RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 DLG5Q8TDM6 1919 aa11.47□□□□□ -0.57
BRCC3-206ENST00000399042 SHANK3Q9BYB0 1731 aa11.46□□□□□ -0.57
BRCC3-206ENST00000399042 GIGYF1O75420 1035 aaPredicted RBP11.46□□□□□ -0.57
BRCC3-206ENST00000399042 CANXP27824 592 aaKnown RBP11.46□□□□□ -0.57
BRCC3-206ENST00000399042 KCNQ4P56696 695 aa11.46□□□□□ -0.57
BRCC3-206ENST00000399042 EN1Q05925 392 aaPredicted RBP11.46□□□□□ -0.57
BRCC3-206ENST00000399042 CCDC30Q5VVM6 783 aa11.46□□□□□ -0.57
BRCC3-206ENST00000399042 VSIG10Q8N0Z9 540 aa11.46□□□□□ -0.57
BRCC3-206ENST00000399042 BRWD3Q6RI45 1802 aa11.46□□□□□ -0.58
BRCC3-206ENST00000399042 MRC1P22897 1456 aa11.45□□□□□ -0.58
BRCC3-206ENST00000399042 HEG1Q9ULI3 1381 aa11.45□□□□□ -0.58
BRCC3-206ENST00000399042 TCERG1O14776 1098 aaKnown RBP11.45□□□□□ -0.58
BRCC3-206ENST00000399042 CT47B1P0C2W7 299 aaPredicted RBP11.45□□□□□ -0.58
BRCC3-206ENST00000399042 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
BRCC3-206ENST00000399042 SLC27A3Q5K4L6 730 aa11.45□□□□□ -0.58
BRCC3-206ENST00000399042 DNAJC10Q8IXB1 793 aa11.45□□□□□ -0.58
BRCC3-206ENST00000399042 TRMT2AQ8IZ69 625 aaKnown RBP11.45□□□□□ -0.58
BRCC3-206ENST00000399042 TSPYL6Q8N831 410 aa11.45□□□□□ -0.58
BRCC3-206ENST00000399042 DOT1LQ8TEK3 1739 aa11.45□□□□□ -0.58
BRCC3-206ENST00000399042 SCN11AQ9UI33 1791 aa11.44□□□□□ -0.58
BRCC3-206ENST00000399042 SOS1Q07889 1333 aaPredicted RBP11.44□□□□□ -0.58
BRCC3-206ENST00000399042 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
BRCC3-206ENST00000399042 PLSCR1O15162 318 aa11.44□□□□□ -0.58
BRCC3-206ENST00000399042 HOXB7P09629 217 aa11.44□□□□□ -0.58
BRCC3-206ENST00000399042 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
BRCC3-206ENST00000399042 AK7Q96M32 723 aa11.44□□□□□ -0.58
BRCC3-206ENST00000399042 SMC4Q9NTJ3 1288 aa11.44□□□□□ -0.58
BRCC3-206ENST00000399042 USP16Q9Y5T5 823 aa11.44□□□□□ -0.58
BRCC3-206ENST00000399042 VAMP4O75379 141 aa11.43□□□□□ -0.58
BRCC3-206ENST00000399042 MYL6BP14649 208 aa11.43□□□□□ -0.58
BRCC3-206ENST00000399042 ILDR2Q71H61 639 aa11.43□□□□□ -0.58
BRCC3-206ENST00000399042 DEFB132Q7Z7B7 95 aa11.43□□□□□ -0.58
BRCC3-206ENST00000399042 RCAN3Q9UKA8 241 aa11.43□□□□□ -0.58
BRCC3-206ENST00000399042 A1BGP04217 495 aa11.42□□□□□ -0.58
BRCC3-206ENST00000399042 EZH2Q15910 746 aaKnown RBP11.42□□□□□ -0.58
BRCC3-206ENST00000399042 FRAT1Q92837 279 aaPredicted RBP11.42□□□□□ -0.58
BRCC3-206ENST00000399042 UPF1Q92900 1129 aaKnown RBP eCLIP11.42□□□□□ -0.58
BRCC3-206ENST00000399042 ZNF428Q96B54 188 aa11.42□□□□□ -0.58
BRCC3-206ENST00000399042 BCL2L13Q9BXK5 485 aa11.42□□□□□ -0.58
BRCC3-206ENST00000399042 DBF4Q9UBU7 674 aaPredicted RBP11.42□□□□□ -0.58
BRCC3-206ENST00000399042 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
BRCC3-206ENST00000399042 TOGARAM1Q9Y4F4 1720 aa11.41□□□□□ -0.58
BRCC3-206ENST00000399042 NHSQ6T4R5 1651 aa11.41□□□□□ -0.58
BRCC3-206ENST00000399042 GNPATO15228 680 aa11.41□□□□□ -0.58
BRCC3-206ENST00000399042 CRKLP46109 303 aaKnown RBP11.41□□□□□ -0.58
BRCC3-206ENST00000399042 PIP4K2AP48426 406 aaPredicted RBP11.41□□□□□ -0.58
BRCC3-206ENST00000399042 AIMP1Q12904 312 aaKnown RBP11.41□□□□□ -0.58
BRCC3-206ENST00000399042 ITPK1Q13572 414 aa11.41□□□□□ -0.58
BRCC3-206ENST00000399042 NBPF14Q5TI25 921 aa11.41□□□□□ -0.58
BRCC3-206ENST00000399042 CCDC87Q9NVE4 849 aa11.41□□□□□ -0.58
BRCC3-206ENST00000399042 TFCP2L1Q9NZI6 479 aa11.41□□□□□ -0.58
BRCC3-206ENST00000399042 CHPF2Q9P2E5 772 aa11.41□□□□□ -0.58
BRCC3-206ENST00000399042 ADAMTS7Q9UKP4 1686 aa11.4□□□□□ -0.58
BRCC3-206ENST00000399042 CYP19A1P11511 503 aaPredicted RBP11.4□□□□□ -0.58
BRCC3-206ENST00000399042 ALDH1L2Q3SY69 923 aa11.4□□□□□ -0.58
BRCC3-206ENST00000399042 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.4□□□□□ -0.58
BRCC3-206ENST00000399042 LINC00116Q8NCU8 138 aa11.4□□□□□ -0.58
BRCC3-206ENST00000399042 SLC4A9Q96Q91 983 aa11.4□□□□□ -0.58
BRCC3-206ENST00000399042 HYPKQ9NX55 129 aa11.4□□□□□ -0.58
BRCC3-206ENST00000399042 STK32BQ9NY57 414 aa11.4□□□□□ -0.58
BRCC3-206ENST00000399042 RTCBQ9Y3I0 505 aaKnown RBP11.4□□□□□ -0.58
BRCC3-206ENST00000399042 IPO8O15397 1037 aaKnown RBP11.39□□□□□ -0.59
BRCC3-206ENST00000399042 PHF14O94880 888 aa11.39□□□□□ -0.59
BRCC3-206ENST00000399042 DDX58O95786 925 aaKnown RBP11.39□□□□□ -0.59
BRCC3-206ENST00000399042 ANXA1P04083 346 aa11.39□□□□□ -0.59
BRCC3-206ENST00000399042 RARSP54136 660 aaKnown RBP11.39□□□□□ -0.59
BRCC3-206ENST00000399042 KIF6Q6ZMV9 814 aa11.39□□□□□ -0.59
BRCC3-206ENST00000399042 SSH1Q8WYL5 1049 aa11.39□□□□□ -0.59
BRCC3-206ENST00000399042 CAMKK2Q96RR4 588 aa11.39□□□□□ -0.59
BRCC3-206ENST00000399042 DDX21Q9NR30 783 aaKnown RBP eCLIP11.39□□□□□ -0.59
BRCC3-206ENST00000399042 LRRC4BQ9NT99 713 aa11.39□□□□□ -0.59
BRCC3-206ENST00000399042 ITGB4P16144 1822 aa11.39□□□□□ -0.59
BRCC3-206ENST00000399042 ERBB4Q15303 1308 aa11.38□□□□□ -0.59
BRCC3-206ENST00000399042 A0A087WZG4 1122 aa11.38□□□□□ -0.59
BRCC3-206ENST00000399042 FKBP5Q13451 457 aaPredicted RBP11.38□□□□□ -0.59
BRCC3-206ENST00000399042 TRAPPC3LQ5T215 181 aa11.38□□□□□ -0.59
BRCC3-206ENST00000399042 ZBTB1Q9Y2K1 713 aa11.38□□□□□ -0.59
BRCC3-206ENST00000399042 KCPQ6ZWJ8 1503 aa11.38□□□□□ -0.59
BRCC3-206ENST00000399042 BTAF1O14981 1849 aa11.37□□□□□ -0.59
BRCC3-206ENST00000399042 ZPR1O75312 459 aa11.37□□□□□ -0.59
BRCC3-206ENST00000399042 BCAR3O75815 825 aa11.37□□□□□ -0.59
BRCC3-206ENST00000399042 RFC4P35249 363 aa11.37□□□□□ -0.59
BRCC3-206ENST00000399042 RC3H1Q5TC82 1133 aaKnown RBP11.37□□□□□ -0.59
BRCC3-206ENST00000399042 RIC3Q7Z5B4 369 aa11.37□□□□□ -0.59
BRCC3-206ENST00000399042 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
BRCC3-206ENST00000399042 KIF16BQ96L93 1317 aa11.36□□□□□ -0.59
BRCC3-206ENST00000399042 CNTNAP4Q9C0A0 1308 aa11.36□□□□□ -0.59
BRCC3-206ENST00000399042 RPS6KA4O75676 772 aa11.36□□□□□ -0.59
BRCC3-206ENST00000399042 IL6STP40189 918 aaPredicted RBP11.36□□□□□ -0.59
BRCC3-206ENST00000399042 PROSER3Q2NL68 480 aa11.36□□□□□ -0.59
BRCC3-206ENST00000399042 INTS5Q6P9B9 1019 aaKnown RBP11.36□□□□□ -0.59
BRCC3-206ENST00000399042 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
BRCC3-206ENST00000399042 FTSJ3Q8IY81 847 aaKnown RBP11.36□□□□□ -0.59
BRCC3-206ENST00000399042 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
BRCC3-206ENST00000399042 NOB1Q9ULX3 412 aaKnown RBP11.36□□□□□ -0.59
BRCC3-206ENST00000399042 NBPF26B4DH59 902 aa11.35□□□□□ -0.59
BRCC3-206ENST00000399042 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
BRCC3-206ENST00000399042 FLIIQ13045 1269 aa11.35□□□□□ -0.59
BRCC3-206ENST00000399042 ZKSCAN2Q63HK3 967 aa11.35□□□□□ -0.59
BRCC3-206ENST00000399042 NBPF10Q6P3W6 841 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms