RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 VEGFAP15692 232 aaPredicted RBP18.5■□□□□ 0.55
SEC13-205ENST00000397101 LMNB1P20700 586 aa18.5■□□□□ 0.55
SEC13-205ENST00000397101 TNNT2P45379 298 aaPredicted RBP18.5■□□□□ 0.55
SEC13-205ENST00000397101 TNS4Q8IZW8 715 aa18.5■□□□□ 0.55
SEC13-205ENST00000397101 SOS1Q07889 1333 aaPredicted RBP18.49■□□□□ 0.55
SEC13-205ENST00000397101 NARFQ9UHQ1 456 aa18.48■□□□□ 0.55
SEC13-205ENST00000397101 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
SEC13-205ENST00000397101 AEBP1Q8IUX7 1158 aa18.47■□□□□ 0.55
SEC13-205ENST00000397101 NRXN2Q9P2S2 1712 aa18.46■□□□□ 0.55
SEC13-205ENST00000397101 AKAP4Q5JQC9 854 aa18.46■□□□□ 0.55
SEC13-205ENST00000397101 TTLL6Q8N841 843 aa18.46■□□□□ 0.55
SEC13-205ENST00000397101 CYP19A1P11511 503 aaPredicted RBP18.45■□□□□ 0.54
SEC13-205ENST00000397101 RASSF7Q02833 373 aa18.45■□□□□ 0.54
SEC13-205ENST00000397101 NFIXQ14938 502 aa18.45■□□□□ 0.54
SEC13-205ENST00000397101 SULT6B1Q6IMI4 303 aa18.45■□□□□ 0.54
SEC13-205ENST00000397101 DNAJC10Q8IXB1 793 aa18.45■□□□□ 0.54
SEC13-205ENST00000397101 SLC52A2Q9HAB3 445 aa18.45■□□□□ 0.54
SEC13-205ENST00000397101 VSIG10Q8N0Z9 540 aa18.44■□□□□ 0.54
SEC13-205ENST00000397101 PDZRN3Q9UPQ7 1066 aa18.44■□□□□ 0.54
SEC13-205ENST00000397101 SCN11AQ9UI33 1791 aa18.44■□□□□ 0.54
SEC13-205ENST00000397101 HSPA1AP0DMV8 641 aaKnown RBP18.43■□□□□ 0.54
SEC13-205ENST00000397101 HSPA1BP0DMV9 641 aaKnown RBP18.43■□□□□ 0.54
SEC13-205ENST00000397101 MRC1P22897 1456 aa18.43■□□□□ 0.54
SEC13-205ENST00000397101 COL15A1P39059 1388 aa18.42■□□□□ 0.54
SEC13-205ENST00000397101 DLEC1Q9Y238 1755 aa18.42■□□□□ 0.54
SEC13-205ENST00000397101 SERPINB2P05120 415 aa18.42■□□□□ 0.54
SEC13-205ENST00000397101 IL13P35225 146 aa18.42■□□□□ 0.54
SEC13-205ENST00000397101 PANK3Q9H999 370 aa18.42■□□□□ 0.54
SEC13-205ENST00000397101 BCL2L12Q9HB09 334 aa18.42■□□□□ 0.54
SEC13-205ENST00000397101 NFKBIEO00221 500 aa18.41■□□□□ 0.54
SEC13-205ENST00000397101 AFDNP55196 1824 aaKnown RBP18.41■□□□□ 0.54
SEC13-205ENST00000397101 POTECB2RU33 542 aa18.4■□□□□ 0.54
SEC13-205ENST00000397101 H0YIN7 160 aa18.4■□□□□ 0.54
SEC13-205ENST00000397101 DIEXFQ68CQ4 756 aaKnown RBP18.4■□□□□ 0.54
SEC13-205ENST00000397101 DPY19L2Q6NUT2 758 aa18.4■□□□□ 0.54
SEC13-205ENST00000397101 MORC1Q86VD1 984 aa18.4■□□□□ 0.54
SEC13-205ENST00000397101 ZBTB1Q9Y2K1 713 aa18.4■□□□□ 0.54
SEC13-205ENST00000397101 CAPN15O75808 1086 aa18.39■□□□□ 0.53
SEC13-205ENST00000397101 C2CD5Q86YS7 1000 aa18.39■□□□□ 0.53
SEC13-205ENST00000397101 RNMTO43148 476 aaKnown RBP18.38■□□□□ 0.53
SEC13-205ENST00000397101 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
SEC13-205ENST00000397101 CREBZFQ9NS37 354 aa18.37■□□□□ 0.53
SEC13-205ENST00000397101 TIAM2Q8IVF5 1701 aa18.37■□□□□ 0.53
SEC13-205ENST00000397101 A0A087WZG4 1122 aa18.36■□□□□ 0.53
SEC13-205ENST00000397101 EIF5P55010 431 aaKnown RBP18.36■□□□□ 0.53
SEC13-205ENST00000397101 CNGB1Q14028 1251 aaPredicted RBP18.36■□□□□ 0.53
SEC13-205ENST00000397101 LTBP3Q9NS15 1303 aa18.36■□□□□ 0.53
SEC13-205ENST00000397101 CARMIL3Q8ND23 1372 aa18.35■□□□□ 0.53
SEC13-205ENST00000397101 PDE6BP35913 854 aa18.35■□□□□ 0.53
SEC13-205ENST00000397101 SLC39A6Q13433 755 aa18.35■□□□□ 0.53
SEC13-205ENST00000397101 BRIP1Q9BX63 1249 aa18.35■□□□□ 0.53
SEC13-205ENST00000397101 STARD3NLO95772 234 aa18.34■□□□□ 0.53
SEC13-205ENST00000397101 KNSTRNQ9Y448 316 aa18.34■□□□□ 0.53
SEC13-205ENST00000397101 ERFEQ4G0M1 354 aa18.33■□□□□ 0.52
SEC13-205ENST00000397101 CHADLQ6NUI6 762 aa18.33■□□□□ 0.52
SEC13-205ENST00000397101 CCDC88AQ3V6T2 1871 aa18.32■□□□□ 0.52
SEC13-205ENST00000397101 DICER1Q9UPY3 1922 aaKnown RBP18.31■□□□□ 0.52
SEC13-205ENST00000397101 CANXP27824 592 aaKnown RBP18.31■□□□□ 0.52
SEC13-205ENST00000397101 TEX13AQ9BXU3 409 aaPredicted RBP18.31■□□□□ 0.52
SEC13-205ENST00000397101 UBR2Q8IWV8 1755 aa18.31■□□□□ 0.52
SEC13-205ENST00000397101 FER1L6Q2WGJ9 1857 aa18.31■□□□□ 0.52
SEC13-205ENST00000397101 C21orf2O43822 256 aa18.3■□□□□ 0.52
SEC13-205ENST00000397101 MTHFSDQ2M296 383 aaKnown RBP18.3■□□□□ 0.52
SEC13-205ENST00000397101 SOGA3Q5TF21 947 aa18.3■□□□□ 0.52
SEC13-205ENST00000397101 TBC1D9BQ66K14 1250 aa18.3■□□□□ 0.52
SEC13-205ENST00000397101 PRR5LQ6MZQ0 368 aa18.3■□□□□ 0.52
SEC13-205ENST00000397101 ZNF622Q969S3 477 aaKnown RBP eCLIP18.3■□□□□ 0.52
SEC13-205ENST00000397101 TAOK3Q9H2K8 898 aa18.3■□□□□ 0.52
SEC13-205ENST00000397101 PRDM10Q9NQV6 1147 aa18.3■□□□□ 0.52
SEC13-205ENST00000397101 ANP32CO43423 234 aa18.29■□□□□ 0.52
SEC13-205ENST00000397101 IL6STP40189 918 aaPredicted RBP18.29■□□□□ 0.52
SEC13-205ENST00000397101 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
SEC13-205ENST00000397101 TTC5Q8N0Z6 440 aa18.29■□□□□ 0.52
SEC13-205ENST00000397101 CNKSR1Q969H4 720 aa18.29■□□□□ 0.52
SEC13-205ENST00000397101 IQCA1LA6NCM1 817 aa18.28■□□□□ 0.52
SEC13-205ENST00000397101 STYK1Q6J9G0 422 aa18.28■□□□□ 0.52
SEC13-205ENST00000397101 BICDL1Q6ZP65 573 aa18.28■□□□□ 0.52
SEC13-205ENST00000397101 ANKRD31Q8N7Z5 1873 aa18.28■□□□□ 0.52
SEC13-205ENST00000397101 CNTNAP1P78357 1384 aa18.28■□□□□ 0.52
SEC13-205ENST00000397101 PASKQ96RG2 1323 aa18.27■□□□□ 0.52
SEC13-205ENST00000397101 L3MBTL3Q96JM7 780 aaPredicted RBP18.27■□□□□ 0.52
SEC13-205ENST00000397101 SCN7AQ01118 1682 aa18.27■□□□□ 0.52
SEC13-205ENST00000397101 HEG1Q9ULI3 1381 aa18.27■□□□□ 0.51
SEC13-205ENST00000397101 HMOX1P09601 288 aa18.26■□□□□ 0.51
SEC13-205ENST00000397101 CC2D1BQ5T0F9 858 aaKnown RBP18.26■□□□□ 0.51
SEC13-205ENST00000397101 LDHDQ86WU2 507 aa18.26■□□□□ 0.51
SEC13-205ENST00000397101 MKRN1Q9UHC7 482 aaKnown RBP18.26■□□□□ 0.51
SEC13-205ENST00000397101 VIRMAQ69YN4 1812 aaKnown RBP18.26■□□□□ 0.51
SEC13-205ENST00000397101 DDNO94850 711 aaPredicted RBP18.25■□□□□ 0.51
SEC13-205ENST00000397101 SRGNP10124 158 aa18.25■□□□□ 0.51
SEC13-205ENST00000397101 ZNF790Q6PG37 636 aa18.25■□□□□ 0.51
SEC13-205ENST00000397101 MASTLQ96GX5 879 aa18.25■□□□□ 0.51
SEC13-205ENST00000397101 ZNF496Q96IT1 587 aaPredicted RBP18.25■□□□□ 0.51
SEC13-205ENST00000397101 SETDB2Q96T68 719 aa18.25■□□□□ 0.51
SEC13-205ENST00000397101 COL11A2P13942 1736 aaPredicted RBP18.24■□□□□ 0.51
SEC13-205ENST00000397101 PER1O15534 1290 aaPredicted RBP18.24■□□□□ 0.51
SEC13-205ENST00000397101 DIAPH1O60610 1272 aaKnown RBP18.24■□□□□ 0.51
SEC13-205ENST00000397101 ST5P78524 1137 aa18.24■□□□□ 0.51
SEC13-205ENST00000397101 CNBD1Q8NA66 436 aa18.24■□□□□ 0.51
SEC13-205ENST00000397101 FOXN1O15353 648 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms