RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 MCM10Q7L590 875 aa24.44■■□□□ 1.5
FXN-203ENST00000396366 C10orf71Q711Q0 1435 aa24.44■■□□□ 1.5
FXN-203ENST00000396366 ZPR1O75312 459 aa24.43■■□□□ 1.5
FXN-203ENST00000396366 DCTN1Q14203 1278 aa24.43■■□□□ 1.5
FXN-203ENST00000396366 BTBD11A6QL63 1104 aa24.42■■□□□ 1.5
FXN-203ENST00000396366 DPEP1P16444 411 aa24.42■■□□□ 1.5
FXN-203ENST00000396366 TM4SF1P30408 202 aa24.42■■□□□ 1.5
FXN-203ENST00000396366 TGFB2P61812 414 aa24.42■■□□□ 1.5
FXN-203ENST00000396366 COL15A1P39059 1388 aa24.42■■□□□ 1.5
FXN-203ENST00000396366 HEG1Q9ULI3 1381 aa24.42■■□□□ 1.5
FXN-203ENST00000396366 NARFQ9UHQ1 456 aa24.41■■□□□ 1.5
FXN-203ENST00000396366 STARD3NLO95772 234 aa24.4■■□□□ 1.5
FXN-203ENST00000396366 BCL2L12Q9HB09 334 aa24.4■■□□□ 1.5
FXN-203ENST00000396366 POLRMTO00411 1230 aaKnown RBP24.39■■□□□ 1.49
FXN-203ENST00000396366 DDX10Q13206 875 aaKnown RBP24.39■■□□□ 1.49
FXN-203ENST00000396366 RTF1Q92541 710 aaKnown RBP24.39■■□□□ 1.49
FXN-203ENST00000396366 FMNL2Q96PY5 1086 aa24.39■■□□□ 1.49
FXN-203ENST00000396366 EIF5P55010 431 aaKnown RBP24.38■■□□□ 1.49
FXN-203ENST00000396366 KCNA3P22001 575 aa24.37■■□□□ 1.49
FXN-203ENST00000396366 NFIXQ14938 502 aa24.37■■□□□ 1.49
FXN-203ENST00000396366 BCS1LQ9Y276 419 aa24.37■■□□□ 1.49
FXN-203ENST00000396366 PRAMEF22A3QJZ6 481 aa24.36■■□□□ 1.49
FXN-203ENST00000396366 A1BGP04217 495 aa24.36■■□□□ 1.49
FXN-203ENST00000396366 TEX13AQ9BXU3 409 aaPredicted RBP24.36■■□□□ 1.49
FXN-203ENST00000396366 PLEKHF1Q96S99 279 aa24.35■■□□□ 1.49
FXN-203ENST00000396366 ZNF330Q9Y3S2 320 aaPredicted RBP24.35■■□□□ 1.49
FXN-203ENST00000396366 USP16Q9Y5T5 823 aa24.35■■□□□ 1.49
FXN-203ENST00000396366 MIS18AQ9NYP9 233 aa24.34■■□□□ 1.49
FXN-203ENST00000396366 AFDNP55196 1824 aaKnown RBP24.33■■□□□ 1.49
FXN-203ENST00000396366 HTATSF1O43719 755 aaKnown RBP24.33■■□□□ 1.49
FXN-203ENST00000396366 CHRNA5P30532 468 aa24.33■■□□□ 1.49
FXN-203ENST00000396366 TBC1D2BQ9UPU7 963 aa24.33■■□□□ 1.49
FXN-203ENST00000396366 DLG5Q8TDM6 1919 aa24.33■■□□□ 1.49
FXN-203ENST00000396366 BRCA1P38398 1863 aaKnown RBP24.32■■□□□ 1.48
FXN-203ENST00000396366 PIP4K2AP48426 406 aaPredicted RBP24.32■■□□□ 1.48
FXN-203ENST00000396366 BICDL1Q6ZP65 573 aa24.32■■□□□ 1.48
FXN-203ENST00000396366 ATP10DQ9P241 1426 aa24.32■■□□□ 1.48
FXN-203ENST00000396366 A0A087WZG4 1122 aa24.3■■□□□ 1.48
FXN-203ENST00000396366 SERPINB2P05120 415 aa24.3■■□□□ 1.48
FXN-203ENST00000396366 IL6STP40189 918 aaPredicted RBP24.3■■□□□ 1.48
FXN-203ENST00000396366 RALBP1Q15311 655 aa24.3■■□□□ 1.48
FXN-203ENST00000396366 TAF7Q15545 349 aaPredicted RBP24.29■■□□□ 1.48
FXN-203ENST00000396366 ARHGAP27Q6ZUM4 889 aa24.29■■□□□ 1.48
FXN-203ENST00000396366 THUMPD2Q9BTF0 503 aaKnown RBP24.29■■□□□ 1.48
FXN-203ENST00000396366 PIM2Q9P1W9 311 aa24.29■■□□□ 1.48
FXN-203ENST00000396366 ADCY9O60503 1353 aa24.29■■□□□ 1.48
FXN-203ENST00000396366 NEFMP07197 916 aa24.28■■□□□ 1.48
FXN-203ENST00000396366 TBC1D9BQ66K14 1250 aa24.28■■□□□ 1.48
FXN-203ENST00000396366 ZNF526Q8TF50 670 aaPredicted RBP24.28■■□□□ 1.48
FXN-203ENST00000396366 NRXN2Q9P2S2 1712 aa24.27■■□□□ 1.48
FXN-203ENST00000396366 SNRPA1P09661 255 aaKnown RBP24.27■■□□□ 1.48
FXN-203ENST00000396366 C1QTNF8P60827 252 aa24.27■■□□□ 1.48
FXN-203ENST00000396366 NFE2L2Q16236 605 aa24.27■■□□□ 1.48
FXN-203ENST00000396366 GIGYF1O75420 1035 aaPredicted RBP24.26■■□□□ 1.47
FXN-203ENST00000396366 DALRD3Q5D0E6 543 aaKnown RBP24.25■■□□□ 1.47
FXN-203ENST00000396366 CAMTA2O94983 1202 aa24.24■■□□□ 1.47
FXN-203ENST00000396366 CCDC24Q8N4L8 307 aa24.24■■□□□ 1.47
FXN-203ENST00000396366 CARMIL3Q8ND23 1372 aa24.24■■□□□ 1.47
FXN-203ENST00000396366 SCN7AQ01118 1682 aa24.24■■□□□ 1.47
FXN-203ENST00000396366 NBPF26B4DH59 902 aa24.23■■□□□ 1.47
FXN-203ENST00000396366 NBPF10Q6P3W6 841 aaKnown RBP24.23■■□□□ 1.47
FXN-203ENST00000396366 NBPF15Q8N660 670 aa24.23■■□□□ 1.47
FXN-203ENST00000396366 MAPK8IP3Q9UPT6 1336 aa24.23■■□□□ 1.47
FXN-203ENST00000396366 ARFGEF1Q9Y6D6 1849 aa24.23■■□□□ 1.47
FXN-203ENST00000396366 NPM2Q86SE8 214 aaKnown RBP24.22■■□□□ 1.47
FXN-203ENST00000396366 DZIP3Q86Y13 1208 aaKnown RBP24.22■■□□□ 1.47
FXN-203ENST00000396366 GPBP1L1Q9HC44 474 aaPredicted RBP24.22■■□□□ 1.47
FXN-203ENST00000396366 PNNQ9H307 717 aaKnown RBP24.21■■□□□ 1.47
FXN-203ENST00000396366 MYBBP1AQ9BQG0 1328 aaKnown RBP24.2■■□□□ 1.46
FXN-203ENST00000396366 C2CD5Q86YS7 1000 aa24.19■■□□□ 1.46
FXN-203ENST00000396366 KDM3BQ7LBC6 1761 aa24.19■■□□□ 1.46
FXN-203ENST00000396366 RIPK4P57078 832 aa24.18■■□□□ 1.46
FXN-203ENST00000396366 PRR5LQ6MZQ0 368 aa24.18■■□□□ 1.46
FXN-203ENST00000396366 BCORQ6W2J9 1755 aa24.18■■□□□ 1.46
FXN-203ENST00000396366 ANKRD31Q8N7Z5 1873 aa24.17■■□□□ 1.46
FXN-203ENST00000396366 EIF4A1P60842 406 aaKnown RBP24.17■■□□□ 1.46
FXN-203ENST00000396366 CCDC146Q8IYE0 955 aa24.17■■□□□ 1.46
FXN-203ENST00000396366 PNISRQ8TF01 805 aaKnown RBP24.17■■□□□ 1.46
FXN-203ENST00000396366 SETDB2Q96T68 719 aa24.17■■□□□ 1.46
FXN-203ENST00000396366 RRP7AQ9Y3A4 280 aaKnown RBP24.16■■□□□ 1.46
FXN-203ENST00000396366 H0YIN7 160 aa24.15■■□□□ 1.46
FXN-203ENST00000396366 C9orf131Q5VYM1 1079 aa24.15■■□□□ 1.46
FXN-203ENST00000396366 DLEC1Q9Y238 1755 aa24.15■■□□□ 1.46
FXN-203ENST00000396366 SENP3-EIF4A1A0A087X0R7 540 aa24.14■■□□□ 1.45
FXN-203ENST00000396366 TMPOP42166 694 aaKnown RBP24.14■■□□□ 1.45
FXN-203ENST00000396366 NGEFQ8N5V2 710 aa24.14■■□□□ 1.45
FXN-203ENST00000396366 BRIP1Q9BX63 1249 aa24.13■■□□□ 1.45
FXN-203ENST00000396366 LAMB4A4D0S4 1761 aa24.13■■□□□ 1.45
FXN-203ENST00000396366 HLFQ16534 295 aa24.12■■□□□ 1.45
FXN-203ENST00000396366 TTLL6Q8N841 843 aa24.12■■□□□ 1.45
FXN-203ENST00000396366 CNBD1Q8NA66 436 aa24.12■■□□□ 1.45
FXN-203ENST00000396366 RASSF7Q02833 373 aa24.11■■□□□ 1.45
FXN-203ENST00000396366 NEUROD2Q15784 382 aa24.11■■□□□ 1.45
FXN-203ENST00000396366 CLEC4GQ6UXB4 293 aa24.11■■□□□ 1.45
FXN-203ENST00000396366 ZNF622Q969S3 477 aaKnown RBP eCLIP24.11■■□□□ 1.45
FXN-203ENST00000396366 PRKRIP1Q9H875 184 aaPredicted RBP24.11■■□□□ 1.45
FXN-203ENST00000396366 SBF1O95248 1867 aa24.11■■□□□ 1.45
FXN-203ENST00000396366 KIF3CO14782 793 aa24.1■■□□□ 1.45
FXN-203ENST00000396366 PDE6BP35913 854 aa24.1■■□□□ 1.45
FXN-203ENST00000396366 RNF181Q9P0P0 153 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms