RNA–Protein interactions for RNA: ENST00000398486.2

KRT40-202, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-202ENST00000398486 FAM196AQ6ZSG2 479 aa16.64■□□□□ 0.25
KRT40-202ENST00000398486 G2E3Q7L622 706 aa16.64■□□□□ 0.25
KRT40-202ENST00000398486 KIF16BQ96L93 1317 aa16.64■□□□□ 0.25
KRT40-202ENST00000398486 ANXA1P04083 346 aa16.64■□□□□ 0.25
KRT40-202ENST00000398486 PDIA6Q15084 440 aa16.64■□□□□ 0.25
KRT40-202ENST00000398486 FRAT1Q92837 279 aaPredicted RBP16.64■□□□□ 0.25
KRT40-202ENST00000398486 NOB1Q9ULX3 412 aaKnown RBP16.64■□□□□ 0.25
KRT40-202ENST00000398486 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
KRT40-202ENST00000398486 VSIG10Q8N0Z9 540 aa16.63■□□□□ 0.25
KRT40-202ENST00000398486 RBM42Q9BTD8 480 aaKnown RBP16.63■□□□□ 0.25
KRT40-202ENST00000398486 RLBP1P12271 317 aa16.62■□□□□ 0.25
KRT40-202ENST00000398486 TRIM27P14373 513 aa16.62■□□□□ 0.25
KRT40-202ENST00000398486 LRP10Q7Z4F1 713 aa16.62■□□□□ 0.25
KRT40-202ENST00000398486 DNAJC10Q8IXB1 793 aa16.62■□□□□ 0.25
KRT40-202ENST00000398486 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
KRT40-202ENST00000398486 BCL11BQ9C0K0 894 aaPredicted RBP16.62■□□□□ 0.25
KRT40-202ENST00000398486 LOC102724428A0A0B4J2F2 783 aa16.61■□□□□ 0.25
KRT40-202ENST00000398486 SIK1P57059 783 aa16.61■□□□□ 0.25
KRT40-202ENST00000398486 STK31Q9BXU1 1019 aa16.61■□□□□ 0.25
KRT40-202ENST00000398486 PIP4K2AP48426 406 aaPredicted RBP16.61■□□□□ 0.25
KRT40-202ENST00000398486 TRIM37O94972 964 aa16.6■□□□□ 0.25
KRT40-202ENST00000398486 ITPK1Q13572 414 aa16.6■□□□□ 0.25
KRT40-202ENST00000398486 ATF7IPQ6VMQ6 1270 aa16.6■□□□□ 0.25
KRT40-202ENST00000398486 SMARCC1Q92922 1105 aaPredicted RBP16.6■□□□□ 0.25
KRT40-202ENST00000398486 PHAXQ9H814 394 aaKnown RBP16.6■□□□□ 0.25
KRT40-202ENST00000398486 NUP188Q5SRE5 1749 aa16.6■□□□□ 0.25
KRT40-202ENST00000398486 RGPD3A6NKT7 1758 aaPredicted RBP16.59■□□□□ 0.25
KRT40-202ENST00000398486 RGPD4Q7Z3J3 1758 aa16.59■□□□□ 0.25
KRT40-202ENST00000398486 NBPF26B4DH59 902 aa16.59■□□□□ 0.25
KRT40-202ENST00000398486 FLIIQ13045 1269 aa16.59■□□□□ 0.25
KRT40-202ENST00000398486 NBPF14Q5TI25 921 aa16.59■□□□□ 0.25
KRT40-202ENST00000398486 ZKSCAN2Q63HK3 967 aa16.59■□□□□ 0.25
KRT40-202ENST00000398486 NBPF10Q6P3W6 841 aaKnown RBP16.59■□□□□ 0.25
KRT40-202ENST00000398486 NBPF15Q8N660 670 aa16.59■□□□□ 0.25
KRT40-202ENST00000398486 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.59■□□□□ 0.25
KRT40-202ENST00000398486 PANK1Q8TE04 598 aa16.59■□□□□ 0.25
KRT40-202ENST00000398486 DBF4Q9UBU7 674 aaPredicted RBP16.59■□□□□ 0.25
KRT40-202ENST00000398486 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
KRT40-202ENST00000398486 CANXP27824 592 aaKnown RBP16.59■□□□□ 0.25
KRT40-202ENST00000398486 CLUAP1Q96AJ1 413 aa16.59■□□□□ 0.25
KRT40-202ENST00000398486 DDX21Q9NR30 783 aaKnown RBP eCLIP16.59■□□□□ 0.25
KRT40-202ENST00000398486 ABCC4O15439 1325 aa16.58■□□□□ 0.25
KRT40-202ENST00000398486 A1BGP04217 495 aa16.58■□□□□ 0.24
KRT40-202ENST00000398486 CYP19A1P11511 503 aaPredicted RBP16.58■□□□□ 0.24
KRT40-202ENST00000398486 ARHGAP45Q92619 1136 aa16.58■□□□□ 0.24
KRT40-202ENST00000398486 ERBB4Q15303 1308 aa16.58■□□□□ 0.24
KRT40-202ENST00000398486 KCNQ4P56696 695 aa16.57■□□□□ 0.24
KRT40-202ENST00000398486 PTPRCP08575 1304 aa16.57■□□□□ 0.24
KRT40-202ENST00000398486 ATP6V1AP38606 617 aa16.56■□□□□ 0.24
KRT40-202ENST00000398486 PDE3AQ14432 1141 aa16.56■□□□□ 0.24
KRT40-202ENST00000398486 ADCY9O60503 1353 aa16.56■□□□□ 0.24
KRT40-202ENST00000398486 MYL6BP14649 208 aa16.56■□□□□ 0.24
KRT40-202ENST00000398486 CRBNQ96SW2 442 aa16.56■□□□□ 0.24
KRT40-202ENST00000398486 TEX13AQ9BXU3 409 aaPredicted RBP16.56■□□□□ 0.24
KRT40-202ENST00000398486 CHMP4AQ9BY43 222 aa16.56■□□□□ 0.24
KRT40-202ENST00000398486 C4BP0C0L5 1744 aa16.55■□□□□ 0.24
KRT40-202ENST00000398486 IPO8O15397 1037 aaKnown RBP16.55■□□□□ 0.24
KRT40-202ENST00000398486 DZIP1LQ8IYY4 767 aaKnown RBP16.55■□□□□ 0.24
KRT40-202ENST00000398486 LINC00116Q8NCU8 138 aa16.55■□□□□ 0.24
KRT40-202ENST00000398486 HYPKQ9NX55 129 aa16.55■□□□□ 0.24
KRT40-202ENST00000398486 ZBTB1Q9Y2K1 713 aa16.55■□□□□ 0.24
KRT40-202ENST00000398486 PXDNLA1KZ92 1463 aa16.55■□□□□ 0.24
KRT40-202ENST00000398486 F6X3S4 739 aa16.54■□□□□ 0.24
KRT40-202ENST00000398486 FKBP5Q13451 457 aaPredicted RBP16.54■□□□□ 0.24
KRT40-202ENST00000398486 STARD3NLO95772 234 aa16.54■□□□□ 0.24
KRT40-202ENST00000398486 EXOC6Q8TAG9 804 aa16.54■□□□□ 0.24
KRT40-202ENST00000398486 LRRC4BQ9NT99 713 aa16.54■□□□□ 0.24
KRT40-202ENST00000398486 CRKLP46109 303 aaKnown RBP16.53■□□□□ 0.24
KRT40-202ENST00000398486 ERICH6BQ5W0A0 696 aa16.53■□□□□ 0.24
KRT40-202ENST00000398486 INTS5Q6P9B9 1019 aaKnown RBP16.53■□□□□ 0.24
KRT40-202ENST00000398486 FTSJ3Q8IY81 847 aaKnown RBP16.53■□□□□ 0.24
KRT40-202ENST00000398486 TMEM57Q8N5G2 664 aa16.53■□□□□ 0.24
KRT40-202ENST00000398486 XAGE3Q8WTP9 111 aa16.53■□□□□ 0.24
KRT40-202ENST00000398486 API5Q9BZZ5 524 aaKnown RBP16.53■□□□□ 0.24
KRT40-202ENST00000398486 COG6Q9Y2V7 657 aa16.53■□□□□ 0.24
KRT40-202ENST00000398486 UBR3Q6ZT12 1888 aa16.52■□□□□ 0.24
KRT40-202ENST00000398486 CCNL1Q9UK58 526 aaPredicted RBP16.52■□□□□ 0.24
KRT40-202ENST00000398486 BCORQ6W2J9 1755 aa16.52■□□□□ 0.23
KRT40-202ENST00000398486 C4AP0C0L4 1744 aa16.51■□□□□ 0.23
KRT40-202ENST00000398486 TUBGCP6Q96RT7 1819 aa16.51■□□□□ 0.23
KRT40-202ENST00000398486 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
KRT40-202ENST00000398486 MVPQ14764 893 aaKnown RBP16.51■□□□□ 0.23
KRT40-202ENST00000398486 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
KRT40-202ENST00000398486 PROM2Q8N271 834 aa16.51■□□□□ 0.23
KRT40-202ENST00000398486 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
KRT40-202ENST00000398486 CCDC87Q9NVE4 849 aa16.51■□□□□ 0.23
KRT40-202ENST00000398486 AFDNP55196 1824 aaKnown RBP16.51■□□□□ 0.23
KRT40-202ENST00000398486 NUP98P52948 1817 aa16.5■□□□□ 0.23
KRT40-202ENST00000398486 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
KRT40-202ENST00000398486 TTLL7Q6ZT98 887 aa16.5■□□□□ 0.23
KRT40-202ENST00000398486 CNTNAP4Q9C0A0 1308 aa16.5■□□□□ 0.23
KRT40-202ENST00000398486 ANKRD36CQ5JPF3 1778 aa16.5■□□□□ 0.23
KRT40-202ENST00000398486 SCN7AQ01118 1682 aa16.49■□□□□ 0.23
KRT40-202ENST00000398486 PLSCR1O15162 318 aa16.49■□□□□ 0.23
KRT40-202ENST00000398486 INTS3Q68E01 1043 aaKnown RBP16.49■□□□□ 0.23
KRT40-202ENST00000398486 ATP10DQ9P241 1426 aa16.49■□□□□ 0.23
KRT40-202ENST00000398486 APBA3O96018 575 aa16.48■□□□□ 0.23
KRT40-202ENST00000398486 MS4A1P11836 297 aa16.48■□□□□ 0.23
KRT40-202ENST00000398486 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
KRT40-202ENST00000398486 AMIGO3Q86WK7 504 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms