RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 SLC20A2Q08357 652 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 CCDC97Q96F63 343 aaPredicted RBP10.5□□□□□ -0.73
TRPM1-202ENST00000397795 CDK5RAP3Q96JB5 506 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 STMN4Q9H169 189 aaPredicted RBP10.5□□□□□ -0.73
TRPM1-202ENST00000397795 ARFGAP3Q9NP61 516 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 RNF8O76064 485 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 GSDMDP57764 484 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 AIMP1Q12904 312 aaKnown RBP10.5□□□□□ -0.73
TRPM1-202ENST00000397795 HOOK3Q86VS8 718 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 CCDC144AA2RUR9 1427 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 PRXQ9BXM0 1461 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 DHX16O60231 1041 aaKnown RBP10.5□□□□□ -0.73
TRPM1-202ENST00000397795 KDM4AO75164 1064 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 FOSBP53539 338 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 MAP3K9P80192 1104 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 CCDC38Q502W7 563 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 RGS22Q8NE09 1264 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 RAB3IL1Q8TBN0 382 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 CTDP1Q9Y5B0 961 aaPredicted RBP10.5□□□□□ -0.73
TRPM1-202ENST00000397795 GBP1P32455 592 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 MAP3K11Q16584 847 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 AEBP2Q6ZN18 517 aaPredicted RBP10.49□□□□□ -0.73
TRPM1-202ENST00000397795 HDGFL2Q7Z4V5 671 aaPredicted RBP10.49□□□□□ -0.73
TRPM1-202ENST00000397795 CNPY4Q8N129 248 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 LMBRD1Q9NUN5 540 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 GEMIN8Q9NWZ8 242 aaKnown RBP10.49□□□□□ -0.73
TRPM1-202ENST00000397795 ERC2O15083 957 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 BUB1BO60566 1050 aaPredicted RBP10.49□□□□□ -0.73
TRPM1-202ENST00000397795 IFIT2P09913 472 aaKnown RBP10.49□□□□□ -0.73
TRPM1-202ENST00000397795 TPD52P55327 224 aaPredicted RBP10.49□□□□□ -0.73
TRPM1-202ENST00000397795 SERPINA10Q9UK55 444 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 CUX1P39880 1505 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 RALYLQ86SE5 291 aaKnown RBP10.49□□□□□ -0.73
TRPM1-202ENST00000397795 ATRIPQ8WXE1 791 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 HOMER2Q9NSB8 354 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 MAP4K4O95819 1239 aaPredicted RBP10.49□□□□□ -0.73
TRPM1-202ENST00000397795 TANGO6Q9C0B7 1094 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 RAI14Q9P0K7 980 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 B4GALNT4Q76KP1 1039 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 CCDC155Q8N6L0 562 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 CLIP2Q9UDT6 1046 aa10.49□□□□□ -0.73
TRPM1-202ENST00000397795 USO1O60763 962 aaKnown RBP10.48□□□□□ -0.73
TRPM1-202ENST00000397795 PPFIA2O75334 1257 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 TUBB4AP04350 444 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 RARSP54136 660 aaKnown RBP10.48□□□□□ -0.73
TRPM1-202ENST00000397795 TUBB4BP68371 445 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 NUTM1Q86Y26 1132 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 C17orf53Q8N3J3 647 aaPredicted RBP10.48□□□□□ -0.73
TRPM1-202ENST00000397795 GTF3C6Q969F1 213 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 IFT74Q96LB3 600 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 PCDHB15Q9Y5E8 787 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 USP19O94966 1318 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 ZSCAN26Q16670 478 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 PFDN1O60925 122 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 GMNNO75496 209 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 CCDC178Q5BJE1 867 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 CCDC186Q7Z3E2 898 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 SREK1Q8WXA9 508 aaKnown RBP10.48□□□□□ -0.73
TRPM1-202ENST00000397795 STMN2Q93045 179 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 CTAGE6Q86UF2 777 aa10.48□□□□□ -0.73
TRPM1-202ENST00000397795 ANAPC15P60006 121 aa10.47□□□□□ -0.73
TRPM1-202ENST00000397795 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
TRPM1-202ENST00000397795 G3V3G9 751 aa10.47□□□□□ -0.73
TRPM1-202ENST00000397795 MX1P20591 662 aa10.47□□□□□ -0.73
TRPM1-202ENST00000397795 EIF5P55010 431 aaKnown RBP10.47□□□□□ -0.73
TRPM1-202ENST00000397795 CKAP4Q07065 602 aaKnown RBP10.47□□□□□ -0.73
TRPM1-202ENST00000397795 CFAP100Q494V2 611 aa10.47□□□□□ -0.73
TRPM1-202ENST00000397795 DCAF8Q5TAQ9 597 aa10.47□□□□□ -0.73
TRPM1-202ENST00000397795 NCAPGQ9BPX3 1015 aa10.47□□□□□ -0.73
TRPM1-202ENST00000397795 DNAI2Q9GZS0 605 aa10.47□□□□□ -0.73
TRPM1-202ENST00000397795 JRKLQ9Y4A0 524 aa10.47□□□□□ -0.73
TRPM1-202ENST00000397795 DIAPH1O60610 1272 aaKnown RBP10.47□□□□□ -0.73
TRPM1-202ENST00000397795 SNW1Q13573 536 aaKnown RBP10.47□□□□□ -0.73
TRPM1-202ENST00000397795 HLTFQ14527 1009 aaKnown RBP eCLIP10.47□□□□□ -0.73
TRPM1-202ENST00000397795 HNRNPH2P55795 449 aaKnown RBP10.47□□□□□ -0.73
TRPM1-202ENST00000397795 ALS2CR12Q96Q35 445 aa10.47□□□□□ -0.73
TRPM1-202ENST00000397795 INSRP06213 1382 aa10.46□□□□□ -0.73
TRPM1-202ENST00000397795 MGEA5O60502 916 aa10.46□□□□□ -0.73
TRPM1-202ENST00000397795 CCDC40Q4G0X9 1142 aa10.46□□□□□ -0.73
TRPM1-202ENST00000397795 PRR16Q569H4 304 aa10.46□□□□□ -0.73
TRPM1-202ENST00000397795 ATF7IPQ6VMQ6 1270 aa10.46□□□□□ -0.73
TRPM1-202ENST00000397795 RUFY3Q7L099 469 aa10.46□□□□□ -0.73
TRPM1-202ENST00000397795 SRRTQ9BXP5 876 aaKnown RBP10.46□□□□□ -0.73
TRPM1-202ENST00000397795 SCAPERQ9BY12 1400 aa10.46□□□□□ -0.73
TRPM1-202ENST00000397795 FLIIQ13045 1269 aa10.46□□□□□ -0.73
TRPM1-202ENST00000397795 HDAC1Q13547 482 aaPredicted RBP10.46□□□□□ -0.73
TRPM1-202ENST00000397795 ARFGAP2Q8N6H7 521 aa10.46□□□□□ -0.73
TRPM1-202ENST00000397795 CIB2O75838 187 aa10.46□□□□□ -0.74
TRPM1-202ENST00000397795 UBE2HP62256 183 aa10.46□□□□□ -0.74
TRPM1-202ENST00000397795 KRT18P05783 430 aaKnown RBP10.46□□□□□ -0.74
TRPM1-202ENST00000397795 CCDC92Q53HC0 331 aaPredicted RBP10.46□□□□□ -0.74
TRPM1-202ENST00000397795 WWC2Q6AWC2 1192 aa10.46□□□□□ -0.74
TRPM1-202ENST00000397795 RLBP1P12271 317 aa10.45□□□□□ -0.74
TRPM1-202ENST00000397795 PRPF31Q8WWY3 499 aaKnown RBP10.45□□□□□ -0.74
TRPM1-202ENST00000397795 TRIM7Q9C029 511 aa10.45□□□□□ -0.74
TRPM1-202ENST00000397795 LOC102724159A0A0B4J2E5 919 aa10.45□□□□□ -0.74
TRPM1-202ENST00000397795 SLMAPQ14BN4 828 aa10.45□□□□□ -0.74
TRPM1-202ENST00000397795 PWP2Q15269 919 aaKnown RBP10.45□□□□□ -0.74
TRPM1-202ENST00000397795 TBC1D9Q6ZT07 1266 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms