□ 1.56
COL4A2-202ENST00000400163 ZNF790Q6PG37 636 aa24.82■■□□□ 1.56
COL4A2-202ENST00000400163 IL17REQ8NFR9 667 aa24.82■■□□□ 1.56
COL4A2-202ENST00000400163 ZNF330Q9Y3S2 320 aaPredicted RBP24.82■■□□□ 1.56
COL4A2-202ENST00000400163 SCN7AQ01118 1682 aa24.81■■□□□ 1.56
COL4A2-202ENST00000400163 PER1O15534 1290 aaPredicted RBP24.81■■□□□ 1.56
COL4A2-202ENST00000400163 TEFQ10587 303 aa24.81■■□□□ 1.56
COL4A2-202ENST00000400163 KIF7Q2M1P5 1343 aa24.81■■□□□ 1.56
COL4A2-202ENST00000400163 IL6STP40189 918 aaPredicted RBP24.8■■□□□ 1.56
COL4A2-202ENST00000400163 CC2D1BQ5T0F9 858 aaKnown RBP24.8■■□□□ 1.56
COL4A2-202ENST00000400163 GNAT3A8MTJ3 354 aa24.79■■□□□ 1.56
COL4A2-202ENST00000400163 SIPA1L3O60292 1781 aaPredicted RBP24.79■■□□□ 1.56
COL4A2-202ENST00000400163 SLX4Q8IY92 1834 aa24.78■■□□□ 1.56
COL4A2-202ENST00000400163 TAOK3Q9H2K8 898 aa24.78■■□□□ 1.56
COL4A2-202ENST00000400163 LTBP3Q9NS15 1303 aa24.78■■□□□ 1.56
COL4A2-202ENST00000400163 PCNTO95613 3336 aa24.77■■□□□ 1.56
COL4A2-202ENST00000400163 A1BGP04217 495 aa24.77■■□□□ 1.56
COL4A2-202ENST00000400163 GAS2L2Q8NHY3 880 aa24.77■■□□□ 1.56
COL4A2-202ENST00000400163 CNKSR1Q969H4 720 aa24.77■■□□□ 1.56
COL4A2-202ENST00000400163 SETDB2Q96T68 719 aa24.77■■□□□ 1.56
COL4A2-202ENST00000400163 CACNA1SQ13698 1873 aa24.77■■□□□ 1.56
COL4A2-202ENST00000400163 U2SURPO15042 1029 aaKnown RBP24.76■■□□□ 1.55
COL4A2-202ENST00000400163 CAMTA2O94983 1202 aa24.76■■□□□ 1.55
COL4A2-202ENST00000400163 CHADLQ6NUI6 762 aa24.76■■□□□ 1.55
COL4A2-202ENST00000400163 CNBD1Q8NA66 436 aa24.76■■□□□ 1.55
COL4A2-202ENST00000400163 FMNL2Q96PY5 1086 aa24.76■■□□□ 1.55
COL4A2-202ENST00000400163 NPHP1O15259 732 aa24.75■■□□□ 1.55
COL4A2-202ENST00000400163 DDNO94850 711 aaPredicted RBP24.75■■□□□ 1.55
COL4A2-202ENST00000400163 STYK1Q6J9G0 422 aa24.75■■□□□ 1.55
COL4A2-202ENST00000400163 NPM2Q86SE8 214 aaKnown RBP24.75■■□□□ 1.55
COL4A2-202ENST00000400163 COL3A1P02461 1466 aaPredicted RBP24.75■■□□□ 1.55
COL4A2-202ENST00000400163 SRGNP10124 158 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms