RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 DALRD3Q5D0E6 543 aaKnown RBP17.99■□□□□ 0.47
RPA3-202ENST00000396682 NMRK2Q9NPI5 230 aa17.99■□□□□ 0.47
RPA3-202ENST00000396682 COL15A1P39059 1388 aa17.99■□□□□ 0.47
RPA3-202ENST00000396682 NRXN2Q9P2S2 1712 aa17.98■□□□□ 0.47
RPA3-202ENST00000396682 ZPR1O75312 459 aa17.98■□□□□ 0.47
RPA3-202ENST00000396682 C9orf131Q5VYM1 1079 aa17.98■□□□□ 0.47
RPA3-202ENST00000396682 BCL2L12Q9HB09 334 aa17.98■□□□□ 0.47
RPA3-202ENST00000396682 NARFQ9UHQ1 456 aa17.98■□□□□ 0.47
RPA3-202ENST00000396682 NPC1L1Q9UHC9 1359 aa17.97■□□□□ 0.47
RPA3-202ENST00000396682 NFIXQ14938 502 aa17.97■□□□□ 0.47
RPA3-202ENST00000396682 TOMM70O94826 608 aa17.96■□□□□ 0.47
RPA3-202ENST00000396682 VSIG10Q8N0Z9 540 aa17.96■□□□□ 0.47
RPA3-202ENST00000396682 SBF1O95248 1867 aa17.95■□□□□ 0.46
RPA3-202ENST00000396682 SIPA1L3O60292 1781 aaPredicted RBP17.95■□□□□ 0.46
RPA3-202ENST00000396682 DLEC1Q9Y238 1755 aa17.94■□□□□ 0.46
RPA3-202ENST00000396682 IL17REQ8NFR9 667 aa17.94■□□□□ 0.46
RPA3-202ENST00000396682 CNGB1Q14028 1251 aaPredicted RBP17.93■□□□□ 0.46
RPA3-202ENST00000396682 RNF181Q9P0P0 153 aa17.93■□□□□ 0.46
RPA3-202ENST00000396682 CARMIL3Q8ND23 1372 aa17.92■□□□□ 0.46
RPA3-202ENST00000396682 U2SURPO15042 1029 aaKnown RBP17.92■□□□□ 0.46
RPA3-202ENST00000396682 SERPINB2P05120 415 aa17.92■□□□□ 0.46
RPA3-202ENST00000396682 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
RPA3-202ENST00000396682 EIF5P55010 431 aaKnown RBP17.92■□□□□ 0.46
RPA3-202ENST00000396682 ZNF496Q96IT1 587 aaPredicted RBP17.92■□□□□ 0.46
RPA3-202ENST00000396682 APLP1P51693 650 aa17.91■□□□□ 0.46
RPA3-202ENST00000396682 IFFO2Q5TF58 517 aa17.91■□□□□ 0.46
RPA3-202ENST00000396682 TTC5Q8N0Z6 440 aa17.91■□□□□ 0.46
RPA3-202ENST00000396682 HEG1Q9ULI3 1381 aa17.91■□□□□ 0.46
RPA3-202ENST00000396682 SCN7AQ01118 1682 aa17.9■□□□□ 0.46
RPA3-202ENST00000396682 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
RPA3-202ENST00000396682 RASSF7Q02833 373 aa17.9■□□□□ 0.46
RPA3-202ENST00000396682 ZNF790Q6PG37 636 aa17.9■□□□□ 0.46
RPA3-202ENST00000396682 STARD3NLO95772 234 aa17.89■□□□□ 0.45
RPA3-202ENST00000396682 PRELPP51888 382 aa17.89■□□□□ 0.45
RPA3-202ENST00000396682 DNAJC5GQ8N7S2 189 aa17.89■□□□□ 0.45
RPA3-202ENST00000396682 GAS2L2Q8NHY3 880 aa17.89■□□□□ 0.45
RPA3-202ENST00000396682 CEMIPQ8WUJ3 1361 aa17.89■□□□□ 0.45
RPA3-202ENST00000396682 ANKRD31Q8N7Z5 1873 aa17.88■□□□□ 0.45
RPA3-202ENST00000396682 TEFQ10587 303 aa17.88■□□□□ 0.45
RPA3-202ENST00000396682 BICDL1Q6ZP65 573 aa17.88■□□□□ 0.45
RPA3-202ENST00000396682 RBM46Q8TBY0 533 aaKnown RBP17.88■□□□□ 0.45
RPA3-202ENST00000396682 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
RPA3-202ENST00000396682 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
RPA3-202ENST00000396682 WDR90Q96KV7 1748 aa17.87■□□□□ 0.45
RPA3-202ENST00000396682 TBC1D9BQ66K14 1250 aa17.87■□□□□ 0.45
RPA3-202ENST00000396682 KDM2BQ8NHM5 1336 aa17.87■□□□□ 0.45
RPA3-202ENST00000396682 KCNQ3O43525 872 aa17.86■□□□□ 0.45
RPA3-202ENST00000396682 C2CD5Q86YS7 1000 aa17.86■□□□□ 0.45
RPA3-202ENST00000396682 TTLL6Q8N841 843 aa17.86■□□□□ 0.45
RPA3-202ENST00000396682 RSPH6AQ9H0K4 717 aa17.86■□□□□ 0.45
RPA3-202ENST00000396682 RRAGCQ9HB90 399 aa17.86■□□□□ 0.45
RPA3-202ENST00000396682 A0A087WZG4 1122 aa17.85■□□□□ 0.45
RPA3-202ENST00000396682 COL11A2P13942 1736 aaPredicted RBP17.85■□□□□ 0.45
RPA3-202ENST00000396682 PRKAR2BP31323 418 aa17.85■□□□□ 0.45
RPA3-202ENST00000396682 TEX13AQ9BXU3 409 aaPredicted RBP17.85■□□□□ 0.45
RPA3-202ENST00000396682 TBC1D2BQ9UPU7 963 aa17.85■□□□□ 0.45
RPA3-202ENST00000396682 H0YIN7 160 aa17.84■□□□□ 0.45
RPA3-202ENST00000396682 NFKBIEO00221 500 aa17.84■□□□□ 0.45
RPA3-202ENST00000396682 A1BGP04217 495 aa17.84■□□□□ 0.45
RPA3-202ENST00000396682 LMNB1P20700 586 aa17.84■□□□□ 0.45
RPA3-202ENST00000396682 IL6STP40189 918 aaPredicted RBP17.84■□□□□ 0.45
RPA3-202ENST00000396682 C16orf71Q8IYS4 520 aaPredicted RBP17.84■□□□□ 0.45
RPA3-202ENST00000396682 FMNL2Q96PY5 1086 aa17.84■□□□□ 0.45
RPA3-202ENST00000396682 TIAM2Q8IVF5 1701 aa17.84■□□□□ 0.45
RPA3-202ENST00000396682 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
RPA3-202ENST00000396682 HTRA3P83110 453 aa17.83■□□□□ 0.44
RPA3-202ENST00000396682 FSTL1Q12841 308 aa17.83■□□□□ 0.44
RPA3-202ENST00000396682 PRR5LQ6MZQ0 368 aa17.83■□□□□ 0.44
RPA3-202ENST00000396682 CCDC24Q8N4L8 307 aa17.83■□□□□ 0.44
RPA3-202ENST00000396682 ZNF330Q9Y3S2 320 aaPredicted RBP17.83■□□□□ 0.44
RPA3-202ENST00000396682 CCDC88AQ3V6T2 1871 aa17.83■□□□□ 0.44
RPA3-202ENST00000396682 BCORQ6W2J9 1755 aa17.82■□□□□ 0.44
RPA3-202ENST00000396682 CAMTA2O94983 1202 aa17.82■□□□□ 0.44
RPA3-202ENST00000396682 BTBD11A6QL63 1104 aa17.81■□□□□ 0.44
RPA3-202ENST00000396682 BRIP1Q9BX63 1249 aa17.81■□□□□ 0.44
RPA3-202ENST00000396682 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
RPA3-202ENST00000396682 CFAP53Q96M91 514 aa17.8■□□□□ 0.44
RPA3-202ENST00000396682 PCNTO95613 3336 aa17.8■□□□□ 0.44
RPA3-202ENST00000396682 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
RPA3-202ENST00000396682 GLTPD2A6NH11 291 aa17.79■□□□□ 0.44
RPA3-202ENST00000396682 PPP2R1AP30153 589 aa17.79■□□□□ 0.44
RPA3-202ENST00000396682 PIP4K2AP48426 406 aaPredicted RBP17.79■□□□□ 0.44
RPA3-202ENST00000396682 ZNF622Q969S3 477 aaKnown RBP eCLIP17.79■□□□□ 0.44
RPA3-202ENST00000396682 USP16Q9Y5T5 823 aa17.79■□□□□ 0.44
RPA3-202ENST00000396682 PDE6BP35913 854 aa17.78■□□□□ 0.44
RPA3-202ENST00000396682 MCM10Q7L590 875 aa17.78■□□□□ 0.44
RPA3-202ENST00000396682 C21orf2O43822 256 aa17.77■□□□□ 0.44
RPA3-202ENST00000396682 U2AF1L5P0DN76 240 aaPredicted RBP17.77■□□□□ 0.44
RPA3-202ENST00000396682 U2AF1Q01081 240 aaKnown RBP eCLIP17.77■□□□□ 0.44
RPA3-202ENST00000396682 DZIP3Q86Y13 1208 aaKnown RBP17.77■□□□□ 0.44
RPA3-202ENST00000396682 CNBD1Q8NA66 436 aa17.77■□□□□ 0.44
RPA3-202ENST00000396682 SMC1BQ8NDV3 1235 aa17.77■□□□□ 0.44
RPA3-202ENST00000396682 KLRG1Q96E93 195 aa17.77■□□□□ 0.44
RPA3-202ENST00000396682 SETDB2Q96T68 719 aa17.77■□□□□ 0.44
RPA3-202ENST00000396682 PDZRN3Q9UPQ7 1066 aa17.77■□□□□ 0.44
RPA3-202ENST00000396682 SLX4Q8IY92 1834 aa17.77■□□□□ 0.43
RPA3-202ENST00000396682 DCTN1Q14203 1278 aa17.76■□□□□ 0.43
RPA3-202ENST00000396682 ZNF219Q9P2Y4 722 aaPredicted RBP17.76■□□□□ 0.43
RPA3-202ENST00000396682 NUDCQ9Y266 331 aa17.76■□□□□ 0.43
RPA3-202ENST00000396682 DICER1Q9UPY3 1922 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms