RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 CLTCL1P53675 1640 aa13.19□□□□□ -0.3
CSGALNACT1-202ENST00000397998 MYOM2P54296 1465 aa13.19□□□□□ -0.3
CSGALNACT1-202ENST00000397998 NLRP1Q9C000 1473 aa13.19□□□□□ -0.3
CSGALNACT1-202ENST00000397998 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
CSGALNACT1-202ENST00000397998 CHL1O00533 1208 aa13.19□□□□□ -0.3
CSGALNACT1-202ENST00000397998 MTHFSDQ2M296 383 aaKnown RBP13.19□□□□□ -0.3
CSGALNACT1-202ENST00000397998 SH2B1Q9NRF2 756 aaPredicted RBP13.19□□□□□ -0.3
CSGALNACT1-202ENST00000397998 CCDC186Q7Z3E2 898 aa13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 NEUROD6Q96NK8 337 aa13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 CCDC8Q9H0W5 538 aaPredicted RBP13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 IBTKQ9P2D0 1353 aaPredicted RBP13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 YTHDC2Q9H6S0 1430 aaKnown RBP13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ABCC1P33527 1531 aa13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 KDM4AO75164 1064 aa13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 CSB-PGBD3P0DP91 1061 aa13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 CCDC94Q9BW85 323 aaPredicted RBP13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 RTL1A6NKG5 1358 aa13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 LAMC1P11047 1609 aa13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 BRPF1P55201 1214 aaPredicted RBP13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ASXL2Q76L83 1435 aa13.18□□□□□ -0.3
CSGALNACT1-202ENST00000397998 HIP1O00291 1037 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 SMC2O95347 1197 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ANKRD1Q15327 319 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ERC1Q8IUD2 1116 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ME1P48163 572 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ACEP12821 1306 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 PI4KAP2A4QPH2 592 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ZNF165P49910 485 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 PI4KAP1Q8N8J0 262 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 PIBF1Q8WXW3 757 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 CDC42BPBQ9Y5S2 1711 aa13.17□□□□□ -0.3
CSGALNACT1-202ENST00000397998 TRMT1Q9NXH9 659 aaKnown RBP13.16□□□□□ -0.3
CSGALNACT1-202ENST00000397998 CPLX1O14810 134 aa13.16□□□□□ -0.3
CSGALNACT1-202ENST00000397998 FAM173BQ6P4H8 233 aa13.16□□□□□ -0.3
CSGALNACT1-202ENST00000397998 MYRIPQ8NFW9 859 aa13.16□□□□□ -0.3
CSGALNACT1-202ENST00000397998 DNAAF4Q8WXU2 420 aa13.16□□□□□ -0.3
CSGALNACT1-202ENST00000397998 PPFIA3O75145 1194 aa13.16□□□□□ -0.3
CSGALNACT1-202ENST00000397998 PTGS1P23219 599 aa13.16□□□□□ -0.3
CSGALNACT1-202ENST00000397998 DACT1Q9NYF0 836 aa13.16□□□□□ -0.3
CSGALNACT1-202ENST00000397998 DDIT3P35638 169 aa13.15□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ECHDC1Q9NTX5 307 aa13.15□□□□□ -0.3
CSGALNACT1-202ENST00000397998 PLXNC1O60486 1568 aa13.15□□□□□ -0.3
CSGALNACT1-202ENST00000397998 TTC21BQ7Z4L5 1316 aa13.15□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ZNF530Q6P9A1 599 aaPredicted RBP13.15□□□□□ -0.3
CSGALNACT1-202ENST00000397998 MNS1Q8NEH6 495 aa13.15□□□□□ -0.3
CSGALNACT1-202ENST00000397998 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
CSGALNACT1-202ENST00000397998 ANO6Q4KMQ2 910 aa13.14□□□□□ -0.31
CSGALNACT1-202ENST00000397998 LUZP1Q86V48 1076 aa13.14□□□□□ -0.31
CSGALNACT1-202ENST00000397998 NAT10Q9H0A0 1025 aaKnown RBP13.14□□□□□ -0.31
CSGALNACT1-202ENST00000397998 ZDHHC9Q9Y397 364 aa13.14□□□□□ -0.31
CSGALNACT1-202ENST00000397998 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
CSGALNACT1-202ENST00000397998 ZNF853P0CG23 659 aa13.14□□□□□ -0.31
CSGALNACT1-202ENST00000397998 PTPN14Q15678 1187 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 TAF7LQ5H9L4 462 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 SYNE3Q6ZMZ3 975 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 CREBRFQ8IUR6 639 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 PODXL2Q9NZ53 605 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 UNC5CLQ8IV45 518 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 PHAXQ9H814 394 aaKnown RBP13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 CFAP45Q9UL16 551 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 SNX14Q9Y5W7 946 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 PSME1Q06323 249 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 GUCY1B3Q02153 619 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 TYRO3Q06418 890 aa13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 SMAP1Q8IYB5 467 aaPredicted RBP13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 DDX19AQ9NUU7 478 aaKnown RBP13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 RBM8AQ9Y5S9 174 aaKnown RBP13.13□□□□□ -0.31
CSGALNACT1-202ENST00000397998 STK38Q15208 465 aa13.12□□□□□ -0.31
CSGALNACT1-202ENST00000397998 PA2G4Q9UQ80 394 aaKnown RBP13.12□□□□□ -0.31
CSGALNACT1-202ENST00000397998 ERICH4A6NGS2 130 aa13.12□□□□□ -0.31
CSGALNACT1-202ENST00000397998 RIOK3O14730 519 aaKnown RBP13.12□□□□□ -0.31
CSGALNACT1-202ENST00000397998 MYL6BP14649 208 aa13.12□□□□□ -0.31
CSGALNACT1-202ENST00000397998 CLEC17AQ6ZS10 378 aa13.12□□□□□ -0.31
CSGALNACT1-202ENST00000397998 DNAJC25Q9H1X3 360 aa13.12□□□□□ -0.31
CSGALNACT1-202ENST00000397998 PDLIM2Q96JY6 352 aa13.12□□□□□ -0.31
CSGALNACT1-202ENST00000397998 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
CSGALNACT1-202ENST00000397998 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.12□□□□□ -0.31
CSGALNACT1-202ENST00000397998 V9GYY5 206 aaPredicted RBP13.12□□□□□ -0.31
CSGALNACT1-202ENST00000397998 FAM177A1Q8N128 213 aaPredicted RBP13.11□□□□□ -0.31
CSGALNACT1-202ENST00000397998 SGSM2O43147 1006 aa13.11□□□□□ -0.31
CSGALNACT1-202ENST00000397998 CEP57L1Q8IYX8 460 aa13.11□□□□□ -0.31
CSGALNACT1-202ENST00000397998 EVI5LQ96CN4 794 aa13.11□□□□□ -0.31
CSGALNACT1-202ENST00000397998 ZNF396Q96N95 335 aaPredicted RBP13.11□□□□□ -0.31
CSGALNACT1-202ENST00000397998 PIK3R4Q99570 1358 aa13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 IQSEC2Q5JU85 1478 aa13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 HSPA4P34932 840 aa13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 CHPF2Q9P2E5 772 aa13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 CGNQ9P2M7 1197 aaKnown RBP13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 U2AF2P26368 475 aaKnown RBP eCLIP13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 WASHC4Q2M389 1173 aa13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 PLEKHO1Q53GL0 409 aaPredicted RBP13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 MPRIPQ6WCQ1 1025 aa13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 TTC5Q8N0Z6 440 aa13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 JARID2Q92833 1246 aaPredicted RBP13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 EYA1Q99502 592 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms