RNA–Protein interactions for RNA: ENST00000396307.6

RAB27A-202, Transcript of RAB27A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB27A, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB27A-202ENST00000396307 CERS3Q8IU89 383 aa10.34□□□□□ -0.75
RAB27A-202ENST00000396307 THUMPD2Q9BTF0 503 aaKnown RBP10.33□□□□□ -0.76
RAB27A-202ENST00000396307 PTMAP06454 111 aaKnown RBP10.33□□□□□ -0.76
RAB27A-202ENST00000396307 RGS17Q9UGC6 210 aaPredicted RBP10.33□□□□□ -0.76
RAB27A-202ENST00000396307 CALD1Q05682 793 aaKnown RBP10.32□□□□□ -0.76
RAB27A-202ENST00000396307 NSD3Q9BZ95 1437 aa10.32□□□□□ -0.76
RAB27A-202ENST00000396307 DDX19BQ9UMR2 479 aa10.32□□□□□ -0.76
RAB27A-202ENST00000396307 CLSTN1O94985 981 aa10.32□□□□□ -0.76
RAB27A-202ENST00000396307 ATF7IPQ6VMQ6 1270 aa10.32□□□□□ -0.76
RAB27A-202ENST00000396307 GAS2L2Q8NHY3 880 aa10.32□□□□□ -0.76
RAB27A-202ENST00000396307 RIPK4P57078 832 aa10.31□□□□□ -0.76
RAB27A-202ENST00000396307 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
RAB27A-202ENST00000396307 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
RAB27A-202ENST00000396307 RBM27Q9P2N5 1060 aaKnown RBP10.31□□□□□ -0.76
RAB27A-202ENST00000396307 MYH3P11055 1940 aa10.31□□□□□ -0.76
RAB27A-202ENST00000396307 BCL9LQ86UU0 1499 aa10.31□□□□□ -0.76
RAB27A-202ENST00000396307 PRPF40AO75400 957 aaKnown RBP10.31□□□□□ -0.76
RAB27A-202ENST00000396307 SRPK2P78362 688 aaKnown RBP10.3□□□□□ -0.76
RAB27A-202ENST00000396307 PKP1Q13835 747 aa10.3□□□□□ -0.76
RAB27A-202ENST00000396307 PAPPA2Q9BXP8 1791 aa10.3□□□□□ -0.76
RAB27A-202ENST00000396307 FAM193AP78312 1265 aa10.3□□□□□ -0.76
RAB27A-202ENST00000396307 CHD1LQ86WJ1 897 aa10.3□□□□□ -0.76
RAB27A-202ENST00000396307 DOCK2Q92608 1830 aa10.29□□□□□ -0.76
RAB27A-202ENST00000396307 CCDC125Q86Z20 511 aa10.29□□□□□ -0.76
RAB27A-202ENST00000396307 PXDNLA1KZ92 1463 aa10.29□□□□□ -0.76
RAB27A-202ENST00000396307 RGS12O14924 1447 aa10.29□□□□□ -0.76
RAB27A-202ENST00000396307 HMOX1P09601 288 aa10.29□□□□□ -0.76
RAB27A-202ENST00000396307 PRDM16Q9HAZ2 1276 aa10.29□□□□□ -0.76
RAB27A-202ENST00000396307 K7ELQ4 463 aaPredicted RBP10.28□□□□□ -0.76
RAB27A-202ENST00000396307 SOX12O15370 315 aa10.28□□□□□ -0.76
RAB27A-202ENST00000396307 ZSCAN30Q86W11 494 aa10.28□□□□□ -0.76
RAB27A-202ENST00000396307 TBC1D9Q6ZT07 1266 aa10.28□□□□□ -0.76
RAB27A-202ENST00000396307 RNF216Q9NWF9 866 aaPredicted RBP10.28□□□□□ -0.76
RAB27A-202ENST00000396307 PTMSP20962 102 aa10.28□□□□□ -0.76
RAB27A-202ENST00000396307 WDR63Q8IWG1 891 aa10.28□□□□□ -0.76
RAB27A-202ENST00000396307 CEMIPQ8WUJ3 1361 aa10.27□□□□□ -0.76
RAB27A-202ENST00000396307 FOCADQ5VW36 1801 aa10.27□□□□□ -0.76
RAB27A-202ENST00000396307 FAM177BA6PVY3 158 aa10.27□□□□□ -0.76
RAB27A-202ENST00000396307 MAPK8IP2Q13387 824 aaPredicted RBP10.27□□□□□ -0.76
RAB27A-202ENST00000396307 TSC1Q92574 1164 aa10.27□□□□□ -0.76
RAB27A-202ENST00000396307 PLEKHF1Q96S99 279 aa10.27□□□□□ -0.76
RAB27A-202ENST00000396307 EVC2Q86UK5 1308 aa10.27□□□□□ -0.77
RAB27A-202ENST00000396307 SKOR2Q2VWA4 1001 aaPredicted RBP10.27□□□□□ -0.77
RAB27A-202ENST00000396307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.77
RAB27A-202ENST00000396307 UQCRHLA0A096LP55 91 aa10.27□□□□□ -0.77
RAB27A-202ENST00000396307 BAG4O95429 457 aaKnown RBP10.27□□□□□ -0.77
RAB27A-202ENST00000396307 UQCRHP07919 91 aa10.27□□□□□ -0.77
RAB27A-202ENST00000396307 ZHX1Q9UKY1 873 aaPredicted RBP10.27□□□□□ -0.77
RAB27A-202ENST00000396307 THRAP3Q9Y2W1 955 aaKnown RBP10.27□□□□□ -0.77
RAB27A-202ENST00000396307 IPO8O15397 1037 aaKnown RBP10.26□□□□□ -0.77
RAB27A-202ENST00000396307 DTNBO60941 627 aa10.26□□□□□ -0.77
RAB27A-202ENST00000396307 CCDC173Q0VFZ6 552 aa10.26□□□□□ -0.77
RAB27A-202ENST00000396307 JARID2Q92833 1246 aaPredicted RBP10.26□□□□□ -0.77
RAB27A-202ENST00000396307 PHF8Q9UPP1 1060 aa10.26□□□□□ -0.77
RAB27A-202ENST00000396307 SYCE3A1L190 88 aa10.26□□□□□ -0.77
RAB27A-202ENST00000396307 TMPOP42166 694 aaKnown RBP10.26□□□□□ -0.77
RAB27A-202ENST00000396307 PRIM1P49642 420 aaKnown RBP10.26□□□□□ -0.77
RAB27A-202ENST00000396307 RAB3GAP1Q15042 981 aa10.26□□□□□ -0.77
RAB27A-202ENST00000396307 C16orf71Q8IYS4 520 aaPredicted RBP10.26□□□□□ -0.77
RAB27A-202ENST00000396307 CRB1P82279 1406 aa10.26□□□□□ -0.77
RAB27A-202ENST00000396307 PDCL3Q9H2J4 239 aa10.26□□□□□ -0.77
RAB27A-202ENST00000396307 TPM2P07951 284 aa10.25□□□□□ -0.77
RAB27A-202ENST00000396307 ZGPATQ8N5A5 531 aaKnown RBP10.25□□□□□ -0.77
RAB27A-202ENST00000396307 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
RAB27A-202ENST00000396307 AFDNP55196 1824 aaKnown RBP10.25□□□□□ -0.77
RAB27A-202ENST00000396307 NUP98P52948 1817 aa10.25□□□□□ -0.77
RAB27A-202ENST00000396307 SPEF2Q9C093 1822 aa10.25□□□□□ -0.77
RAB27A-202ENST00000396307 CCDC27Q2M243 656 aa10.24□□□□□ -0.77
RAB27A-202ENST00000396307 NECTIN2Q92692 538 aa10.24□□□□□ -0.77
RAB27A-202ENST00000396307 GDPD2Q9HCC8 539 aa10.24□□□□□ -0.77
RAB27A-202ENST00000396307 VPS72Q15906 364 aa10.24□□□□□ -0.77
RAB27A-202ENST00000396307 ZNF830Q96NB3 372 aaPredicted RBP10.24□□□□□ -0.77
RAB27A-202ENST00000396307 RBSNQ9H1K0 784 aa10.24□□□□□ -0.77
RAB27A-202ENST00000396307 SMARCA5O60264 1052 aaPredicted RBP10.24□□□□□ -0.77
RAB27A-202ENST00000396307 HMGB2P26583 209 aaKnown RBP10.24□□□□□ -0.77
RAB27A-202ENST00000396307 SMC5Q8IY18 1101 aa10.24□□□□□ -0.77
RAB27A-202ENST00000396307 NGEFQ8N5V2 710 aa10.24□□□□□ -0.77
RAB27A-202ENST00000396307 ZBTB40Q9NUA8 1239 aa10.24□□□□□ -0.77
RAB27A-202ENST00000396307 VGLL3A8MV65 326 aa10.23□□□□□ -0.77
RAB27A-202ENST00000396307 ZSCAN23Q3MJ62 389 aa10.23□□□□□ -0.77
RAB27A-202ENST00000396307 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.23□□□□□ -0.77
RAB27A-202ENST00000396307 PRAM1Q96QH2 718 aa10.23□□□□□ -0.77
RAB27A-202ENST00000396307 NUCB1Q02818 461 aa10.23□□□□□ -0.77
RAB27A-202ENST00000396307 BARGINQ6ZT62 677 aa10.23□□□□□ -0.77
RAB27A-202ENST00000396307 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
RAB27A-202ENST00000396307 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
RAB27A-202ENST00000396307 HDAC1Q13547 482 aaPredicted RBP10.23□□□□□ -0.77
RAB27A-202ENST00000396307 TSPYL6Q8N831 410 aa10.23□□□□□ -0.77
RAB27A-202ENST00000396307 OTUD7AQ8TE49 926 aaPredicted RBP10.23□□□□□ -0.77
RAB27A-202ENST00000396307 COL4A1P02462 1669 aa10.22□□□□□ -0.77
RAB27A-202ENST00000396307 DDX60LQ5H9U9 1706 aaKnown RBP10.22□□□□□ -0.77
RAB27A-202ENST00000396307 TSHZ3Q63HK5 1081 aa10.22□□□□□ -0.77
RAB27A-202ENST00000396307 ANKRD31Q8N7Z5 1873 aa10.21□□□□□ -0.77
RAB27A-202ENST00000396307 APPP05067 770 aa10.21□□□□□ -0.77
RAB27A-202ENST00000396307 PRKAR2BP31323 418 aa10.21□□□□□ -0.77
RAB27A-202ENST00000396307 RBM25P49756 843 aaKnown RBP10.21□□□□□ -0.77
RAB27A-202ENST00000396307 DCTN1Q14203 1278 aa10.21□□□□□ -0.77
RAB27A-202ENST00000396307 CDCA7Q9BWT1 371 aaPredicted RBP10.21□□□□□ -0.77
RAB27A-202ENST00000396307 ZBTB22O15209 634 aa10.21□□□□□ -0.78
RAB27A-202ENST00000396307 KLHL40Q2TBA0 621 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms