RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 ANKRD24Q8TF21 1146 aa17.14■□□□□ 0.33
CCHCR1-203ENST00000396268 PDCL3Q9H2J4 239 aa17.14■□□□□ 0.33
CCHCR1-203ENST00000396268 LMBRD1Q9NUN5 540 aa17.14■□□□□ 0.33
CCHCR1-203ENST00000396268 RGPD5Q99666 1765 aa17.13■□□□□ 0.33
CCHCR1-203ENST00000396268 ZSCAN23Q3MJ62 389 aa17.13■□□□□ 0.33
CCHCR1-203ENST00000396268 PXDNQ92626 1479 aa17.13■□□□□ 0.33
CCHCR1-203ENST00000396268 KIAA0232Q92628 1395 aa17.12■□□□□ 0.33
CCHCR1-203ENST00000396268 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
CCHCR1-203ENST00000396268 NEK4P51957 841 aa17.12■□□□□ 0.33
CCHCR1-203ENST00000396268 PDE1AP54750 535 aa17.12■□□□□ 0.33
CCHCR1-203ENST00000396268 NOL8Q76FK4 1167 aaKnown RBP17.12■□□□□ 0.33
CCHCR1-203ENST00000396268 NECTIN2Q92692 538 aa17.11■□□□□ 0.33
CCHCR1-203ENST00000396268 CRB1P82279 1406 aa17.11■□□□□ 0.33
CCHCR1-203ENST00000396268 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
CCHCR1-203ENST00000396268 RNF214Q8ND24 703 aa17.1■□□□□ 0.33
CCHCR1-203ENST00000396268 IL17REQ8NFR9 667 aa17.1■□□□□ 0.33
CCHCR1-203ENST00000396268 RBSNQ9H1K0 784 aa17.1■□□□□ 0.33
CCHCR1-203ENST00000396268 IBTKQ9P2D0 1353 aaPredicted RBP17.1■□□□□ 0.33
CCHCR1-203ENST00000396268 PPP1R9BQ96SB3 815 aa17.1■□□□□ 0.33
CCHCR1-203ENST00000396268 PRDM10Q9NQV6 1147 aa17.1■□□□□ 0.33
CCHCR1-203ENST00000396268 CCT4P50991 539 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-203ENST00000396268 ZNF445P59923 1031 aa17.1■□□□□ 0.33
CCHCR1-203ENST00000396268 FOXD4L6Q3SYB3 417 aaPredicted RBP17.1■□□□□ 0.33
CCHCR1-203ENST00000396268 FOXD4L3Q6VB84 417 aaPredicted RBP17.1■□□□□ 0.33
CCHCR1-203ENST00000396268 TNS3Q68CZ2 1445 aa17.09■□□□□ 0.33
CCHCR1-203ENST00000396268 TRIM6-TRIM34B2RNG4 842 aa17.09■□□□□ 0.33
CCHCR1-203ENST00000396268 OFD1O75665 1012 aa17.09■□□□□ 0.33
CCHCR1-203ENST00000396268 GNAI2P04899 355 aa17.09■□□□□ 0.33
CCHCR1-203ENST00000396268 RILPL2Q969X0 211 aa17.09■□□□□ 0.33
CCHCR1-203ENST00000396268 STK31Q9BXU1 1019 aa17.09■□□□□ 0.33
CCHCR1-203ENST00000396268 ZDHHC9Q9Y397 364 aa17.09■□□□□ 0.33
CCHCR1-203ENST00000396268 PRIM1P49642 420 aaKnown RBP17.09■□□□□ 0.33
CCHCR1-203ENST00000396268 LGR6Q9HBX8 967 aa17.08■□□□□ 0.33
CCHCR1-203ENST00000396268 FKBP5Q13451 457 aaPredicted RBP17.08■□□□□ 0.32
CCHCR1-203ENST00000396268 GPT2Q8TD30 523 aa17.08■□□□□ 0.32
CCHCR1-203ENST00000396268 GNAT3A8MTJ3 354 aa17.07■□□□□ 0.32
CCHCR1-203ENST00000396268 JARID2Q92833 1246 aaPredicted RBP17.07■□□□□ 0.32
CCHCR1-203ENST00000396268 ANO2Q9NQ90 1003 aa17.07■□□□□ 0.32
CCHCR1-203ENST00000396268 TMX3Q96JJ7 454 aa17.07■□□□□ 0.32
CCHCR1-203ENST00000396268 UQCRHLA0A096LP55 91 aa17.07■□□□□ 0.32
CCHCR1-203ENST00000396268 UQCRHP07919 91 aa17.07■□□□□ 0.32
CCHCR1-203ENST00000396268 LRRCC1Q9C099 1032 aa17.07■□□□□ 0.32
CCHCR1-203ENST00000396268 ERBB3P21860 1342 aa17.06■□□□□ 0.32
CCHCR1-203ENST00000396268 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-203ENST00000396268 OSBPL3Q9H4L5 887 aa17.06■□□□□ 0.32
CCHCR1-203ENST00000396268 MCCP23508 829 aa17.05■□□□□ 0.32
CCHCR1-203ENST00000396268 NLRP2Q9NX02 1062 aa17.05■□□□□ 0.32
CCHCR1-203ENST00000396268 SYCE3A1L190 88 aa17.05■□□□□ 0.32
CCHCR1-203ENST00000396268 MX1P20591 662 aa17.05■□□□□ 0.32
CCHCR1-203ENST00000396268 PHRF1Q9P1Y6 1649 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-203ENST00000396268 MAP3K5Q99683 1374 aa17.04■□□□□ 0.32
CCHCR1-203ENST00000396268 PNMA6EA0A0J9YXQ4 647 aa17.04■□□□□ 0.32
CCHCR1-203ENST00000396268 MPRIPQ6WCQ1 1025 aa17.04■□□□□ 0.32
CCHCR1-203ENST00000396268 ESYT1Q9BSJ8 1104 aa17.04■□□□□ 0.32
CCHCR1-203ENST00000396268 FLIIQ13045 1269 aa17.04■□□□□ 0.32
CCHCR1-203ENST00000396268 PALD1Q9ULE6 856 aa17.04■□□□□ 0.32
CCHCR1-203ENST00000396268 TSC1Q92574 1164 aa17.04■□□□□ 0.32
CCHCR1-203ENST00000396268 TMEM63CQ9P1W3 806 aa17.04■□□□□ 0.32
CCHCR1-203ENST00000396268 NSFL1CQ9UNZ2 370 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-203ENST00000396268 SOS2Q07890 1332 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-203ENST00000396268 ZNF530Q6P9A1 599 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-203ENST00000396268 GNAI3P08754 354 aa17.02■□□□□ 0.32
CCHCR1-203ENST00000396268 UPF3BQ9BZI7 483 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-203ENST00000396268 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.31
CCHCR1-203ENST00000396268 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-203ENST00000396268 LRRFIP2Q9Y608 721 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-203ENST00000396268 KCNQ3O43525 872 aa17.01■□□□□ 0.31
CCHCR1-203ENST00000396268 CCDC30Q5VVM6 783 aa17.01■□□□□ 0.31
CCHCR1-203ENST00000396268 IL1RAPL2Q9NP60 686 aa17.01■□□□□ 0.31
CCHCR1-203ENST00000396268 CHMLP26374 656 aa17.01■□□□□ 0.31
CCHCR1-203ENST00000396268 MCM2P49736 904 aa17.01■□□□□ 0.31
CCHCR1-203ENST00000396268 FAM177BA6PVY3 158 aa17■□□□□ 0.31
CCHCR1-203ENST00000396268 CRYBG1Q9Y4K1 1723 aa17■□□□□ 0.31
CCHCR1-203ENST00000396268 COL18A1P39060 1754 aa17■□□□□ 0.31
CCHCR1-203ENST00000396268 PTMAP06454 111 aaKnown RBP17■□□□□ 0.31
CCHCR1-203ENST00000396268 LRSAM1Q6UWE0 723 aa17■□□□□ 0.31
CCHCR1-203ENST00000396268 ZHX1Q9UKY1 873 aaPredicted RBP17■□□□□ 0.31
CCHCR1-203ENST00000396268 ATP8B2P98198 1209 aa16.99■□□□□ 0.31
CCHCR1-203ENST00000396268 UNC5CLQ8IV45 518 aa16.99■□□□□ 0.31
CCHCR1-203ENST00000396268 DNTTIP2Q5QJE6 756 aaKnown RBP16.99■□□□□ 0.31
CCHCR1-203ENST00000396268 MBD3O95983 291 aa16.98■□□□□ 0.31
CCHCR1-203ENST00000396268 PRDM11Q9NQV5 511 aa16.98■□□□□ 0.31
CCHCR1-203ENST00000396268 MAP4K4O95819 1239 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-203ENST00000396268 ZNF830Q96NB3 372 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-203ENST00000396268 BRD1O95696 1058 aa16.98■□□□□ 0.31
CCHCR1-203ENST00000396268 PLEKHO1Q53GL0 409 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-203ENST00000396268 NUTM1Q86Y26 1132 aa16.98■□□□□ 0.31
CCHCR1-203ENST00000396268 GDPD2Q9HCC8 539 aa16.98■□□□□ 0.31
CCHCR1-203ENST00000396268 SALL3Q9BXA9 1300 aa16.97■□□□□ 0.31
CCHCR1-203ENST00000396268 A0A0U1RQG5 324 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-203ENST00000396268 TAF7Q15545 349 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-203ENST00000396268 HTATSF1O43719 755 aaKnown RBP16.97■□□□□ 0.31
CCHCR1-203ENST00000396268 UBTFL1P0CB47 393 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-203ENST00000396268 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
CCHCR1-203ENST00000396268 LRRC37A3O60309 1634 aa16.96■□□□□ 0.31
CCHCR1-203ENST00000396268 NCAPD2Q15021 1401 aa16.96■□□□□ 0.31
CCHCR1-203ENST00000396268 MEGF6O75095 1541 aa16.96■□□□□ 0.31
CCHCR1-203ENST00000396268 CUL4AQ13619 759 aa16.96■□□□□ 0.31
CCHCR1-203ENST00000396268 PDLIM2Q96JY6 352 aa16.96■□□□□ 0.31
CCHCR1-203ENST00000396268 ANAPC15P60006 121 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms