RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 C22orf23Q9BZE7 217 aa17.13■□□□□ 0.33
GABPA-202ENST00000400075 BOLA2Q9H3K6 86 aa17.13■□□□□ 0.33
GABPA-202ENST00000400075 PRAG1Q86YV5 1406 aa17.13■□□□□ 0.33
GABPA-202ENST00000400075 MTHFSDQ2M296 383 aaKnown RBP17.13■□□□□ 0.33
GABPA-202ENST00000400075 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
GABPA-202ENST00000400075 TCOF1Q13428 1488 aaKnown RBP17.12■□□□□ 0.33
GABPA-202ENST00000400075 PIP4K2AP48426 406 aaPredicted RBP17.12■□□□□ 0.33
GABPA-202ENST00000400075 NEK4P51957 841 aa17.12■□□□□ 0.33
GABPA-202ENST00000400075 CABP5Q9NP86 173 aa17.12■□□□□ 0.33
GABPA-202ENST00000400075 MBIPQ9NS73 344 aa17.12■□□□□ 0.33
GABPA-202ENST00000400075 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.12■□□□□ 0.33
GABPA-202ENST00000400075 CCDC73Q6ZRK6 1079 aa17.12■□□□□ 0.33
GABPA-202ENST00000400075 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
GABPA-202ENST00000400075 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
GABPA-202ENST00000400075 PTPRCP08575 1304 aa17.12■□□□□ 0.33
GABPA-202ENST00000400075 CNBD1Q8NA66 436 aa17.12■□□□□ 0.33
GABPA-202ENST00000400075 GPR162Q16538 588 aa17.11■□□□□ 0.33
GABPA-202ENST00000400075 IMMTQ16891 758 aaKnown RBP17.11■□□□□ 0.33
GABPA-202ENST00000400075 EYA3Q99504 573 aa17.11■□□□□ 0.33
GABPA-202ENST00000400075 CCDC8Q9H0W5 538 aaPredicted RBP17.11■□□□□ 0.33
GABPA-202ENST00000400075 NOC3LQ8WTT2 800 aaKnown RBP17.11■□□□□ 0.33
GABPA-202ENST00000400075 CYP46A1Q9Y6A2 500 aa17.11■□□□□ 0.33
GABPA-202ENST00000400075 HLA-DOAP06340 250 aa17.11■□□□□ 0.33
GABPA-202ENST00000400075 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
GABPA-202ENST00000400075 ZNF76P36508 570 aa17.1■□□□□ 0.33
GABPA-202ENST00000400075 KRT18P05783 430 aaKnown RBP17.1■□□□□ 0.33
GABPA-202ENST00000400075 MSNP26038 577 aaKnown RBP17.1■□□□□ 0.33
GABPA-202ENST00000400075 TXLNAP40222 546 aa17.1■□□□□ 0.33
GABPA-202ENST00000400075 CWC27Q6UX04 472 aaKnown RBP17.1■□□□□ 0.33
GABPA-202ENST00000400075 DDX49Q9Y6V7 483 aaKnown RBP17.1■□□□□ 0.33
GABPA-202ENST00000400075 CFAP65Q6ZU64 1925 aaKnown RBP17.1■□□□□ 0.33
GABPA-202ENST00000400075 PDCP20941 246 aa17.1■□□□□ 0.33
GABPA-202ENST00000400075 CFAP74Q9C0B2 1584 aa17.1■□□□□ 0.33
GABPA-202ENST00000400075 RBM26Q5T8P6 1007 aaKnown RBP17.09■□□□□ 0.33
GABPA-202ENST00000400075 BLOC1S2Q6QNY1 142 aa17.08■□□□□ 0.33
GABPA-202ENST00000400075 PLEKHG3A1L390 1219 aa17.08■□□□□ 0.32
GABPA-202ENST00000400075 RNMTO43148 476 aaKnown RBP17.08■□□□□ 0.32
GABPA-202ENST00000400075 RARSP54136 660 aaKnown RBP17.08■□□□□ 0.32
GABPA-202ENST00000400075 CHD1LQ86WJ1 897 aa17.08■□□□□ 0.32
GABPA-202ENST00000400075 F8W031 263 aaPredicted RBP17.07■□□□□ 0.32
GABPA-202ENST00000400075 CHMP4BP1P59074 171 aa17.07■□□□□ 0.32
GABPA-202ENST00000400075 ANKRD1Q15327 319 aa17.07■□□□□ 0.32
GABPA-202ENST00000400075 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
GABPA-202ENST00000400075 A0A1W2PP64 1363 aa17.07■□□□□ 0.32
GABPA-202ENST00000400075 KRT32Q14532 448 aa17.07■□□□□ 0.32
GABPA-202ENST00000400075 FLAD1Q8NFF5 587 aa17.07■□□□□ 0.32
GABPA-202ENST00000400075 SNRKQ9NRH2 765 aa17.07■□□□□ 0.32
GABPA-202ENST00000400075 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
GABPA-202ENST00000400075 RANBP6O60518 1105 aaKnown RBP17.06■□□□□ 0.32
GABPA-202ENST00000400075 KSR2Q6VAB6 950 aa17.06■□□□□ 0.32
GABPA-202ENST00000400075 CCDC87Q9NVE4 849 aa17.06■□□□□ 0.32
GABPA-202ENST00000400075 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
GABPA-202ENST00000400075 TTF1Q15361 905 aaPredicted RBP17.06■□□□□ 0.32
GABPA-202ENST00000400075 IPO7O95373 1038 aaKnown RBP17.06■□□□□ 0.32
GABPA-202ENST00000400075 UQCRFS1P1P0C7P4 283 aa17.06■□□□□ 0.32
GABPA-202ENST00000400075 ZGPATQ8N5A5 531 aaKnown RBP17.06■□□□□ 0.32
GABPA-202ENST00000400075 PIBF1Q8WXW3 757 aa17.06■□□□□ 0.32
GABPA-202ENST00000400075 H0YIN7 160 aa17.05■□□□□ 0.32
GABPA-202ENST00000400075 GSTO1P78417 241 aa17.05■□□□□ 0.32
GABPA-202ENST00000400075 LMBR1LQ6UX01 489 aa17.05■□□□□ 0.32
GABPA-202ENST00000400075 IPO9Q96P70 1041 aaKnown RBP17.05■□□□□ 0.32
GABPA-202ENST00000400075 MCM2P49736 904 aa17.05■□□□□ 0.32
GABPA-202ENST00000400075 ZNF804AQ7Z570 1209 aa17.05■□□□□ 0.32
GABPA-202ENST00000400075 CDKL5O76039 1030 aa17.05■□□□□ 0.32
GABPA-202ENST00000400075 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
GABPA-202ENST00000400075 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.05■□□□□ 0.32
GABPA-202ENST00000400075 MAP3K5Q99683 1374 aa17.05■□□□□ 0.32
GABPA-202ENST00000400075 NUCB2P80303 420 aa17.05■□□□□ 0.32
GABPA-202ENST00000400075 GJA3Q9Y6H8 435 aa17.05■□□□□ 0.32
GABPA-202ENST00000400075 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
GABPA-202ENST00000400075 IL16Q14005 1332 aa17.04■□□□□ 0.32
GABPA-202ENST00000400075 DDX11L8A8MPP1 907 aa17.04■□□□□ 0.32
GABPA-202ENST00000400075 IRS4O14654 1257 aaPredicted RBP17.04■□□□□ 0.32
GABPA-202ENST00000400075 MX1P20591 662 aa17.04■□□□□ 0.32
GABPA-202ENST00000400075 VEZTQ9HBM0 779 aa17.04■□□□□ 0.32
GABPA-202ENST00000400075 SDF4Q9BRK5 362 aa17.04■□□□□ 0.32
GABPA-202ENST00000400075 RNF41Q9H4P4 317 aaPredicted RBP17.04■□□□□ 0.32
GABPA-202ENST00000400075 SEC63Q9UGP8 760 aaKnown RBP17.04■□□□□ 0.32
GABPA-202ENST00000400075 IQSEC3Q9UPP2 1182 aaPredicted RBP17.04■□□□□ 0.32
GABPA-202ENST00000400075 KDM6BO15054 1643 aa17.04■□□□□ 0.32
GABPA-202ENST00000400075 CHD1O14646 1710 aa17.04■□□□□ 0.32
GABPA-202ENST00000400075 ATP2B3Q16720 1220 aa17.03■□□□□ 0.32
GABPA-202ENST00000400075 RBM17Q96I25 401 aaKnown RBP17.03■□□□□ 0.32
GABPA-202ENST00000400075 SBNO1A3KN83 1393 aa17.03■□□□□ 0.32
GABPA-202ENST00000400075 IBSPP21815 317 aaPredicted RBP17.03■□□□□ 0.32
GABPA-202ENST00000400075 STK3Q13188 491 aa17.03■□□□□ 0.32
GABPA-202ENST00000400075 ALDH1L1O75891 902 aa17.03■□□□□ 0.32
GABPA-202ENST00000400075 PARP10Q53GL7 1025 aa17.03■□□□□ 0.32
GABPA-202ENST00000400075 MLH3Q9UHC1 1453 aa17.03■□□□□ 0.32
GABPA-202ENST00000400075 RIMBP2O15034 1052 aa17.03■□□□□ 0.32
GABPA-202ENST00000400075 UGGT1Q9NYU2 1555 aa17.03■□□□□ 0.32
GABPA-202ENST00000400075 PLEKHG1Q9ULL1 1385 aa17.02■□□□□ 0.32
GABPA-202ENST00000400075 RALGAPBQ86X10 1494 aa17.02■□□□□ 0.32
GABPA-202ENST00000400075 CTCFLQ8NI51 663 aaPredicted RBP17.02■□□□□ 0.32
GABPA-202ENST00000400075 GRM8O00222 908 aa17.02■□□□□ 0.32
GABPA-202ENST00000400075 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
GABPA-202ENST00000400075 LINS1Q8NG48 757 aa17.02■□□□□ 0.32
GABPA-202ENST00000400075 EPS15P42566 896 aa17.02■□□□□ 0.31
GABPA-202ENST00000400075 KRT27Q7Z3Y8 459 aa17.02■□□□□ 0.31
GABPA-202ENST00000400075 TESK2Q96S53 571 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms