RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 MTX1Q13505 466 aa9.18□□□□□ -0.94
RGPD1-201ENST00000398193 THRAP3Q9Y2W1 955 aaKnown RBP9.18□□□□□ -0.94
RGPD1-201ENST00000398193 MSH5O43196 834 aa9.18□□□□□ -0.94
RGPD1-201ENST00000398193 POLA2Q14181 598 aa9.18□□□□□ -0.94
RGPD1-201ENST00000398193 BEND3Q5T5X7 828 aa9.18□□□□□ -0.94
RGPD1-201ENST00000398193 FMNL2Q96PY5 1086 aa9.18□□□□□ -0.94
RGPD1-201ENST00000398193 EPB41L2O43491 1005 aaKnown RBP9.18□□□□□ -0.94
RGPD1-201ENST00000398193 SNRPA1P09661 255 aaKnown RBP9.18□□□□□ -0.94
RGPD1-201ENST00000398193 BECN1Q14457 450 aa9.18□□□□□ -0.94
RGPD1-201ENST00000398193 ADCY9O60503 1353 aa9.18□□□□□ -0.94
RGPD1-201ENST00000398193 TBC1D32Q96NH3 1257 aa9.18□□□□□ -0.94
RGPD1-201ENST00000398193 ANKRD45Q5TZF3 282 aa9.18□□□□□ -0.94
RGPD1-201ENST00000398193 DDX17Q92841 729 aaKnown RBP9.17□□□□□ -0.94
RGPD1-201ENST00000398193 RREB1Q92766 1687 aa9.17□□□□□ -0.94
RGPD1-201ENST00000398193 UBTFL1P0CB47 393 aaPredicted RBP9.17□□□□□ -0.94
RGPD1-201ENST00000398193 TTC5Q8N0Z6 440 aa9.17□□□□□ -0.94
RGPD1-201ENST00000398193 MEIS3Q99687 375 aa9.17□□□□□ -0.94
RGPD1-201ENST00000398193 CHPF2Q9P2E5 772 aa9.17□□□□□ -0.94
RGPD1-201ENST00000398193 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.17□□□□□ -0.94
RGPD1-201ENST00000398193 CABP4P57796 275 aa9.17□□□□□ -0.94
RGPD1-201ENST00000398193 CDC45O75419 566 aa9.16□□□□□ -0.94
RGPD1-201ENST00000398193 CASC1Q6TDU7 716 aa9.16□□□□□ -0.94
RGPD1-201ENST00000398193 SSH3Q8TE77 659 aa9.16□□□□□ -0.94
RGPD1-201ENST00000398193 TEX13AQ9BXU3 409 aaPredicted RBP9.16□□□□□ -0.94
RGPD1-201ENST00000398193 TTC22Q5TAA0 569 aa9.16□□□□□ -0.94
RGPD1-201ENST00000398193 CYP27B1O15528 508 aa9.16□□□□□ -0.94
RGPD1-201ENST00000398193 ERC1Q8IUD2 1116 aa9.16□□□□□ -0.94
RGPD1-201ENST00000398193 USP42Q9H9J4 1324 aaKnown RBP9.16□□□□□ -0.94
RGPD1-201ENST00000398193 LARP1Q6PKG0 1096 aaKnown RBP9.16□□□□□ -0.94
RGPD1-201ENST00000398193 TOM1L2Q6ZVM7 507 aa9.16□□□□□ -0.94
RGPD1-201ENST00000398193 VSIG10Q8N0Z9 540 aa9.16□□□□□ -0.94
RGPD1-201ENST00000398193 RBM25P49756 843 aaKnown RBP9.15□□□□□ -0.94
RGPD1-201ENST00000398193 PLEKHM2Q8IWE5 1019 aa9.15□□□□□ -0.94
RGPD1-201ENST00000398193 STAP2Q9UGK3 403 aa9.15□□□□□ -0.94
RGPD1-201ENST00000398193 C1orf115Q9H7X2 142 aa9.15□□□□□ -0.94
RGPD1-201ENST00000398193 PDIA6Q15084 440 aa9.15□□□□□ -0.95
RGPD1-201ENST00000398193 LINS1Q8NG48 757 aa9.15□□□□□ -0.95
RGPD1-201ENST00000398193 CABLES1Q8TDN4 633 aa9.15□□□□□ -0.95
RGPD1-201ENST00000398193 LRRCC1Q9C099 1032 aa9.14□□□□□ -0.95
RGPD1-201ENST00000398193 USP44Q9H0E7 712 aa9.14□□□□□ -0.95
RGPD1-201ENST00000398193 SLC4A10Q6U841 1118 aa9.14□□□□□ -0.95
RGPD1-201ENST00000398193 EVA1CP58658 441 aa9.14□□□□□ -0.95
RGPD1-201ENST00000398193 SALL3Q9BXA9 1300 aa9.14□□□□□ -0.95
RGPD1-201ENST00000398193 CHRNA2Q15822 529 aa9.14□□□□□ -0.95
RGPD1-201ENST00000398193 AFDNP55196 1824 aaKnown RBP9.14□□□□□ -0.95
RGPD1-201ENST00000398193 KCNQ3O43525 872 aa9.14□□□□□ -0.95
RGPD1-201ENST00000398193 TICAM2Q86XR7 235 aa9.14□□□□□ -0.95
RGPD1-201ENST00000398193 LNPKQ9C0E8 428 aa9.14□□□□□ -0.95
RGPD1-201ENST00000398193 DAXXQ9UER7 740 aaPredicted RBP9.14□□□□□ -0.95
RGPD1-201ENST00000398193 F6X3S4 739 aa9.13□□□□□ -0.95
RGPD1-201ENST00000398193 METTL22Q9BUU2 404 aaPredicted RBP9.13□□□□□ -0.95
RGPD1-201ENST00000398193 PHAXQ9H814 394 aaKnown RBP9.13□□□□□ -0.95
RGPD1-201ENST00000398193 ITGB4P16144 1822 aa9.13□□□□□ -0.95
RGPD1-201ENST00000398193 EIF2S2P20042 333 aaKnown RBP9.13□□□□□ -0.95
RGPD1-201ENST00000398193 SKAP1Q86WV1 359 aa9.13□□□□□ -0.95
RGPD1-201ENST00000398193 USP35Q9P2H5 1018 aa9.13□□□□□ -0.95
RGPD1-201ENST00000398193 TJP1Q07157 1748 aa9.13□□□□□ -0.95
RGPD1-201ENST00000398193 LRP10Q7Z4F1 713 aa9.13□□□□□ -0.95
RGPD1-201ENST00000398193 SNX21Q969T3 373 aa9.13□□□□□ -0.95
RGPD1-201ENST00000398193 MAP3K2Q9Y2U5 619 aa9.13□□□□□ -0.95
RGPD1-201ENST00000398193 NEXNQ0ZGT2 675 aa9.12□□□□□ -0.95
RGPD1-201ENST00000398193 SLIT2O94813 1529 aa9.12□□□□□ -0.95
RGPD1-201ENST00000398193 NFATC2IPQ8NCF5 419 aa9.12□□□□□ -0.95
RGPD1-201ENST00000398193 PLBD2Q8NHP8 589 aa9.12□□□□□ -0.95
RGPD1-201ENST00000398193 PI4KAP2A4QPH2 592 aa9.12□□□□□ -0.95
RGPD1-201ENST00000398193 PI4KAP1Q8N8J0 262 aa9.12□□□□□ -0.95
RGPD1-201ENST00000398193 LRRFIP2Q9Y608 721 aaKnown RBP9.12□□□□□ -0.95
RGPD1-201ENST00000398193 TTC41PQ6P2S7 1318 aa9.12□□□□□ -0.95
RGPD1-201ENST00000398193 IL17RAQ96F46 866 aa9.11□□□□□ -0.95
RGPD1-201ENST00000398193 C22orf23Q9BZE7 217 aa9.11□□□□□ -0.95
RGPD1-201ENST00000398193 KIF1BPQ96EK5 621 aa9.11□□□□□ -0.95
RGPD1-201ENST00000398193 ANKRD36CQ5JPF3 1778 aa9.11□□□□□ -0.95
RGPD1-201ENST00000398193 BARGINQ6ZT62 677 aa9.11□□□□□ -0.95
RGPD1-201ENST00000398193 NPM2Q86SE8 214 aaKnown RBP9.1□□□□□ -0.95
RGPD1-201ENST00000398193 DOT1LQ8TEK3 1739 aa9.1□□□□□ -0.95
RGPD1-201ENST00000398193 GRM8O00222 908 aa9.1□□□□□ -0.95
RGPD1-201ENST00000398193 TOM1O60784 492 aa9.1□□□□□ -0.95
RGPD1-201ENST00000398193 RGL2O15211 777 aa9.1□□□□□ -0.95
RGPD1-201ENST00000398193 ZNF496Q96IT1 587 aaPredicted RBP9.1□□□□□ -0.95
RGPD1-201ENST00000398193 BCL9O00512 1426 aa9.09□□□□□ -0.95
RGPD1-201ENST00000398193 PDE1AP54750 535 aa9.09□□□□□ -0.95
RGPD1-201ENST00000398193 RFX7Q2KHR2 1363 aa9.09□□□□□ -0.95
RGPD1-201ENST00000398193 GSPT1P15170 499 aaKnown RBP9.09□□□□□ -0.95
RGPD1-201ENST00000398193 GPATCH3Q96I76 525 aa9.09□□□□□ -0.95
RGPD1-201ENST00000398193 TMOD3Q9NYL9 352 aa9.09□□□□□ -0.95
RGPD1-201ENST00000398193 NEURL1BA8MQ27 555 aa9.09□□□□□ -0.95
RGPD1-201ENST00000398193 MX1P20591 662 aa9.09□□□□□ -0.95
RGPD1-201ENST00000398193 TBC1D9Q6ZT07 1266 aa9.09□□□□□ -0.95
RGPD1-201ENST00000398193 RIC3Q7Z5B4 369 aa9.09□□□□□ -0.95
RGPD1-201ENST00000398193 C9orf78Q9NZ63 289 aaPredicted RBP9.09□□□□□ -0.95
RGPD1-201ENST00000398193 REC8O95072 547 aa9.08□□□□□ -0.96
RGPD1-201ENST00000398193 PPP1R42Q7Z4L9 355 aa9.08□□□□□ -0.96
RGPD1-201ENST00000398193 SPATA31A1Q5TZJ5 1347 aa9.08□□□□□ -0.96
RGPD1-201ENST00000398193 ANKRD13DQ6ZTN6 518 aa9.08□□□□□ -0.96
RGPD1-201ENST00000398193 THSD7AQ9UPZ6 1657 aa9.08□□□□□ -0.96
RGPD1-201ENST00000398193 NECTIN2Q92692 538 aa9.08□□□□□ -0.96
RGPD1-201ENST00000398193 BTG4Q9NY30 223 aa9.08□□□□□ -0.96
RGPD1-201ENST00000398193 RABL6Q3YEC7 729 aaPredicted RBP9.08□□□□□ -0.96
RGPD1-201ENST00000398193 ATG3Q9NT62 314 aa9.08□□□□□ -0.96
RGPD1-201ENST00000398193 PNMA6EA0A0J9YXQ4 647 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms