RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 POLRMTO00411 1230 aaKnown RBP13.55□□□□□ -0.24
LDHC-202ENST00000396215 CTCFP49711 727 aaPredicted RBP13.55□□□□□ -0.24
LDHC-202ENST00000396215 CNTNAP1P78357 1384 aa13.55□□□□□ -0.24
LDHC-202ENST00000396215 EYA1Q99502 592 aa13.54□□□□□ -0.24
LDHC-202ENST00000396215 WASHC2AQ641Q2 1341 aa13.54□□□□□ -0.24
LDHC-202ENST00000396215 CCDC88AQ3V6T2 1871 aa13.54□□□□□ -0.24
LDHC-202ENST00000396215 TIAM2Q8IVF5 1701 aa13.53□□□□□ -0.24
LDHC-202ENST00000396215 ANKRD26Q9UPS8 1709 aa13.53□□□□□ -0.24
LDHC-202ENST00000396215 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
LDHC-202ENST00000396215 MKRN1Q9UHC7 482 aaKnown RBP13.53□□□□□ -0.24
LDHC-202ENST00000396215 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
LDHC-202ENST00000396215 DLEC1Q9Y238 1755 aa13.53□□□□□ -0.24
LDHC-202ENST00000396215 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
LDHC-202ENST00000396215 RGS19P49795 217 aa13.52□□□□□ -0.25
LDHC-202ENST00000396215 NEUROD1Q13562 356 aa13.52□□□□□ -0.25
LDHC-202ENST00000396215 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
LDHC-202ENST00000396215 SRP68Q9UHB9 627 aaKnown RBP13.52□□□□□ -0.25
LDHC-202ENST00000396215 EMILIN1Q9Y6C2 1016 aa13.52□□□□□ -0.25
LDHC-202ENST00000396215 NRXN2Q9P2S2 1712 aa13.52□□□□□ -0.25
LDHC-202ENST00000396215 DICER1Q9UPY3 1922 aaKnown RBP13.51□□□□□ -0.25
LDHC-202ENST00000396215 HSP90AB1P08238 724 aaKnown RBP13.51□□□□□ -0.25
LDHC-202ENST00000396215 CRKLP46109 303 aaKnown RBP13.51□□□□□ -0.25
LDHC-202ENST00000396215 FAM161AQ3B820 660 aa13.51□□□□□ -0.25
LDHC-202ENST00000396215 WBP1LQ9NX94 342 aa13.51□□□□□ -0.25
LDHC-202ENST00000396215 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
LDHC-202ENST00000396215 PASKQ96RG2 1323 aa13.5□□□□□ -0.25
LDHC-202ENST00000396215 ST20-MTHFSA0A0A6YYL1 179 aa13.5□□□□□ -0.25
LDHC-202ENST00000396215 NFKBIEO00221 500 aa13.5□□□□□ -0.25
LDHC-202ENST00000396215 TTLL6Q8N841 843 aa13.5□□□□□ -0.25
LDHC-202ENST00000396215 AIDAQ96BJ3 306 aa13.5□□□□□ -0.25
LDHC-202ENST00000396215 ABHD8Q96I13 439 aa13.5□□□□□ -0.25
LDHC-202ENST00000396215 AFDNP55196 1824 aaKnown RBP13.49□□□□□ -0.25
LDHC-202ENST00000396215 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
LDHC-202ENST00000396215 INTS5Q6P9B9 1019 aaKnown RBP13.48□□□□□ -0.25
LDHC-202ENST00000396215 VEGFBP49765 207 aa13.47□□□□□ -0.25
LDHC-202ENST00000396215 LBX1P52954 281 aa13.47□□□□□ -0.25
LDHC-202ENST00000396215 TJP1Q07157 1748 aa13.47□□□□□ -0.25
LDHC-202ENST00000396215 TNRC18O15417 2968 aaPredicted RBP13.46□□□□□ -0.25
LDHC-202ENST00000396215 ZPR1O75312 459 aa13.46□□□□□ -0.25
LDHC-202ENST00000396215 MLLT1Q03111 559 aaPredicted RBP13.46□□□□□ -0.25
LDHC-202ENST00000396215 FER1L6Q2WGJ9 1857 aa13.46□□□□□ -0.26
LDHC-202ENST00000396215 LTBP3Q9NS15 1303 aa13.45□□□□□ -0.26
LDHC-202ENST00000396215 TMEM88BA6NKF7 163 aa13.45□□□□□ -0.26
LDHC-202ENST00000396215 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
LDHC-202ENST00000396215 POTEJP0CG39 1038 aa13.45□□□□□ -0.26
LDHC-202ENST00000396215 HSPA8P11142 646 aaKnown RBP13.45□□□□□ -0.26
LDHC-202ENST00000396215 CABP4P57796 275 aa13.45□□□□□ -0.26
LDHC-202ENST00000396215 NFIXQ14938 502 aa13.45□□□□□ -0.26
LDHC-202ENST00000396215 USPL1Q5W0Q7 1092 aa13.45□□□□□ -0.26
LDHC-202ENST00000396215 SOS1Q07889 1333 aaPredicted RBP13.44□□□□□ -0.26
LDHC-202ENST00000396215 H0YIN7 160 aa13.44□□□□□ -0.26
LDHC-202ENST00000396215 PPM1GO15355 546 aaPredicted RBP13.44□□□□□ -0.26
LDHC-202ENST00000396215 PTCD1O75127 700 aaKnown RBP13.44□□□□□ -0.26
LDHC-202ENST00000396215 ITGBL1O95965 494 aaPredicted RBP13.44□□□□□ -0.26
LDHC-202ENST00000396215 SERPINB2P05120 415 aa13.44□□□□□ -0.26
LDHC-202ENST00000396215 ERFEQ4G0M1 354 aa13.44□□□□□ -0.26
LDHC-202ENST00000396215 LDHDQ86WU2 507 aa13.44□□□□□ -0.26
LDHC-202ENST00000396215 CARD14Q9BXL6 1004 aa13.44□□□□□ -0.26
LDHC-202ENST00000396215 POLKQ9UBT6 870 aa13.44□□□□□ -0.26
LDHC-202ENST00000396215 NARFQ9UHQ1 456 aa13.44□□□□□ -0.26
LDHC-202ENST00000396215 PDZRN3Q9UPQ7 1066 aa13.44□□□□□ -0.26
LDHC-202ENST00000396215 SCN4AP35499 1836 aa13.43□□□□□ -0.26
LDHC-202ENST00000396215 RASSF10A6NK89 507 aa13.43□□□□□ -0.26
LDHC-202ENST00000396215 EIF4A2Q14240 407 aaKnown RBP13.43□□□□□ -0.26
LDHC-202ENST00000396215 AMOTQ4VCS5 1084 aa13.43□□□□□ -0.26
LDHC-202ENST00000396215 PLEKHO1Q53GL0 409 aaPredicted RBP13.43□□□□□ -0.26
LDHC-202ENST00000396215 C2CD5Q86YS7 1000 aa13.43□□□□□ -0.26
LDHC-202ENST00000396215 L3MBTL3Q96JM7 780 aaPredicted RBP13.43□□□□□ -0.26
LDHC-202ENST00000396215 IQCA1LA6NCM1 817 aa13.42□□□□□ -0.26
LDHC-202ENST00000396215 MAP2K1Q02750 393 aaPredicted RBP13.42□□□□□ -0.26
LDHC-202ENST00000396215 BCL2L12Q9HB09 334 aa13.42□□□□□ -0.26
LDHC-202ENST00000396215 DDNO94850 711 aaPredicted RBP13.41□□□□□ -0.26
LDHC-202ENST00000396215 NFATC2IPQ8NCF5 419 aa13.41□□□□□ -0.26
LDHC-202ENST00000396215 MTHFSP49914 203 aa13.4□□□□□ -0.26
LDHC-202ENST00000396215 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
LDHC-202ENST00000396215 ZNF530Q6P9A1 599 aaPredicted RBP13.4□□□□□ -0.26
LDHC-202ENST00000396215 TAF1DQ9H5J8 278 aaPredicted RBP13.4□□□□□ -0.26
LDHC-202ENST00000396215 CYP19A1P11511 503 aaPredicted RBP13.39□□□□□ -0.27
LDHC-202ENST00000396215 DEFB115Q30KQ5 88 aa13.39□□□□□ -0.27
LDHC-202ENST00000396215 CHRDL2Q6WN34 429 aa13.39□□□□□ -0.27
LDHC-202ENST00000396215 TAOK3Q9H2K8 898 aa13.39□□□□□ -0.27
LDHC-202ENST00000396215 CARMIL3Q8ND23 1372 aa13.39□□□□□ -0.27
LDHC-202ENST00000396215 ADAMTSL1Q8N6G6 1762 aa13.39□□□□□ -0.27
LDHC-202ENST00000396215 ANKRD31Q8N7Z5 1873 aa13.38□□□□□ -0.27
LDHC-202ENST00000396215 COL15A1P39059 1388 aa13.38□□□□□ -0.27
LDHC-202ENST00000396215 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
LDHC-202ENST00000396215 C21orf2O43822 256 aa13.38□□□□□ -0.27
LDHC-202ENST00000396215 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
LDHC-202ENST00000396215 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
LDHC-202ENST00000396215 DNAJC10Q8IXB1 793 aa13.38□□□□□ -0.27
LDHC-202ENST00000396215 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
LDHC-202ENST00000396215 BRIP1Q9BX63 1249 aa13.38□□□□□ -0.27
LDHC-202ENST00000396215 WDR33Q9C0J8 1336 aaKnown RBP13.38□□□□□ -0.27
LDHC-202ENST00000396215 PDE6BP35913 854 aa13.37□□□□□ -0.27
LDHC-202ENST00000396215 THSD7BQ9C0I4 1608 aa13.37□□□□□ -0.27
LDHC-202ENST00000396215 SCN11AQ9UI33 1791 aa13.37□□□□□ -0.27
LDHC-202ENST00000396215 CCDC85CA6NKD9 419 aa13.36□□□□□ -0.27
LDHC-202ENST00000396215 C1orf141Q5JVX7 400 aa13.36□□□□□ -0.27
LDHC-202ENST00000396215 SOGA3Q5TF21 947 aa13.36□□□□□ -0.27
LDHC-202ENST00000396215 PDE4DIPQ5VU43 2346 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms