RNA–Protein interactions for RNA: ENST00000398461.5

MEG3-202, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 3,452 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-202ENST00000398461 FMNL2Q96PY5 1086 aa15.93■□□□□ 0.14
MEG3-202ENST00000398461 HSP90AB1P08238 724 aaKnown RBP15.93■□□□□ 0.14
MEG3-202ENST00000398461 RIC3Q7Z5B4 369 aa15.93■□□□□ 0.14
MEG3-202ENST00000398461 DBF4Q9UBU7 674 aaPredicted RBP15.93■□□□□ 0.14
MEG3-202ENST00000398461 ABCC4O15439 1325 aa15.93■□□□□ 0.14
MEG3-202ENST00000398461 NBPF7P0C2Y1 421 aaPredicted RBP15.92■□□□□ 0.14
MEG3-202ENST00000398461 ZBTB3Q9H5J0 574 aa15.92■□□□□ 0.14
MEG3-202ENST00000398461 SPATA31A1Q5TZJ5 1347 aa15.92■□□□□ 0.14
MEG3-202ENST00000398461 MARCH10Q8NA82 808 aaPredicted RBP15.92■□□□□ 0.14
MEG3-202ENST00000398461 FAM208AQ9UK61 1670 aaKnown RBP15.92■□□□□ 0.14
MEG3-202ENST00000398461 UNC5CLQ8IV45 518 aa15.92■□□□□ 0.14
MEG3-202ENST00000398461 SMARCA5O60264 1052 aaPredicted RBP15.91■□□□□ 0.14
MEG3-202ENST00000398461 SNRPA1P09661 255 aaKnown RBP15.91■□□□□ 0.14
MEG3-202ENST00000398461 DNAJC10Q8IXB1 793 aa15.91■□□□□ 0.14
MEG3-202ENST00000398461 ARHGAP45Q92619 1136 aa15.91■□□□□ 0.14
MEG3-202ENST00000398461 COL16A1Q07092 1604 aaPredicted RBP15.9■□□□□ 0.14
MEG3-202ENST00000398461 EXOC6BQ9Y2D4 811 aa15.9■□□□□ 0.14
MEG3-202ENST00000398461 LRRFIP2Q9Y608 721 aaKnown RBP15.9■□□□□ 0.14
MEG3-202ENST00000398461 ABCA3Q99758 1704 aa15.9■□□□□ 0.14
MEG3-202ENST00000398461 FAM177BA6PVY3 158 aa15.89■□□□□ 0.13
MEG3-202ENST00000398461 NCAPD2Q15021 1401 aa15.89■□□□□ 0.13
MEG3-202ENST00000398461 TTLL7Q6ZT98 887 aa15.89■□□□□ 0.13
MEG3-202ENST00000398461 DNAAF4Q8WXU2 420 aa15.89■□□□□ 0.13
MEG3-202ENST00000398461 JCADQ9P266 1359 aa15.89■□□□□ 0.13
MEG3-202ENST00000398461 PTPRCP08575 1304 aa15.89■□□□□ 0.13
MEG3-202ENST00000398461 C16orf71Q8IYS4 520 aaPredicted RBP15.89■□□□□ 0.13
MEG3-202ENST00000398461 PDIA6Q15084 440 aa15.88■□□□□ 0.13
MEG3-202ENST00000398461 MYD88Q99836 296 aa15.88■□□□□ 0.13
MEG3-202ENST00000398461 C9orf78Q9NZ63 289 aaPredicted RBP15.88■□□□□ 0.13
MEG3-202ENST00000398461 RGS12O14924 1447 aa15.88■□□□□ 0.13
MEG3-202ENST00000398461 AFF2P51816 1311 aa15.88■□□□□ 0.13
MEG3-202ENST00000398461 LMO7Q8WWI1 1683 aa15.88■□□□□ 0.13
MEG3-202ENST00000398461 SRCIN1Q9C0H9 1055 aa15.88■□□□□ 0.13
MEG3-202ENST00000398461 ATG3Q9NT62 314 aa15.88■□□□□ 0.13
MEG3-202ENST00000398461 CCDC85AQ96PX6 553 aaPredicted RBP15.88■□□□□ 0.13
MEG3-202ENST00000398461 AHDC1Q5TGY3 1603 aaPredicted RBP15.87■□□□□ 0.13
MEG3-202ENST00000398461 PNMA6EA0A0J9YXQ4 647 aa15.87■□□□□ 0.13
MEG3-202ENST00000398461 NBPF26B4DH59 902 aa15.87■□□□□ 0.13
MEG3-202ENST00000398461 BRPF1P55201 1214 aaPredicted RBP15.87■□□□□ 0.13
MEG3-202ENST00000398461 NBPF14Q5TI25 921 aa15.87■□□□□ 0.13
MEG3-202ENST00000398461 TSHZ3Q63HK5 1081 aa15.87■□□□□ 0.13
MEG3-202ENST00000398461 INTS3Q68E01 1043 aaKnown RBP15.87■□□□□ 0.13
MEG3-202ENST00000398461 NBPF10Q6P3W6 841 aaKnown RBP15.87■□□□□ 0.13
MEG3-202ENST00000398461 NBPF15Q8N660 670 aa15.87■□□□□ 0.13
MEG3-202ENST00000398461 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
MEG3-202ENST00000398461 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
MEG3-202ENST00000398461 SPATA31A5Q5VU36 1347 aa15.87■□□□□ 0.13
MEG3-202ENST00000398461 SPATA31A7Q8IWB4 1347 aa15.87■□□□□ 0.13
MEG3-202ENST00000398461 ERVV-2B6SEH9 535 aa15.86■□□□□ 0.13
MEG3-202ENST00000398461 UBTFL1P0CB47 393 aaPredicted RBP15.86■□□□□ 0.13
MEG3-202ENST00000398461 DDX21Q9NR30 783 aaKnown RBP eCLIP15.86■□□□□ 0.13
MEG3-202ENST00000398461 PDE4AP27815 886 aa15.85■□□□□ 0.13
MEG3-202ENST00000398461 SLC4A9Q96Q91 983 aa15.85■□□□□ 0.13
MEG3-202ENST00000398461 TBC1D2BQ9UPU7 963 aa15.85■□□□□ 0.13
MEG3-202ENST00000398461 ANKRD13DQ6ZTN6 518 aa15.85■□□□□ 0.13
MEG3-202ENST00000398461 SPRYD3Q8NCJ5 442 aa15.85■□□□□ 0.13
MEG3-202ENST00000398461 OTUD7AQ8TE49 926 aaPredicted RBP15.85■□□□□ 0.13
MEG3-202ENST00000398461 CCT4P50991 539 aaKnown RBP15.84■□□□□ 0.13
MEG3-202ENST00000398461 KLHDC4Q8TBB5 520 aa15.84■□□□□ 0.13
MEG3-202ENST00000398461 BABAM1Q9NWV8 329 aa15.84■□□□□ 0.13
MEG3-202ENST00000398461 GPTP24298 496 aa15.84■□□□□ 0.13
MEG3-202ENST00000398461 CEP85Q6P2H3 762 aa15.84■□□□□ 0.13
MEG3-202ENST00000398461 LRP6O75581 1613 aa15.84■□□□□ 0.13
MEG3-202ENST00000398461 ADCY9O60503 1353 aa15.84■□□□□ 0.13
MEG3-202ENST00000398461 QTRT2Q9H974 415 aaKnown RBP15.84■□□□□ 0.13
MEG3-202ENST00000398461 CHMP3Q9Y3E7 222 aa15.84■□□□□ 0.13
MEG3-202ENST00000398461 GNAI2P04899 355 aa15.83■□□□□ 0.12
MEG3-202ENST00000398461 VSIG10Q8N0Z9 540 aa15.83■□□□□ 0.12
MEG3-202ENST00000398461 SIL1Q9H173 461 aa15.83■□□□□ 0.12
MEG3-202ENST00000398461 IL1RAPL2Q9NP60 686 aa15.83■□□□□ 0.12
MEG3-202ENST00000398461 HYPKQ9NX55 129 aa15.83■□□□□ 0.12
MEG3-202ENST00000398461 ATP6V1AP38606 617 aa15.82■□□□□ 0.12
MEG3-202ENST00000398461 BEND3Q5T5X7 828 aa15.82■□□□□ 0.12
MEG3-202ENST00000398461 KSR2Q6VAB6 950 aa15.82■□□□□ 0.12
MEG3-202ENST00000398461 BCL9LQ86UU0 1499 aa15.82■□□□□ 0.12
MEG3-202ENST00000398461 SRGAP3O43295 1099 aa15.82■□□□□ 0.12
MEG3-202ENST00000398461 PA2G4Q9UQ80 394 aaKnown RBP15.82■□□□□ 0.12
MEG3-202ENST00000398461 NKX1-1Q15270 411 aaPredicted RBP15.81■□□□□ 0.12
MEG3-202ENST00000398461 UBE3BQ7Z3V4 1068 aa15.81■□□□□ 0.12
MEG3-202ENST00000398461 ZBTB1Q9Y2K1 713 aa15.81■□□□□ 0.12
MEG3-202ENST00000398461 LRRC37A3O60309 1634 aa15.81■□□□□ 0.12
MEG3-202ENST00000398461 HEG1Q9ULI3 1381 aa15.81■□□□□ 0.12
MEG3-202ENST00000398461 NAP1L5Q96NT1 182 aaPredicted RBP15.81■□□□□ 0.12
MEG3-202ENST00000398461 ARID3AQ99856 593 aa15.81■□□□□ 0.12
MEG3-202ENST00000398461 IGKV5-2P06315 115 aa15.8■□□□□ 0.12
MEG3-202ENST00000398461 PPP1R42Q7Z4L9 355 aa15.8■□□□□ 0.12
MEG3-202ENST00000398461 SYNE4Q8N205 404 aa15.8■□□□□ 0.12
MEG3-202ENST00000398461 SCN11AQ9UI33 1791 aa15.8■□□□□ 0.12
MEG3-202ENST00000398461 DDX58O95786 925 aaKnown RBP15.8■□□□□ 0.12
MEG3-202ENST00000398461 GJD4Q96KN9 370 aaPredicted RBP15.8■□□□□ 0.12
MEG3-202ENST00000398461 SEC24BO95487 1268 aa15.79■□□□□ 0.12
MEG3-202ENST00000398461 NEXNQ0ZGT2 675 aa15.79■□□□□ 0.12
MEG3-202ENST00000398461 COL14A1Q05707 1796 aaKnown RBP15.79■□□□□ 0.12
MEG3-202ENST00000398461 HOXB7P09629 217 aa15.79■□□□□ 0.12
MEG3-202ENST00000398461 HDAC1Q13547 482 aaPredicted RBP15.79■□□□□ 0.12
MEG3-202ENST00000398461 CHD1LQ86WJ1 897 aa15.79■□□□□ 0.12
MEG3-202ENST00000398461 GZF1Q9H116 711 aaPredicted RBP15.79■□□□□ 0.12
MEG3-202ENST00000398461 SURF6O75683 361 aaKnown RBP15.78■□□□□ 0.12
MEG3-202ENST00000398461 GSE1Q14687 1217 aa15.78■□□□□ 0.12
MEG3-202ENST00000398461 SEPT12Q8IYM1 358 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms