RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NLRP2Q9NX02 1062 aa21.79■■□□□ 1.08
HLA-DQB1-204ENST00000399084 PNMA6EA0A0J9YXQ4 647 aa21.78■■□□□ 1.08
HLA-DQB1-204ENST00000399084 MX1P20591 662 aa21.78■■□□□ 1.08
HLA-DQB1-204ENST00000399084 DDX21Q9NR30 783 aaKnown RBP eCLIP21.78■■□□□ 1.08
HLA-DQB1-204ENST00000399084 ERC2O15083 957 aa21.77■■□□□ 1.08
HLA-DQB1-204ENST00000399084 KCNQ3O43525 872 aa21.77■■□□□ 1.08
HLA-DQB1-204ENST00000399084 SLC52A2Q9HAB3 445 aa21.77■■□□□ 1.08
HLA-DQB1-204ENST00000399084 EXOC6BQ9Y2D4 811 aa21.77■■□□□ 1.08
HLA-DQB1-204ENST00000399084 RGPD5Q99666 1765 aa21.77■■□□□ 1.08
HLA-DQB1-204ENST00000399084 OTUD7AQ8TE49 926 aaPredicted RBP21.77■■□□□ 1.08
HLA-DQB1-204ENST00000399084 DCAF5Q96JK2 942 aa21.77■■□□□ 1.08
HLA-DQB1-204ENST00000399084 PHKG2P15735 406 aa21.76■■□□□ 1.07
HLA-DQB1-204ENST00000399084 SCN11AQ9UI33 1791 aa21.76■■□□□ 1.07
HLA-DQB1-204ENST00000399084 CRYBG1Q9Y4K1 1723 aa21.75■■□□□ 1.07
HLA-DQB1-204ENST00000399084 ADCY9O60503 1353 aa21.75■■□□□ 1.07
HLA-DQB1-204ENST00000399084 K7ELQ4 463 aaPredicted RBP21.75■■□□□ 1.07
HLA-DQB1-204ENST00000399084 DDIT3P35638 169 aa21.75■■□□□ 1.07
HLA-DQB1-204ENST00000399084 ZNF790Q6PG37 636 aa21.75■■□□□ 1.07
HLA-DQB1-204ENST00000399084 KIF1BPQ96EK5 621 aa21.75■■□□□ 1.07
HLA-DQB1-204ENST00000399084 APBB1O00213 710 aa21.75■■□□□ 1.07
HLA-DQB1-204ENST00000399084 PPP1R42Q7Z4L9 355 aa21.75■■□□□ 1.07
HLA-DQB1-204ENST00000399084 LINS1Q8NG48 757 aa21.74■■□□□ 1.07
HLA-DQB1-204ENST00000399084 MRC1P22897 1456 aa21.73■■□□□ 1.07
HLA-DQB1-204ENST00000399084 UTYO14607 1347 aa21.73■■□□□ 1.07
HLA-DQB1-204ENST00000399084 CSB-PGBD3P0DP91 1061 aa21.72■■□□□ 1.07
HLA-DQB1-204ENST00000399084 PTMSP20962 102 aa21.72■■□□□ 1.07
HLA-DQB1-204ENST00000399084 SRGAP3O43295 1099 aa21.72■■□□□ 1.07
HLA-DQB1-204ENST00000399084 SURF6O75683 361 aaKnown RBP21.72■■□□□ 1.07
HLA-DQB1-204ENST00000399084 ERC1Q8IUD2 1116 aa21.72■■□□□ 1.07
HLA-DQB1-204ENST00000399084 MAP3K2Q9Y2U5 619 aa21.71■■□□□ 1.07
HLA-DQB1-204ENST00000399084 NBPF7P0C2Y1 421 aaPredicted RBP21.7■■□□□ 1.06
HLA-DQB1-204ENST00000399084 LARP1Q6PKG0 1096 aaKnown RBP21.7■■□□□ 1.06
HLA-DQB1-204ENST00000399084 RHPN1Q8TCX5 695 aa21.7■■□□□ 1.06
HLA-DQB1-204ENST00000399084 C9orf78Q9NZ63 289 aaPredicted RBP21.7■■□□□ 1.06
HLA-DQB1-204ENST00000399084 PKD1L3Q7Z443 1732 aa21.7■■□□□ 1.06
HLA-DQB1-204ENST00000399084 KDM6AO15550 1401 aaPredicted RBP21.7■■□□□ 1.06
HLA-DQB1-204ENST00000399084 ST18O60284 1047 aa21.69■■□□□ 1.06
HLA-DQB1-204ENST00000399084 HSP90AA1P07900 732 aaKnown RBP21.69■■□□□ 1.06
HLA-DQB1-204ENST00000399084 MCCP23508 829 aa21.69■■□□□ 1.06
HLA-DQB1-204ENST00000399084 MCM4P33991 863 aa21.69■■□□□ 1.06
HLA-DQB1-204ENST00000399084 ANAPC15P60006 121 aa21.69■■□□□ 1.06
HLA-DQB1-204ENST00000399084 BRINP3Q76B58 766 aa21.69■■□□□ 1.06
HLA-DQB1-204ENST00000399084 IL17RAQ96F46 866 aa21.69■■□□□ 1.06
HLA-DQB1-204ENST00000399084 SOS2Q07890 1332 aaPredicted RBP21.69■■□□□ 1.06
HLA-DQB1-204ENST00000399084 USP42Q9H9J4 1324 aaKnown RBP21.69■■□□□ 1.06
HLA-DQB1-204ENST00000399084 DDX11L8A8MPP1 907 aa21.68■■□□□ 1.06
HLA-DQB1-204ENST00000399084 SNRPA1P09661 255 aaKnown RBP21.68■■□□□ 1.06
HLA-DQB1-204ENST00000399084 MEGF6O75095 1541 aa21.68■■□□□ 1.06
HLA-DQB1-204ENST00000399084 TUBGCP6Q96RT7 1819 aa21.67■■□□□ 1.06
HLA-DQB1-204ENST00000399084 TTC41PQ6P2S7 1318 aa21.67■■□□□ 1.06
HLA-DQB1-204ENST00000399084 MCM2P49736 904 aa21.67■■□□□ 1.06
HLA-DQB1-204ENST00000399084 NEXNQ0ZGT2 675 aa21.66■■□□□ 1.06
HLA-DQB1-204ENST00000399084 TTC5Q8N0Z6 440 aa21.66■■□□□ 1.06
HLA-DQB1-204ENST00000399084 ESYT1Q9BSJ8 1104 aa21.66■■□□□ 1.06
HLA-DQB1-204ENST00000399084 ERBB4Q15303 1308 aa21.66■■□□□ 1.06
HLA-DQB1-204ENST00000399084 PLEKHG5O94827 1062 aa21.66■■□□□ 1.06
HLA-DQB1-204ENST00000399084 PDIA6Q15084 440 aa21.66■■□□□ 1.06
HLA-DQB1-204ENST00000399084 NFATC2IPQ8NCF5 419 aa21.66■■□□□ 1.06
HLA-DQB1-204ENST00000399084 FMNL2Q96PY5 1086 aa21.66■■□□□ 1.06
HLA-DQB1-204ENST00000399084 CWC22Q9HCG8 908 aaKnown RBP21.66■■□□□ 1.06
HLA-DQB1-204ENST00000399084 XIRP1Q702N8 1843 aaKnown RBP21.65■■□□□ 1.06
HLA-DQB1-204ENST00000399084 PARP4Q9UKK3 1724 aaKnown RBP21.65■■□□□ 1.06
HLA-DQB1-204ENST00000399084 GRM8O00222 908 aa21.65■■□□□ 1.06
HLA-DQB1-204ENST00000399084 CHMLP26374 656 aa21.65■■□□□ 1.06
HLA-DQB1-204ENST00000399084 HSPA2P54652 639 aa21.65■■□□□ 1.06
HLA-DQB1-204ENST00000399084 GBP4Q96PP9 640 aa21.65■■□□□ 1.06
HLA-DQB1-204ENST00000399084 WDR17Q8IZU2 1322 aa21.64■■□□□ 1.06
HLA-DQB1-204ENST00000399084 SLAIN2Q9P270 581 aa21.64■■□□□ 1.06
HLA-DQB1-204ENST00000399084 CLASRPQ8N2M8 674 aaKnown RBP21.63■■□□□ 1.05
HLA-DQB1-204ENST00000399084 DDX17Q92841 729 aaKnown RBP21.63■■□□□ 1.05
HLA-DQB1-204ENST00000399084 CYP27B1O15528 508 aa21.63■■□□□ 1.05
HLA-DQB1-204ENST00000399084 RAB3GAP1Q15042 981 aa21.63■■□□□ 1.05
HLA-DQB1-204ENST00000399084 PROSER3Q2NL68 480 aa21.63■■□□□ 1.05
HLA-DQB1-204ENST00000399084 CLEC17AQ6ZS10 378 aa21.63■■□□□ 1.05
HLA-DQB1-204ENST00000399084 SPRYD3Q8NCJ5 442 aa21.63■■□□□ 1.05
HLA-DQB1-204ENST00000399084 CABLES1Q8TDN4 633 aa21.63■■□□□ 1.05
HLA-DQB1-204ENST00000399084 GPATCH3Q96I76 525 aa21.63■■□□□ 1.05
HLA-DQB1-204ENST00000399084 COL15A1P39059 1388 aa21.62■■□□□ 1.05
HLA-DQB1-204ENST00000399084 TRIM6-TRIM34B2RNG4 842 aa21.62■■□□□ 1.05
HLA-DQB1-204ENST00000399084 GLRX3O76003 335 aaKnown RBP21.62■■□□□ 1.05
HLA-DQB1-204ENST00000399084 ANXA1P04083 346 aa21.62■■□□□ 1.05
HLA-DQB1-204ENST00000399084 RIC3Q7Z5B4 369 aa21.62■■□□□ 1.05
HLA-DQB1-204ENST00000399084 CERKQ8TCT0 537 aa21.62■■□□□ 1.05
HLA-DQB1-204ENST00000399084 PCDH11XQ9BZA7 1347 aa21.61■■□□□ 1.05
HLA-DQB1-204ENST00000399084 PCDH11YQ9BZA8 1340 aa21.61■■□□□ 1.05
HLA-DQB1-204ENST00000399084 ERVV-2B6SEH9 535 aa21.61■■□□□ 1.05
HLA-DQB1-204ENST00000399084 CABP4P57796 275 aa21.61■■□□□ 1.05
HLA-DQB1-204ENST00000399084 CNTROBQ8N137 903 aa21.61■■□□□ 1.05
HLA-DQB1-204ENST00000399084 NUCB2P80303 420 aa21.6■■□□□ 1.05
HLA-DQB1-204ENST00000399084 METTL22Q9BUU2 404 aaPredicted RBP21.6■■□□□ 1.05
HLA-DQB1-204ENST00000399084 BCL11AQ9H165 835 aa21.6■■□□□ 1.05
HLA-DQB1-204ENST00000399084 PRDM11Q9NQV5 511 aa21.6■■□□□ 1.05
HLA-DQB1-204ENST00000399084 NKX1-1Q15270 411 aaPredicted RBP21.6■■□□□ 1.05
HLA-DQB1-204ENST00000399084 CHRNA2Q15822 529 aa21.6■■□□□ 1.05
HLA-DQB1-204ENST00000399084 SKOR2Q2VWA4 1001 aaPredicted RBP21.6■■□□□ 1.05
HLA-DQB1-204ENST00000399084 PI4K2BQ8TCG2 481 aa21.6■■□□□ 1.05
HLA-DQB1-204ENST00000399084 RILPL2Q969X0 211 aa21.6■■□□□ 1.05
HLA-DQB1-204ENST00000399084 ZNF496Q96IT1 587 aaPredicted RBP21.6■■□□□ 1.05
HLA-DQB1-204ENST00000399084 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
HLA-DQB1-204ENST00000399084 OS9Q13438 667 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms