RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 NRXN2Q9P2S2 1712 aa24.89■■□□□ 1.58
UFD1-202ENST00000399523 C1orf141Q5JVX7 400 aa24.89■■□□□ 1.58
UFD1-202ENST00000399523 TTLL6Q8N841 843 aa24.89■■□□□ 1.58
UFD1-202ENST00000399523 SOS1Q07889 1333 aaPredicted RBP24.88■■□□□ 1.57
UFD1-202ENST00000399523 NFIXQ14938 502 aa24.88■■□□□ 1.57
UFD1-202ENST00000399523 TIAM2Q8IVF5 1701 aa24.87■■□□□ 1.57
UFD1-202ENST00000399523 NFKBIEO00221 500 aa24.86■■□□□ 1.57
UFD1-202ENST00000399523 DNAJC10Q8IXB1 793 aa24.86■■□□□ 1.57
UFD1-202ENST00000399523 NARFQ9UHQ1 456 aa24.86■■□□□ 1.57
UFD1-202ENST00000399523 AEBP1Q8IUX7 1158 aa24.85■■□□□ 1.57
UFD1-202ENST00000399523 DPY19L2Q6NUT2 758 aa24.84■■□□□ 1.57
UFD1-202ENST00000399523 SCN11AQ9UI33 1791 aa24.84■■□□□ 1.57
UFD1-202ENST00000399523 SERPINB2P05120 415 aa24.83■■□□□ 1.57
UFD1-202ENST00000399523 CYP19A1P11511 503 aaPredicted RBP24.83■■□□□ 1.57
UFD1-202ENST00000399523 CREBZFQ9NS37 354 aa24.83■■□□□ 1.57
UFD1-202ENST00000399523 C2CD5Q86YS7 1000 aa24.82■■□□□ 1.56
UFD1-202ENST00000399523 BCL2L12Q9HB09 334 aa24.82■■□□□ 1.56
UFD1-202ENST00000399523 H0YIN7 160 aa24.81■■□□□ 1.56
UFD1-202ENST00000399523 COL15A1P39059 1388 aa24.8■■□□□ 1.56
UFD1-202ENST00000399523 DICER1Q9UPY3 1922 aaKnown RBP24.8■■□□□ 1.56
UFD1-202ENST00000399523 SLC52A2Q9HAB3 445 aa24.79■■□□□ 1.56
UFD1-202ENST00000399523 CHADLQ6NUI6 762 aa24.78■■□□□ 1.56
UFD1-202ENST00000399523 MKRN1Q9UHC7 482 aaKnown RBP24.78■■□□□ 1.56
UFD1-202ENST00000399523 CARMIL3Q8ND23 1372 aa24.78■■□□□ 1.56
UFD1-202ENST00000399523 SULT6B1Q6IMI4 303 aa24.77■■□□□ 1.56
UFD1-202ENST00000399523 ZBTB1Q9Y2K1 713 aa24.77■■□□□ 1.56
UFD1-202ENST00000399523 ERFEQ4G0M1 354 aa24.76■■□□□ 1.55
UFD1-202ENST00000399523 AKAP4Q5JQC9 854 aa24.76■■□□□ 1.55
UFD1-202ENST00000399523 PRDM10Q9NQV6 1147 aa24.76■■□□□ 1.55
UFD1-202ENST00000399523 FER1L6Q2WGJ9 1857 aa24.76■■□□□ 1.55
UFD1-202ENST00000399523 FOXN1O15353 648 aa24.75■■□□□ 1.55
UFD1-202ENST00000399523 LGR6Q9HBX8 967 aa24.74■■□□□ 1.55
UFD1-202ENST00000399523 PDZRN3Q9UPQ7 1066 aa24.74■■□□□ 1.55
UFD1-202ENST00000399523 MRC1P22897 1456 aa24.73■■□□□ 1.55
UFD1-202ENST00000399523 CNTNAP1P78357 1384 aa24.73■■□□□ 1.55
UFD1-202ENST00000399523 SLC39A6Q13433 755 aa24.73■■□□□ 1.55
UFD1-202ENST00000399523 VSIG10Q8N0Z9 540 aa24.73■■□□□ 1.55
UFD1-202ENST00000399523 ANKRD31Q8N7Z5 1873 aa24.72■■□□□ 1.55
UFD1-202ENST00000399523 LTBP3Q9NS15 1303 aa24.72■■□□□ 1.55
UFD1-202ENST00000399523 C21orf2O43822 256 aa24.72■■□□□ 1.55
UFD1-202ENST00000399523 POTEIP0CG38 1075 aa24.72■■□□□ 1.55
UFD1-202ENST00000399523 POTEJP0CG39 1038 aa24.72■■□□□ 1.55
UFD1-202ENST00000399523 IL13P35225 146 aa24.71■■□□□ 1.55
UFD1-202ENST00000399523 ZNF622Q969S3 477 aaKnown RBP eCLIP24.71■■□□□ 1.554e-19■□□□□ 10.1
UFD1-202ENST00000399523 BRIP1Q9BX63 1249 aa24.71■■□□□ 1.55
UFD1-202ENST00000399523 PASKQ96RG2 1323 aa24.7■■□□□ 1.54
UFD1-202ENST00000399523 RNMTO43148 476 aaKnown RBP24.7■■□□□ 1.54
UFD1-202ENST00000399523 PDE6BP35913 854 aa24.7■■□□□ 1.54
UFD1-202ENST00000399523 DDNO94850 711 aaPredicted RBP24.69■■□□□ 1.54
UFD1-202ENST00000399523 SLC34A2O95436 690 aa24.69■■□□□ 1.54
UFD1-202ENST00000399523 EIF5P55010 431 aaKnown RBP24.69■■□□□ 1.54
UFD1-202ENST00000399523 BICDL1Q6ZP65 573 aa24.69■■□□□ 1.54
UFD1-202ENST00000399523 POLR3GLQ9BT43 218 aa24.69■■□□□ 1.54
UFD1-202ENST00000399523 CTCFP49711 727 aaPredicted RBP24.68■■□□□ 1.54
UFD1-202ENST00000399523 TAOK3Q9H2K8 898 aa24.68■■□□□ 1.54
UFD1-202ENST00000399523 PANK3Q9H999 370 aa24.68■■□□□ 1.54
UFD1-202ENST00000399523 VIRMAQ69YN4 1812 aaKnown RBP24.68■■□□□ 1.54
UFD1-202ENST00000399523 CANXP27824 592 aaKnown RBP24.67■■□□□ 1.54
UFD1-202ENST00000399523 TBC1D9BQ66K14 1250 aa24.67■■□□□ 1.54
UFD1-202ENST00000399523 ZNF219Q9P2Y4 722 aaPredicted RBP24.67■■□□□ 1.54
UFD1-202ENST00000399523 A0A087WZG4 1122 aa24.66■■□□□ 1.54
UFD1-202ENST00000399523 MORC1Q86VD1 984 aa24.66■■□□□ 1.54
UFD1-202ENST00000399523 COL11A2P13942 1736 aaPredicted RBP24.66■■□□□ 1.54
UFD1-202ENST00000399523 PRR5LQ6MZQ0 368 aa24.65■■□□□ 1.54
UFD1-202ENST00000399523 LDHDQ86WU2 507 aa24.65■■□□□ 1.54
UFD1-202ENST00000399523 AIDAQ96BJ3 306 aa24.65■■□□□ 1.54
UFD1-202ENST00000399523 IQCA1LA6NCM1 817 aa24.64■■□□□ 1.54
UFD1-202ENST00000399523 STARD3NLO95772 234 aa24.64■■□□□ 1.54
UFD1-202ENST00000399523 VEGFBP49765 207 aa24.64■■□□□ 1.54
UFD1-202ENST00000399523 L3MBTL3Q96JM7 780 aaPredicted RBP24.64■■□□□ 1.54
UFD1-202ENST00000399523 UBR2Q8IWV8 1755 aa24.64■■□□□ 1.53
UFD1-202ENST00000399523 SCN4AP35499 1836 aa24.63■■□□□ 1.53
UFD1-202ENST00000399523 SLX4Q8IY92 1834 aa24.63■■□□□ 1.53
UFD1-202ENST00000399523 WBP1LQ9NX94 342 aa24.63■■□□□ 1.53
UFD1-202ENST00000399523 ITGBL1O95965 494 aaPredicted RBP24.62■■□□□ 1.53
UFD1-202ENST00000399523 CNKSR1Q969H4 720 aa24.62■■□□□ 1.53
UFD1-202ENST00000399523 TAF1DQ9H5J8 278 aaPredicted RBP24.62■■□□□ 1.53
UFD1-202ENST00000399523 TMEM88BA6NKF7 163 aa24.61■■□□□ 1.53
UFD1-202ENST00000399523 SOGA3Q5TF21 947 aa24.61■■□□□ 1.53
UFD1-202ENST00000399523 STYK1Q6J9G0 422 aa24.61■■□□□ 1.53
UFD1-202ENST00000399523 CCDC24Q8N4L8 307 aa24.61■■□□□ 1.53
UFD1-202ENST00000399523 PRPF40BQ6NWY9 871 aaKnown RBP24.6■■□□□ 1.53
UFD1-202ENST00000399523 SCN7AQ01118 1682 aa24.59■■□□□ 1.53
UFD1-202ENST00000399523 SRGNP10124 158 aa24.59■■□□□ 1.53
UFD1-202ENST00000399523 LBX1P52954 281 aa24.59■■□□□ 1.53
UFD1-202ENST00000399523 MTHFSDQ2M296 383 aaKnown RBP24.58■■□□□ 1.53
UFD1-202ENST00000399523 TBC1D2BQ9UPU7 963 aa24.58■■□□□ 1.53
UFD1-202ENST00000399523 ARFGEF2Q9Y6D5 1785 aa24.57■■□□□ 1.52
UFD1-202ENST00000399523 TIMELESSQ9UNS1 1208 aa24.57■■□□□ 1.52
UFD1-202ENST00000399523 CACNA1SQ13698 1873 aa24.56■■□□□ 1.52
UFD1-202ENST00000399523 TTC5Q8N0Z6 440 aa24.56■■□□□ 1.52
UFD1-202ENST00000399523 CNBD1Q8NA66 436 aa24.56■■□□□ 1.52
UFD1-202ENST00000399523 C7orf43Q8WVR3 580 aa24.56■■□□□ 1.52
UFD1-202ENST00000399523 MASTLQ96GX5 879 aa24.56■■□□□ 1.52
UFD1-202ENST00000399523 SETDB2Q96T68 719 aa24.56■■□□□ 1.52
UFD1-202ENST00000399523 TEX13AQ9BXU3 409 aaPredicted RBP24.56■■□□□ 1.52
UFD1-202ENST00000399523 HMOX1P09601 288 aa24.55■■□□□ 1.52
UFD1-202ENST00000399523 IL6STP40189 918 aaPredicted RBP24.55■■□□□ 1.52
UFD1-202ENST00000399523 RASSF10A6NK89 507 aa24.54■■□□□ 1.52
UFD1-202ENST00000399523 ABHD8Q96I13 439 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms