RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 EID1Q9Y6B2 187 aa8.78□□□□□ -1
SMCO1-201ENST00000397537 TARBP1Q13395 1621 aaKnown RBP8.78□□□□□ -1
SMCO1-201ENST00000397537 IRX5P78411 483 aaPredicted RBP8.77□□□□□ -1
SMCO1-201ENST00000397537 DHX8Q14562 1220 aaKnown RBP8.77□□□□□ -1
SMCO1-201ENST00000397537 CERKQ8TCT0 537 aa8.77□□□□□ -1
SMCO1-201ENST00000397537 ATF4P18848 351 aaPredicted RBP8.77□□□□□ -1.01
SMCO1-201ENST00000397537 VPS37DQ86XT2 251 aa8.77□□□□□ -1.01
SMCO1-201ENST00000397537 PRPF38AQ8NAV1 312 aaKnown RBP8.77□□□□□ -1.01
SMCO1-201ENST00000397537 CHMP7Q8WUX9 453 aaPredicted RBP8.77□□□□□ -1.01
SMCO1-201ENST00000397537 TMEM121BQ9BXQ6 578 aaPredicted RBP8.77□□□□□ -1.01
SMCO1-201ENST00000397537 OCEL1Q9H607 264 aa8.77□□□□□ -1.01
SMCO1-201ENST00000397537 SRA1Q9HD15 236 aaKnown RBP8.77□□□□□ -1.01
SMCO1-201ENST00000397537 SFMBT1Q9UHJ3 866 aa8.77□□□□□ -1.01
SMCO1-201ENST00000397537 KIAA1024Q9UPX6 916 aa8.77□□□□□ -1.01
SMCO1-201ENST00000397537 PER1O15534 1290 aaPredicted RBP8.76□□□□□ -1.01
SMCO1-201ENST00000397537 GNALP38405 381 aa8.76□□□□□ -1.01
SMCO1-201ENST00000397537 WDR78Q5VTH9 848 aa8.76□□□□□ -1.01
SMCO1-201ENST00000397537 CCSAPQ6IQ19 270 aaPredicted RBP8.76□□□□□ -1.01
SMCO1-201ENST00000397537 FERMT3Q86UX7 667 aa8.76□□□□□ -1.01
SMCO1-201ENST00000397537 ZNF512BQ96KM6 892 aaPredicted RBP8.76□□□□□ -1.01
SMCO1-201ENST00000397537 LGR5O75473 907 aa8.75□□□□□ -1.01
SMCO1-201ENST00000397537 ITGAEP38570 1179 aa8.75□□□□□ -1.01
SMCO1-201ENST00000397537 IER5LQ5T953 404 aa8.75□□□□□ -1.01
SMCO1-201ENST00000397537 TYW1BQ6NUM6 668 aa8.75□□□□□ -1.01
SMCO1-201ENST00000397537 CKAP2LQ8IYA6 745 aa8.75□□□□□ -1.01
SMCO1-201ENST00000397537 MKL1Q969V6 931 aa8.75□□□□□ -1.01
SMCO1-201ENST00000397537 C12orf49Q9H741 205 aa8.75□□□□□ -1.01
SMCO1-201ENST00000397537 DNAAF2Q9NVR5 837 aaKnown RBP8.75□□□□□ -1.01
SMCO1-201ENST00000397537 LDHAP00338 332 aaKnown RBP8.75□□□□□ -1.01
SMCO1-201ENST00000397537 PDE6BP35913 854 aa8.75□□□□□ -1.01
SMCO1-201ENST00000397537 EHHADHQ08426 723 aa8.75□□□□□ -1.01
SMCO1-201ENST00000397537 LCE2DQ5TA82 110 aaPredicted RBP8.75□□□□□ -1.01
SMCO1-201ENST00000397537 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
SMCO1-201ENST00000397537 KANSL2Q9H9L4 492 aa8.75□□□□□ -1.01
SMCO1-201ENST00000397537 ABCC10Q5T3U5 1492 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 ZBBXA8MT70 800 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 PLCG2P16885 1265 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 LMOD3Q0VAK6 560 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 MYBPC2Q14324 1141 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 NBPF6Q5VWK0 638 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 USP48Q86UV5 1035 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 NBPF4Q96M43 638 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 EYA1Q99502 592 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 PRKD2Q9BZL6 878 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 CYLDQ9NQC7 956 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 SWAP70Q9UH65 585 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 SNAPC4Q5SXM2 1469 aa8.74□□□□□ -1.01
SMCO1-201ENST00000397537 IGHA2P01877 340 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 LIG1P18858 919 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 GJA8P48165 433 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 PLCB3Q01970 1234 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 SRPK1Q96SB4 655 aaKnown RBP8.73□□□□□ -1.01
SMCO1-201ENST00000397537 MPHOSPH6Q99547 160 aaKnown RBP8.73□□□□□ -1.01
SMCO1-201ENST00000397537 TMX4Q9H1E5 349 aaPredicted RBP8.73□□□□□ -1.01
SMCO1-201ENST00000397537 MAP3K20Q9NYL2 800 aaKnown RBP8.73□□□□□ -1.01
SMCO1-201ENST00000397537 CFAP69A5D8W1 941 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 CTSHP09668 335 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 USP46P62068 366 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 SIX5Q8N196 739 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 PHTF2Q8N3S3 785 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 PTCD2Q8WV60 388 aaKnown RBP8.73□□□□□ -1.01
SMCO1-201ENST00000397537 APBA2Q99767 749 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 FANCLQ9NW38 375 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 NRBP1Q9UHY1 535 aa8.73□□□□□ -1.01
SMCO1-201ENST00000397537 ABCC8Q09428 1581 aa8.72□□□□□ -1.01
SMCO1-201ENST00000397537 ZBTB7BO15156 539 aaPredicted RBP8.72□□□□□ -1.01
SMCO1-201ENST00000397537 ZNF500O60304 480 aaPredicted RBP8.72□□□□□ -1.01
SMCO1-201ENST00000397537 CDC45O75419 566 aa8.72□□□□□ -1.01
SMCO1-201ENST00000397537 NPR3P17342 541 aa8.72□□□□□ -1.01
SMCO1-201ENST00000397537 PRSS12P56730 875 aa8.72□□□□□ -1.01
SMCO1-201ENST00000397537 SAFB2Q14151 953 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMCO1-201ENST00000397537 TMEM92Q6UXU6 159 aa8.72□□□□□ -1.01
SMCO1-201ENST00000397537 WDR75Q8IWA0 830 aaKnown RBP8.72□□□□□ -1.01
SMCO1-201ENST00000397537 RELTQ969Z4 430 aa8.72□□□□□ -1.01
SMCO1-201ENST00000397537 FAM163AQ96GL9 167 aaPredicted RBP8.72□□□□□ -1.01
SMCO1-201ENST00000397537 SLKQ9H2G2 1235 aaPredicted RBP8.72□□□□□ -1.01
SMCO1-201ENST00000397537 CHST12Q9NRB3 414 aa8.72□□□□□ -1.01
SMCO1-201ENST00000397537 BOLA1Q9Y3E2 137 aa8.72□□□□□ -1.01
SMCO1-201ENST00000397537 G3V3G9 751 aa8.71□□□□□ -1.01
SMCO1-201ENST00000397537 RGS20O76081 388 aa8.71□□□□□ -1.01
SMCO1-201ENST00000397537 SEC24BO95487 1268 aa8.71□□□□□ -1.01
SMCO1-201ENST00000397537 PGBD3Q8N328 593 aa8.71□□□□□ -1.01
SMCO1-201ENST00000397537 PURBQ96QR8 312 aaKnown RBP8.71□□□□□ -1.01
SMCO1-201ENST00000397537 JADE2Q9NQC1 790 aa8.71□□□□□ -1.01
SMCO1-201ENST00000397537 CEP126Q9P2H0 1117 aa8.71□□□□□ -1.01
SMCO1-201ENST00000397537 SEC13P55735 322 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 C6orf132Q5T0Z8 1188 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 CACTIN-AS1Q8N1I8 211 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 HELQQ8TDG4 1101 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 CCDC85AQ96PX6 553 aaPredicted RBP8.7□□□□□ -1.02
SMCO1-201ENST00000397537 NDUFB5O43674 189 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 FGAP02671 866 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 FKBP5Q13451 457 aaPredicted RBP8.7□□□□□ -1.02
SMCO1-201ENST00000397537 EML3Q32P44 896 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 SYCP2LQ5T4T6 812 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 TTC39BQ5VTQ0 682 aaPredicted RBP8.7□□□□□ -1.02
SMCO1-201ENST00000397537 TMC1Q8TDI8 760 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 HOMER2Q9NSB8 354 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 FAM198AQ9UFP1 575 aa8.7□□□□□ -1.02
SMCO1-201ENST00000397537 COLQQ9Y215 455 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms