RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 GNAI2P04899 355 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 HOXD11P31277 338 aaPredicted RBP6.08□□□□□ -1.44
SSR1-202ENST00000397511 DDX54Q8TDD1 881 aaKnown RBP6.08□□□□□ -1.44
SSR1-202ENST00000397511 GDPD2Q9HCC8 539 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 DLC1Q96QB1 1528 aa6.08□□□□□ -1.44
SSR1-202ENST00000397511 KCNQ3O43525 872 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 HMMRO75330 724 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 KCNA6P17658 529 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 KIAA2012Q0VF49 1180 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 ZNF771Q7L3S4 317 aaPredicted RBP6.07□□□□□ -1.44
SSR1-202ENST00000397511 MPNDQ8N594 471 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 IL17REQ8NFR9 667 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 IL25Q9H293 177 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 CDC42BPGQ6DT37 1551 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 USP6P35125 1406 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 GNAT3A8MTJ3 354 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 ST18O60284 1047 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 RABEP1Q15276 862 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 LRRC59Q96AG4 307 aaKnown RBP6.07□□□□□ -1.44
SSR1-202ENST00000397511 LRRCC1Q9C099 1032 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 LGR6Q9HBX8 967 aa6.07□□□□□ -1.44
SSR1-202ENST00000397511 ERC2O15083 957 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 SURF6O75683 361 aaKnown RBP6.06□□□□□ -1.44
SSR1-202ENST00000397511 ATP2B3Q16720 1220 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 HDGFL1Q5TGJ6 251 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 MPRIPQ6WCQ1 1025 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 RNF214Q8ND24 703 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 NSFL1CQ9UNZ2 370 aaKnown RBP6.06□□□□□ -1.44
SSR1-202ENST00000397511 CCDC9Q9Y3X0 531 aaKnown RBP6.06□□□□□ -1.44
SSR1-202ENST00000397511 PTPRCP08575 1304 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 SPATA31D1Q6ZQQ2 1576 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 REC8O95072 547 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 NBPF7P0C2Y1 421 aaPredicted RBP6.06□□□□□ -1.44
SSR1-202ENST00000397511 MX1P20591 662 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 PTPRUQ92729 1446 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 SETD1AO15047 1707 aaKnown RBP6.06□□□□□ -1.44
SSR1-202ENST00000397511 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.06□□□□□ -1.44
SSR1-202ENST00000397511 PLEKHG3A1L390 1219 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 PTMAP06454 111 aaKnown RBP6.06□□□□□ -1.44
SSR1-202ENST00000397511 UBTFL1P0CB47 393 aaPredicted RBP6.06□□□□□ -1.44
SSR1-202ENST00000397511 CPA1P15085 419 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 HOXC9P31274 260 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 GTF2F1P35269 517 aaKnown RBP eCLIP6.06□□□□□ -1.44
SSR1-202ENST00000397511 CCDC30Q5VVM6 783 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 ZNF710Q8N1W2 664 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 KIF3AQ9Y496 699 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 CRB1P82279 1406 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 ADAMTS13Q76LX8 1427 aa6.06□□□□□ -1.44
SSR1-202ENST00000397511 CEP170BQ9Y4F5 1589 aaPredicted RBP6.06□□□□□ -1.44
SSR1-202ENST00000397511 PRAMEF22A3QJZ6 481 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 SRGAP3O43295 1099 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 CCT4P50991 539 aaKnown RBP6.05□□□□□ -1.44
SSR1-202ENST00000397511 AIMP1Q12904 312 aaKnown RBP6.05□□□□□ -1.44
SSR1-202ENST00000397511 OS9Q13438 667 aaPredicted RBP6.05□□□□□ -1.44
SSR1-202ENST00000397511 ESCO1Q5FWF5 840 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 PDCL2Q8N4E4 241 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 DNAJC2Q99543 621 aaKnown RBP6.05□□□□□ -1.44
SSR1-202ENST00000397511 PEAK1Q9H792 1746 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 OVOS2A0A0J9YW53 1432 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 PI4KAP2A4QPH2 592 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 RGPD8O14715 1765 aaPredicted RBP6.05□□□□□ -1.44
SSR1-202ENST00000397511 FLT4P35916 1363 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 TAF7Q15545 349 aaPredicted RBP6.05□□□□□ -1.44
SSR1-202ENST00000397511 ITSN1Q15811 1721 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 ZSCAN23Q3MJ62 389 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 OVOS2Q6IE36 1432 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 PPP1R42Q7Z4L9 355 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 PI4KAP1Q8N8J0 262 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 TMX3Q96JJ7 454 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 USP44Q9H0E7 712 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 RBSNQ9H1K0 784 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 CHPF2Q9P2E5 772 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 SPG7Q9UQ90 795 aa6.05□□□□□ -1.44
SSR1-202ENST00000397511 SYCE3A1L190 88 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 CCDC66A2RUB6 948 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 TRHP20396 242 aaPredicted RBP6.04□□□□□ -1.44
SSR1-202ENST00000397511 PIP4K2AP48426 406 aaPredicted RBP6.04□□□□□ -1.44
SSR1-202ENST00000397511 CWC27Q6UX04 472 aaKnown RBP6.04□□□□□ -1.44
SSR1-202ENST00000397511 CLEC17AQ6ZS10 378 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 ZDHHC9Q9Y397 364 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 C3P01024 1663 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 SPDYE4A6NLX3 237 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 PRIM1P49642 420 aaKnown RBP6.04□□□□□ -1.44
SSR1-202ENST00000397511 IRX3P78415 501 aaPredicted RBP6.04□□□□□ -1.44
SSR1-202ENST00000397511 SLC20A2Q08357 652 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 NBPF6Q5VWK0 638 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 TEX2Q8IWB9 1127 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 JARID2Q92833 1246 aaPredicted RBP6.04□□□□□ -1.44
SSR1-202ENST00000397511 NBPF4Q96M43 638 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 MON2Q7Z3U7 1717 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 IRX5P78411 483 aaPredicted RBP6.04□□□□□ -1.44
SSR1-202ENST00000397511 PSME1Q06323 249 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 GPT2Q8TD30 523 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 FEZ1Q99689 392 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 ESYT1Q9BSJ8 1104 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 LMBRD1Q9NUN5 540 aa6.04□□□□□ -1.44
SSR1-202ENST00000397511 BCCIPQ9P287 314 aaKnown RBP eCLIP6.04□□□□□ -1.44
SSR1-202ENST00000397511 PA2G4Q9UQ80 394 aaKnown RBP6.04□□□□□ -1.44
SSR1-202ENST00000397511 KIAA0232Q92628 1395 aa6.03□□□□□ -1.44
SSR1-202ENST00000397511 GNAI3P08754 354 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms