RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 VEGFAP15692 232 aaPredicted RBP20.54■□□□□ 0.88
SEC13-206ENST00000397102 PRELPP51888 382 aa20.54■□□□□ 0.88
SEC13-206ENST00000397102 POLR3GLQ9BT43 218 aa20.54■□□□□ 0.88
SEC13-206ENST00000397102 VIRMAQ69YN4 1812 aaKnown RBP20.53■□□□□ 0.88
SEC13-206ENST00000397102 DNAJC10Q8IXB1 793 aa20.53■□□□□ 0.88
SEC13-206ENST00000397102 NFIXQ14938 502 aa20.52■□□□□ 0.88
SEC13-206ENST00000397102 SULT6B1Q6IMI4 303 aa20.52■□□□□ 0.88
SEC13-206ENST00000397102 NARFQ9UHQ1 456 aa20.52■□□□□ 0.88
SEC13-206ENST00000397102 MRC1P22897 1456 aa20.51■□□□□ 0.87
SEC13-206ENST00000397102 COL15A1P39059 1388 aa20.51■□□□□ 0.87
SEC13-206ENST00000397102 HSPA1AP0DMV8 641 aaKnown RBP20.51■□□□□ 0.87
SEC13-206ENST00000397102 HSPA1BP0DMV9 641 aaKnown RBP20.51■□□□□ 0.87
SEC13-206ENST00000397102 CYP19A1P11511 503 aaPredicted RBP20.5■□□□□ 0.87
SEC13-206ENST00000397102 AKAP4Q5JQC9 854 aa20.5■□□□□ 0.87
SEC13-206ENST00000397102 TTLL6Q8N841 843 aa20.5■□□□□ 0.87
SEC13-206ENST00000397102 SLC52A2Q9HAB3 445 aa20.5■□□□□ 0.87
SEC13-206ENST00000397102 SERPINB2P05120 415 aa20.48■□□□□ 0.87
SEC13-206ENST00000397102 PANK3Q9H999 370 aa20.48■□□□□ 0.87
SEC13-206ENST00000397102 TIMELESSQ9UNS1 1208 aa20.48■□□□□ 0.87
SEC13-206ENST00000397102 DICER1Q9UPY3 1922 aaKnown RBP20.47■□□□□ 0.87
SEC13-206ENST00000397102 BCL2L12Q9HB09 334 aa20.47■□□□□ 0.87
SEC13-206ENST00000397102 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
SEC13-206ENST00000397102 NFKBIEO00221 500 aa20.46■□□□□ 0.87
SEC13-206ENST00000397102 IL13P35225 146 aa20.46■□□□□ 0.87
SEC13-206ENST00000397102 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
SEC13-206ENST00000397102 C2CD5Q86YS7 1000 aa20.46■□□□□ 0.87
SEC13-206ENST00000397102 PCNTO95613 3336 aa20.46■□□□□ 0.87
SEC13-206ENST00000397102 CARMIL3Q8ND23 1372 aa20.46■□□□□ 0.87
SEC13-206ENST00000397102 UBR2Q8IWV8 1755 aa20.45■□□□□ 0.86
SEC13-206ENST00000397102 H0YIN7 160 aa20.45■□□□□ 0.86
SEC13-206ENST00000397102 SLC39A6Q13433 755 aa20.45■□□□□ 0.86
SEC13-206ENST00000397102 LGR6Q9HBX8 967 aa20.45■□□□□ 0.86
SEC13-206ENST00000397102 ANKRD31Q8N7Z5 1873 aa20.45■□□□□ 0.86
SEC13-206ENST00000397102 FER1L6Q2WGJ9 1857 aa20.44■□□□□ 0.86
SEC13-206ENST00000397102 POTECB2RU33 542 aa20.44■□□□□ 0.86
SEC13-206ENST00000397102 VSIG10Q8N0Z9 540 aa20.44■□□□□ 0.86
SEC13-206ENST00000397102 RNMTO43148 476 aaKnown RBP20.43■□□□□ 0.86
SEC13-206ENST00000397102 DPY19L2Q6NUT2 758 aa20.43■□□□□ 0.86
SEC13-206ENST00000397102 COL11A2P13942 1736 aaPredicted RBP20.41■□□□□ 0.86
SEC13-206ENST00000397102 PDZRN3Q9UPQ7 1066 aa20.41■□□□□ 0.86
SEC13-206ENST00000397102 SCN7AQ01118 1682 aa20.41■□□□□ 0.86
SEC13-206ENST00000397102 CANXP27824 592 aaKnown RBP20.39■□□□□ 0.85
SEC13-206ENST00000397102 A0A087WZG4 1122 aa20.38■□□□□ 0.85
SEC13-206ENST00000397102 EIF5P55010 431 aaKnown RBP20.38■□□□□ 0.85
SEC13-206ENST00000397102 ERFEQ4G0M1 354 aa20.38■□□□□ 0.85
SEC13-206ENST00000397102 BICDL1Q6ZP65 573 aa20.38■□□□□ 0.85
SEC13-206ENST00000397102 ZNF622Q969S3 477 aaKnown RBP eCLIP20.38■□□□□ 0.85
SEC13-206ENST00000397102 CREBZFQ9NS37 354 aa20.38■□□□□ 0.85
SEC13-206ENST00000397102 C21orf2O43822 256 aa20.37■□□□□ 0.85
SEC13-206ENST00000397102 PDE6BP35913 854 aa20.37■□□□□ 0.85
SEC13-206ENST00000397102 EIF4G2P78344 907 aaKnown RBP eCLIP20.37■□□□□ 0.85
SEC13-206ENST00000397102 CHADLQ6NUI6 762 aa20.37■□□□□ 0.85
SEC13-206ENST00000397102 BRIP1Q9BX63 1249 aa20.37■□□□□ 0.85
SEC13-206ENST00000397102 CACNA1SQ13698 1873 aa20.37■□□□□ 0.85
SEC13-206ENST00000397102 ARFGEF2Q9Y6D5 1785 aa20.36■□□□□ 0.85
SEC13-206ENST00000397102 LTBP3Q9NS15 1303 aa20.36■□□□□ 0.85
SEC13-206ENST00000397102 STARD3NLO95772 234 aa20.36■□□□□ 0.85
SEC13-206ENST00000397102 KNSTRNQ9Y448 316 aa20.36■□□□□ 0.85
SEC13-206ENST00000397102 HMOX1P09601 288 aa20.35■□□□□ 0.85
SEC13-206ENST00000397102 HSPA5P11021 654 aaKnown RBP20.35■□□□□ 0.85
SEC13-206ENST00000397102 MTHFSDQ2M296 383 aaKnown RBP20.35■□□□□ 0.85
SEC13-206ENST00000397102 TBC1D9BQ66K14 1250 aa20.35■□□□□ 0.85
SEC13-206ENST00000397102 PRR5LQ6MZQ0 368 aa20.34■□□□□ 0.85
SEC13-206ENST00000397102 TTC5Q8N0Z6 440 aa20.34■□□□□ 0.85
SEC13-206ENST00000397102 TAOK3Q9H2K8 898 aa20.34■□□□□ 0.85
SEC13-206ENST00000397102 ZNF219Q9P2Y4 722 aaPredicted RBP20.34■□□□□ 0.85
SEC13-206ENST00000397102 MKRN1Q9UHC7 482 aaKnown RBP20.34■□□□□ 0.85
SEC13-206ENST00000397102 SLX4Q8IY92 1834 aa20.33■□□□□ 0.85
SEC13-206ENST00000397102 SCN4AP35499 1836 aa20.32■□□□□ 0.84
SEC13-206ENST00000397102 SIPA1L3O60292 1781 aaPredicted RBP20.31■□□□□ 0.84
SEC13-206ENST00000397102 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
SEC13-206ENST00000397102 DDNO94850 711 aaPredicted RBP20.31■□□□□ 0.84
SEC13-206ENST00000397102 POTEIP0CG38 1075 aa20.31■□□□□ 0.84
SEC13-206ENST00000397102 POTEJP0CG39 1038 aa20.31■□□□□ 0.84
SEC13-206ENST00000397102 CNKSR1Q969H4 720 aa20.31■□□□□ 0.84
SEC13-206ENST00000397102 TEX13AQ9BXU3 409 aaPredicted RBP20.31■□□□□ 0.84
SEC13-206ENST00000397102 CNTNAP1P78357 1384 aa20.31■□□□□ 0.84
SEC13-206ENST00000397102 HEG1Q9ULI3 1381 aa20.31■□□□□ 0.84
SEC13-206ENST00000397102 BCORQ6W2J9 1755 aa20.31■□□□□ 0.84
SEC13-206ENST00000397102 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
SEC13-206ENST00000397102 SOGA3Q5TF21 947 aa20.3■□□□□ 0.84
SEC13-206ENST00000397102 STYK1Q6J9G0 422 aa20.3■□□□□ 0.84
SEC13-206ENST00000397102 CCDC24Q8N4L8 307 aa20.3■□□□□ 0.84
SEC13-206ENST00000397102 IL6STP40189 918 aaPredicted RBP20.29■□□□□ 0.84
SEC13-206ENST00000397102 TRIM26Q12899 539 aaPredicted RBP20.29■□□□□ 0.84
SEC13-206ENST00000397102 ZNF496Q96IT1 587 aaPredicted RBP20.29■□□□□ 0.84
SEC13-206ENST00000397102 TBC1D2BQ9UPU7 963 aa20.29■□□□□ 0.84
SEC13-206ENST00000397102 PASKQ96RG2 1323 aa20.28■□□□□ 0.84
SEC13-206ENST00000397102 IQCA1LA6NCM1 817 aa20.28■□□□□ 0.84
SEC13-206ENST00000397102 FOXN1O15353 648 aa20.28■□□□□ 0.84
SEC13-206ENST00000397102 PRPF40BQ6NWY9 871 aaKnown RBP20.28■□□□□ 0.84
SEC13-206ENST00000397102 ZNF790Q6PG37 636 aa20.28■□□□□ 0.84
SEC13-206ENST00000397102 CNBD1Q8NA66 436 aa20.28■□□□□ 0.84
SEC13-206ENST00000397102 PRDM10Q9NQV6 1147 aa20.28■□□□□ 0.84
SEC13-206ENST00000397102 ZNF330Q9Y3S2 320 aaPredicted RBP20.28■□□□□ 0.84
SEC13-206ENST00000397102 DIAPH1O60610 1272 aaKnown RBP20.27■□□□□ 0.84
SEC13-206ENST00000397102 SRGNP10124 158 aa20.27■□□□□ 0.84
SEC13-206ENST00000397102 ST5P78524 1137 aa20.27■□□□□ 0.84
SEC13-206ENST00000397102 LDHDQ86WU2 507 aa20.27■□□□□ 0.84
SEC13-206ENST00000397102 MASTLQ96GX5 879 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms