RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 SPATA31A5Q5VU36 1347 aa11.87□□□□□ -0.51
LINC00243-201ENST00000399196 SPATA31A7Q8IWB4 1347 aa11.87□□□□□ -0.51
LINC00243-201ENST00000399196 HOXB7P09629 217 aa11.87□□□□□ -0.51
LINC00243-201ENST00000399196 EIF2S2P20042 333 aaKnown RBP11.87□□□□□ -0.51
LINC00243-201ENST00000399196 NFATC2IPQ8NCF5 419 aa11.87□□□□□ -0.51
LINC00243-201ENST00000399196 MEIS3Q99687 375 aa11.87□□□□□ -0.51
LINC00243-201ENST00000399196 KDM6AO15550 1401 aaPredicted RBP11.86□□□□□ -0.51
LINC00243-201ENST00000399196 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
LINC00243-201ENST00000399196 GLI3P10071 1580 aa11.85□□□□□ -0.51
LINC00243-201ENST00000399196 ANP32AP39687 249 aaKnown RBP11.85□□□□□ -0.51
LINC00243-201ENST00000399196 CABP4P57796 275 aa11.85□□□□□ -0.51
LINC00243-201ENST00000399196 FLIIQ13045 1269 aa11.85□□□□□ -0.51
LINC00243-201ENST00000399196 IPO9Q96P70 1041 aaKnown RBP11.85□□□□□ -0.51
LINC00243-201ENST00000399196 SCN11AQ9UI33 1791 aa11.85□□□□□ -0.51
LINC00243-201ENST00000399196 NUCB1Q02818 461 aa11.85□□□□□ -0.51
LINC00243-201ENST00000399196 FKBP5Q13451 457 aaPredicted RBP11.85□□□□□ -0.51
LINC00243-201ENST00000399196 VPS72Q15906 364 aa11.85□□□□□ -0.51
LINC00243-201ENST00000399196 TTC5Q8N0Z6 440 aa11.85□□□□□ -0.51
LINC00243-201ENST00000399196 PHAXQ9H814 394 aaKnown RBP11.85□□□□□ -0.51
LINC00243-201ENST00000399196 PRAMEF22A3QJZ6 481 aa11.84□□□□□ -0.51
LINC00243-201ENST00000399196 SLC39A6Q13433 755 aa11.84□□□□□ -0.51
LINC00243-201ENST00000399196 ZNF790Q6PG37 636 aa11.84□□□□□ -0.51
LINC00243-201ENST00000399196 SLC4A10Q6U841 1118 aa11.84□□□□□ -0.51
LINC00243-201ENST00000399196 LNPKQ9C0E8 428 aa11.84□□□□□ -0.51
LINC00243-201ENST00000399196 ATRNO75882 1429 aa11.84□□□□□ -0.51
LINC00243-201ENST00000399196 CCDC9Q9Y3X0 531 aaKnown RBP11.83□□□□□ -0.51
LINC00243-201ENST00000399196 N4BP2Q86UW6 1770 aaPredicted RBP11.83□□□□□ -0.52
LINC00243-201ENST00000399196 HEG1Q9ULI3 1381 aa11.83□□□□□ -0.52
LINC00243-201ENST00000399196 ANXA1P04083 346 aa11.83□□□□□ -0.52
LINC00243-201ENST00000399196 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
LINC00243-201ENST00000399196 CEP85Q6P2H3 762 aa11.82□□□□□ -0.52
LINC00243-201ENST00000399196 CHD1LQ86WJ1 897 aa11.82□□□□□ -0.52
LINC00243-201ENST00000399196 CHPF2Q9P2E5 772 aa11.82□□□□□ -0.52
LINC00243-201ENST00000399196 CCT4P50991 539 aaKnown RBP11.82□□□□□ -0.52
LINC00243-201ENST00000399196 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
LINC00243-201ENST00000399196 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
LINC00243-201ENST00000399196 THSD7AQ9UPZ6 1657 aa11.81□□□□□ -0.52
LINC00243-201ENST00000399196 ERVV-2B6SEH9 535 aa11.81□□□□□ -0.52
LINC00243-201ENST00000399196 FAM98CQ17RN3 349 aaKnown RBP11.81□□□□□ -0.52
LINC00243-201ENST00000399196 DBF4Q9UBU7 674 aaPredicted RBP11.81□□□□□ -0.52
LINC00243-201ENST00000399196 MRC1P22897 1456 aa11.81□□□□□ -0.52
LINC00243-201ENST00000399196 PROSER3Q2NL68 480 aa11.8□□□□□ -0.52
LINC00243-201ENST00000399196 ANKRD45Q5TZF3 282 aa11.8□□□□□ -0.52
LINC00243-201ENST00000399196 GCC1Q96CN9 775 aa11.8□□□□□ -0.52
LINC00243-201ENST00000399196 TNS2Q63HR2 1409 aa11.8□□□□□ -0.52
LINC00243-201ENST00000399196 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
LINC00243-201ENST00000399196 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
LINC00243-201ENST00000399196 FMNL2Q96PY5 1086 aa11.8□□□□□ -0.52
LINC00243-201ENST00000399196 DCTPP1Q9H773 170 aa11.8□□□□□ -0.52
LINC00243-201ENST00000399196 RGS17Q9UGC6 210 aaPredicted RBP11.8□□□□□ -0.52
LINC00243-201ENST00000399196 THRAP3Q9Y2W1 955 aaKnown RBP11.8□□□□□ -0.52
LINC00243-201ENST00000399196 NOP58Q9Y2X3 529 aaKnown RBP11.8□□□□□ -0.52
LINC00243-201ENST00000399196 C5P01031 1676 aa11.8□□□□□ -0.52
LINC00243-201ENST00000399196 TOGARAM1Q9Y4F4 1720 aa11.79□□□□□ -0.52
LINC00243-201ENST00000399196 EXOC5O00471 708 aa11.79□□□□□ -0.52
LINC00243-201ENST00000399196 ZNF496Q96IT1 587 aaPredicted RBP11.79□□□□□ -0.52
LINC00243-201ENST00000399196 GJD4Q96KN9 370 aaPredicted RBP11.79□□□□□ -0.52
LINC00243-201ENST00000399196 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
LINC00243-201ENST00000399196 QTRT2Q9H974 415 aaKnown RBP11.79□□□□□ -0.52
LINC00243-201ENST00000399196 TRPC5Q9UL62 973 aaPredicted RBP11.79□□□□□ -0.52
LINC00243-201ENST00000399196 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
LINC00243-201ENST00000399196 CDCA7Q9BWT1 371 aaPredicted RBP11.78□□□□□ -0.52
LINC00243-201ENST00000399196 C16orf71Q8IYS4 520 aaPredicted RBP11.77□□□□□ -0.52
LINC00243-201ENST00000399196 USP44Q9H0E7 712 aa11.77□□□□□ -0.52
LINC00243-201ENST00000399196 HYPKQ9NX55 129 aa11.77□□□□□ -0.52
LINC00243-201ENST00000399196 TMOD3Q9NYL9 352 aa11.77□□□□□ -0.52
LINC00243-201ENST00000399196 ADCY9O60503 1353 aa11.77□□□□□ -0.53
LINC00243-201ENST00000399196 PXDNLA1KZ92 1463 aa11.77□□□□□ -0.53
LINC00243-201ENST00000399196 PI4KAP2A4QPH2 592 aa11.76□□□□□ -0.53
LINC00243-201ENST00000399196 PDIA6Q15084 440 aa11.76□□□□□ -0.53
LINC00243-201ENST00000399196 PI4KAP1Q8N8J0 262 aa11.76□□□□□ -0.53
LINC00243-201ENST00000399196 OTUD7AQ8TE49 926 aaPredicted RBP11.76□□□□□ -0.53
LINC00243-201ENST00000399196 DDX21Q9NR30 783 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00243-201ENST00000399196 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
LINC00243-201ENST00000399196 SLC4A3P48751 1232 aa11.75□□□□□ -0.53
LINC00243-201ENST00000399196 DDB1Q16531 1140 aa11.75□□□□□ -0.53
LINC00243-201ENST00000399196 MARCH10Q8NA82 808 aaPredicted RBP11.75□□□□□ -0.53
LINC00243-201ENST00000399196 DNAAF4Q8WXU2 420 aa11.75□□□□□ -0.53
LINC00243-201ENST00000399196 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
LINC00243-201ENST00000399196 SMARCA5O60264 1052 aaPredicted RBP11.75□□□□□ -0.53
LINC00243-201ENST00000399196 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
LINC00243-201ENST00000399196 DDX58O95786 925 aaKnown RBP11.75□□□□□ -0.53
LINC00243-201ENST00000399196 GNAI3P08754 354 aa11.75□□□□□ -0.53
LINC00243-201ENST00000399196 MYL6BP14649 208 aa11.75□□□□□ -0.53
LINC00243-201ENST00000399196 AIMP1Q12904 312 aaKnown RBP11.75□□□□□ -0.53
LINC00243-201ENST00000399196 SRCIN1Q9C0H9 1055 aa11.75□□□□□ -0.53
LINC00243-201ENST00000399196 ONECUT3O60422 494 aaPredicted RBP11.74□□□□□ -0.53
LINC00243-201ENST00000399196 GNAI2P04899 355 aa11.74□□□□□ -0.53
LINC00243-201ENST00000399196 BEND3Q5T5X7 828 aa11.74□□□□□ -0.53
LINC00243-201ENST00000399196 ZNF772Q68DY9 489 aaPredicted RBP11.74□□□□□ -0.53
LINC00243-201ENST00000399196 POTEAQ6S8J7 498 aa11.74□□□□□ -0.53
LINC00243-201ENST00000399196 PLEKHM2Q8IWE5 1019 aa11.74□□□□□ -0.53
LINC00243-201ENST00000399196 USP16Q9Y5T5 823 aa11.74□□□□□ -0.53
LINC00243-201ENST00000399196 LRRFIP2Q9Y608 721 aaKnown RBP11.74□□□□□ -0.53
LINC00243-201ENST00000399196 DOT1LQ8TEK3 1739 aa11.74□□□□□ -0.53
LINC00243-201ENST00000399196 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
LINC00243-201ENST00000399196 APBB1O00213 710 aa11.74□□□□□ -0.53
LINC00243-201ENST00000399196 PAXIP1Q6ZW49 1069 aaPredicted RBP11.74□□□□□ -0.53
LINC00243-201ENST00000399196 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
LINC00243-201ENST00000399196 A0A0G2JS52 829 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms