RNA–Protein interactions for RNA: ENST00000396372.2

CALCA-203, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best) BASIC

Gene CALCA, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-203ENST00000396372 ZNF790Q6PG37 636 aa18.93■□□□□ 0.62
CALCA-203ENST00000396372 HEG1Q9ULI3 1381 aa18.93■□□□□ 0.62
CALCA-203ENST00000396372 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
CALCA-203ENST00000396372 AFDNP55196 1824 aaKnown RBP18.92■□□□□ 0.62
CALCA-203ENST00000396372 DLG5Q8TDM6 1919 aa18.92■□□□□ 0.62
CALCA-203ENST00000396372 FCHSD2O94868 740 aa18.91■□□□□ 0.62
CALCA-203ENST00000396372 STARD3NLO95772 234 aa18.91■□□□□ 0.62
CALCA-203ENST00000396372 DPEP1P16444 411 aa18.91■□□□□ 0.62
CALCA-203ENST00000396372 TGFB2P61812 414 aa18.91■□□□□ 0.62
CALCA-203ENST00000396372 ATP10DQ9P241 1426 aa18.91■□□□□ 0.62
CALCA-203ENST00000396372 SCN7AQ01118 1682 aa18.9■□□□□ 0.62
CALCA-203ENST00000396372 MCM10Q7L590 875 aa18.9■□□□□ 0.62
CALCA-203ENST00000396372 RTF1Q92541 710 aaKnown RBP18.9■□□□□ 0.62
CALCA-203ENST00000396372 BCS1LQ9Y276 419 aa18.9■□□□□ 0.62
CALCA-203ENST00000396372 BTBD11A6QL63 1104 aa18.89■□□□□ 0.61
CALCA-203ENST00000396372 KCNQ3O43525 872 aa18.89■□□□□ 0.61
CALCA-203ENST00000396372 FMNL2Q96PY5 1086 aa18.89■□□□□ 0.61
CALCA-203ENST00000396372 NARFQ9UHQ1 456 aa18.89■□□□□ 0.61
CALCA-203ENST00000396372 ZNF330Q9Y3S2 320 aaPredicted RBP18.89■□□□□ 0.61
CALCA-203ENST00000396372 ARFGEF1Q9Y6D6 1849 aa18.88■□□□□ 0.61
CALCA-203ENST00000396372 POLRMTO00411 1230 aaKnown RBP18.88■□□□□ 0.61
CALCA-203ENST00000396372 ADCY9O60503 1353 aa18.87■□□□□ 0.61
CALCA-203ENST00000396372 GIGYF1O75420 1035 aaPredicted RBP18.87■□□□□ 0.61
CALCA-203ENST00000396372 DCTN1Q14203 1278 aa18.87■□□□□ 0.61
CALCA-203ENST00000396372 NFIXQ14938 502 aa18.87■□□□□ 0.61
CALCA-203ENST00000396372 NRXN2Q9P2S2 1712 aa18.86■□□□□ 0.61
CALCA-203ENST00000396372 TM4SF1P30408 202 aa18.86■□□□□ 0.61
CALCA-203ENST00000396372 ZNF526Q8TF50 670 aaPredicted RBP18.86■□□□□ 0.61
CALCA-203ENST00000396372 BCL2L12Q9HB09 334 aa18.86■□□□□ 0.61
CALCA-203ENST00000396372 NEFMP07197 916 aa18.85■□□□□ 0.61
CALCA-203ENST00000396372 EIF5P55010 431 aaKnown RBP18.85■□□□□ 0.61
CALCA-203ENST00000396372 TEX13AQ9BXU3 409 aaPredicted RBP18.85■□□□□ 0.61
CALCA-203ENST00000396372 BCORQ6W2J9 1755 aa18.84■□□□□ 0.61
CALCA-203ENST00000396372 A0A087WZG4 1122 aa18.84■□□□□ 0.61
CALCA-203ENST00000396372 A1BGP04217 495 aa18.84■□□□□ 0.61
CALCA-203ENST00000396372 CHRNA5P30532 468 aa18.84■□□□□ 0.61
CALCA-203ENST00000396372 KCNA3P22001 575 aa18.83■□□□□ 0.6
CALCA-203ENST00000396372 C1QTNF8P60827 252 aa18.83■□□□□ 0.6
CALCA-203ENST00000396372 BICDL1Q6ZP65 573 aa18.83■□□□□ 0.6
CALCA-203ENST00000396372 DLEC1Q9Y238 1755 aa18.83■□□□□ 0.6
CALCA-203ENST00000396372 DDX10Q13206 875 aaKnown RBP18.82■□□□□ 0.6
CALCA-203ENST00000396372 ARHGAP27Q6ZUM4 889 aa18.82■□□□□ 0.6
CALCA-203ENST00000396372 PIM2Q9P1W9 311 aa18.82■□□□□ 0.6
CALCA-203ENST00000396372 TBC1D2BQ9UPU7 963 aa18.82■□□□□ 0.6
CALCA-203ENST00000396372 LAMB4A4D0S4 1761 aa18.82■□□□□ 0.6
CALCA-203ENST00000396372 KDM3BQ7LBC6 1761 aa18.81■□□□□ 0.6
CALCA-203ENST00000396372 PRAMEF22A3QJZ6 481 aa18.81■□□□□ 0.6
CALCA-203ENST00000396372 HTATSF1O43719 755 aaKnown RBP18.81■□□□□ 0.6
CALCA-203ENST00000396372 SERPINB2P05120 415 aa18.81■□□□□ 0.6
CALCA-203ENST00000396372 IL6STP40189 918 aaPredicted RBP18.81■□□□□ 0.6
CALCA-203ENST00000396372 PIP4K2AP48426 406 aaPredicted RBP18.81■□□□□ 0.6
CALCA-203ENST00000396372 NPM2Q86SE8 214 aaKnown RBP18.81■□□□□ 0.6
CALCA-203ENST00000396372 GPBP1L1Q9HC44 474 aaPredicted RBP18.81■□□□□ 0.6
CALCA-203ENST00000396372 CARMIL3Q8ND23 1372 aa18.81■□□□□ 0.6
CALCA-203ENST00000396372 MAPK8IP3Q9UPT6 1336 aa18.8■□□□□ 0.6
CALCA-203ENST00000396372 ANKRD31Q8N7Z5 1873 aa18.8■□□□□ 0.6
CALCA-203ENST00000396372 DALRD3Q5D0E6 543 aaKnown RBP18.8■□□□□ 0.6
CALCA-203ENST00000396372 USP16Q9Y5T5 823 aa18.8■□□□□ 0.6
CALCA-203ENST00000396372 SNRPA1P09661 255 aaKnown RBP18.79■□□□□ 0.6
CALCA-203ENST00000396372 RALBP1Q15311 655 aa18.79■□□□□ 0.6
CALCA-203ENST00000396372 TBC1D9BQ66K14 1250 aa18.79■□□□□ 0.6
CALCA-203ENST00000396372 PLEKHF1Q96S99 279 aa18.79■□□□□ 0.6
CALCA-203ENST00000396372 MIS18AQ9NYP9 233 aa18.79■□□□□ 0.6
CALCA-203ENST00000396372 SENP3-EIF4A1A0A087X0R7 540 aa18.78■□□□□ 0.6
CALCA-203ENST00000396372 NFE2L2Q16236 605 aa18.78■□□□□ 0.6
CALCA-203ENST00000396372 COL11A2P13942 1736 aaPredicted RBP18.77■□□□□ 0.6
CALCA-203ENST00000396372 TAF7Q15545 349 aaPredicted RBP18.77■□□□□ 0.6
CALCA-203ENST00000396372 DZIP3Q86Y13 1208 aaKnown RBP18.77■□□□□ 0.6
CALCA-203ENST00000396372 THUMPD2Q9BTF0 503 aaKnown RBP18.77■□□□□ 0.6
CALCA-203ENST00000396372 CAMTA2O94983 1202 aa18.76■□□□□ 0.59
CALCA-203ENST00000396372 C2CD5Q86YS7 1000 aa18.75■□□□□ 0.59
CALCA-203ENST00000396372 CCDC24Q8N4L8 307 aa18.75■□□□□ 0.59
CALCA-203ENST00000396372 PNNQ9H307 717 aaKnown RBP18.75■□□□□ 0.59
CALCA-203ENST00000396372 CACNA1SQ13698 1873 aa18.75■□□□□ 0.59
CALCA-203ENST00000396372 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
CALCA-203ENST00000396372 SBF1O95248 1867 aa18.74■□□□□ 0.59
CALCA-203ENST00000396372 NPHP1O15259 732 aa18.73■□□□□ 0.59
CALCA-203ENST00000396372 C9orf131Q5VYM1 1079 aa18.73■□□□□ 0.59
CALCA-203ENST00000396372 NBPF26B4DH59 902 aa18.72■□□□□ 0.59
CALCA-203ENST00000396372 H0YIN7 160 aa18.72■□□□□ 0.59
CALCA-203ENST00000396372 PRR5LQ6MZQ0 368 aa18.72■□□□□ 0.59
CALCA-203ENST00000396372 NBPF10Q6P3W6 841 aaKnown RBP18.72■□□□□ 0.59
CALCA-203ENST00000396372 NBPF15Q8N660 670 aa18.72■□□□□ 0.59
CALCA-203ENST00000396372 PNISRQ8TF01 805 aaKnown RBP18.72■□□□□ 0.59
CALCA-203ENST00000396372 SETDB2Q96T68 719 aa18.72■□□□□ 0.59
CALCA-203ENST00000396372 CNBD1Q8NA66 436 aa18.71■□□□□ 0.59
CALCA-203ENST00000396372 RASSF7Q02833 373 aa18.7■□□□□ 0.58
CALCA-203ENST00000396372 CCDC88AQ3V6T2 1871 aa18.7■□□□□ 0.58
CALCA-203ENST00000396372 TTLL6Q8N841 843 aa18.7■□□□□ 0.58
CALCA-203ENST00000396372 RNF181Q9P0P0 153 aa18.7■□□□□ 0.58
CALCA-203ENST00000396372 ZNF652Q9Y2D9 606 aa18.7■□□□□ 0.58
CALCA-203ENST00000396372 CCDC146Q8IYE0 955 aa18.69■□□□□ 0.58
CALCA-203ENST00000396372 ZNF622Q969S3 477 aaKnown RBP eCLIP18.69■□□□□ 0.58
CALCA-203ENST00000396372 BRIP1Q9BX63 1249 aa18.69■□□□□ 0.58
CALCA-203ENST00000396372 TIAM2Q8IVF5 1701 aa18.69■□□□□ 0.58
CALCA-203ENST00000396372 PDE6BP35913 854 aa18.68■□□□□ 0.58
CALCA-203ENST00000396372 RIPK4P57078 832 aa18.68■□□□□ 0.58
CALCA-203ENST00000396372 EIF4A1P60842 406 aaKnown RBP18.68■□□□□ 0.58
CALCA-203ENST00000396372 ST5P78524 1137 aa18.68■□□□□ 0.58
CALCA-203ENST00000396372 NGEFQ8N5V2 710 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms