RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 NARFQ9UHQ1 456 aa29.72■■■□□ 2.35
PARD6B-202ENST00000396039 POLRMTO00411 1230 aaKnown RBP29.71■■■□□ 2.35
PARD6B-202ENST00000396039 TM4SF1P30408 202 aa29.71■■■□□ 2.35
PARD6B-202ENST00000396039 DALRD3Q5D0E6 543 aaKnown RBP29.71■■■□□ 2.35
PARD6B-202ENST00000396039 USPL1Q5W0Q7 1092 aa29.71■■■□□ 2.35
PARD6B-202ENST00000396039 STARD3NLO95772 234 aa29.7■■■□□ 2.35
PARD6B-202ENST00000396039 KCNA3P22001 575 aa29.7■■■□□ 2.35
PARD6B-202ENST00000396039 TEFQ10587 303 aa29.7■■■□□ 2.35
PARD6B-202ENST00000396039 CFAP53Q96M91 514 aa29.7■■■□□ 2.35
PARD6B-202ENST00000396039 GNAT3A8MTJ3 354 aa29.69■■■□□ 2.34
PARD6B-202ENST00000396039 HSPA6P17066 643 aa29.69■■■□□ 2.34
PARD6B-202ENST00000396039 ZBTB1Q9Y2K1 713 aa29.69■■■□□ 2.34
PARD6B-202ENST00000396039 DLEC1Q9Y238 1755 aa29.69■■■□□ 2.34
PARD6B-202ENST00000396039 TEX13AQ9BXU3 409 aaPredicted RBP29.67■■■□□ 2.34
PARD6B-202ENST00000396039 A0A087WZG4 1122 aa29.66■■■□□ 2.34
PARD6B-202ENST00000396039 KIF3CO14782 793 aa29.66■■■□□ 2.34
PARD6B-202ENST00000396039 CEP350Q5VT06 3117 aa29.65■■■□□ 2.34
PARD6B-202ENST00000396039 SBF1O95248 1867 aa29.63■■■□□ 2.33
PARD6B-202ENST00000396039 SCN7AQ01118 1682 aa29.63■■■□□ 2.33
PARD6B-202ENST00000396039 NFIXQ14938 502 aa29.63■■■□□ 2.33
PARD6B-202ENST00000396039 ZNF790Q6PG37 636 aa29.63■■■□□ 2.33
PARD6B-202ENST00000396039 NUDCQ9Y266 331 aa29.63■■■□□ 2.33
PARD6B-202ENST00000396039 HEG1Q9ULI3 1381 aa29.63■■■□□ 2.33
PARD6B-202ENST00000396039 CNGB1Q14028 1251 aaPredicted RBP29.62■■■□□ 2.33
PARD6B-202ENST00000396039 CANXP27824 592 aaKnown RBP29.61■■■□□ 2.33
PARD6B-202ENST00000396039 CHRNA5P30532 468 aa29.61■■■□□ 2.33
PARD6B-202ENST00000396039 C9orf131Q5VYM1 1079 aa29.61■■■□□ 2.33
PARD6B-202ENST00000396039 TOMM70O94826 608 aa29.6■■■□□ 2.33
PARD6B-202ENST00000396039 IL17REQ8NFR9 667 aa29.6■■■□□ 2.33
PARD6B-202ENST00000396039 CEMIPQ8WUJ3 1361 aa29.6■■■□□ 2.33
PARD6B-202ENST00000396039 EIF5P55010 431 aaKnown RBP29.59■■■□□ 2.33
PARD6B-202ENST00000396039 NPM2Q86SE8 214 aaKnown RBP29.59■■■□□ 2.33
PARD6B-202ENST00000396039 FMNL2Q96PY5 1086 aa29.59■■■□□ 2.33
PARD6B-202ENST00000396039 SERPINB2P05120 415 aa29.58■■■□□ 2.33
PARD6B-202ENST00000396039 ZNF496Q96IT1 587 aaPredicted RBP29.58■■■□□ 2.33
PARD6B-202ENST00000396039 TNRC6CQ9HCJ0 1690 aaKnown RBP29.58■■■□□ 2.33
PARD6B-202ENST00000396039 KDM2BQ8NHM5 1336 aa29.57■■■□□ 2.32
PARD6B-202ENST00000396039 BCL2L12Q9HB09 334 aa29.57■■■□□ 2.32
PARD6B-202ENST00000396039 ZC3H4Q9UPT8 1303 aaKnown RBP29.56■■■□□ 2.32
PARD6B-202ENST00000396039 PRKAR2BP31323 418 aa29.56■■■□□ 2.32
PARD6B-202ENST00000396039 RNF181Q9P0P0 153 aa29.56■■■□□ 2.32
PARD6B-202ENST00000396039 PDZRN3Q9UPQ7 1066 aa29.56■■■□□ 2.32
PARD6B-202ENST00000396039 IL6STP40189 918 aaPredicted RBP29.55■■■□□ 2.32
PARD6B-202ENST00000396039 RSPH6AQ9H0K4 717 aa29.55■■■□□ 2.32
PARD6B-202ENST00000396039 C16orf71Q8IYS4 520 aaPredicted RBP29.54■■■□□ 2.32
PARD6B-202ENST00000396039 BTBD11A6QL63 1104 aa29.53■■■□□ 2.32
PARD6B-202ENST00000396039 APLP1P51693 650 aa29.53■■■□□ 2.32
PARD6B-202ENST00000396039 BCORQ6W2J9 1755 aa29.52■■■□□ 2.32
PARD6B-202ENST00000396039 TTLL6Q8N841 843 aa29.52■■■□□ 2.32
PARD6B-202ENST00000396039 RTF1Q92541 710 aaKnown RBP29.52■■■□□ 2.32
PARD6B-202ENST00000396039 CARMIL3Q8ND23 1372 aa29.52■■■□□ 2.32
PARD6B-202ENST00000396039 H0YIN7 160 aa29.51■■■□□ 2.31
PARD6B-202ENST00000396039 NMRK2Q9NPI5 230 aa29.51■■■□□ 2.31
PARD6B-202ENST00000396039 ANKRD31Q8N7Z5 1873 aa29.51■■■□□ 2.31
PARD6B-202ENST00000396039 RBM46Q8TBY0 533 aaKnown RBP29.5■■■□□ 2.31
PARD6B-202ENST00000396039 CCDC88AQ3V6T2 1871 aa29.49■■■□□ 2.31
PARD6B-202ENST00000396039 U2AF1L5P0DN76 240 aaPredicted RBP29.49■■■□□ 2.31
PARD6B-202ENST00000396039 U2AF1Q01081 240 aaKnown RBP eCLIP29.49■■■□□ 2.31
PARD6B-202ENST00000396039 C2CD5Q86YS7 1000 aa29.49■■■□□ 2.31
PARD6B-202ENST00000396039 PHACTR3Q96KR7 559 aa29.49■■■□□ 2.31
PARD6B-202ENST00000396039 ZNF330Q9Y3S2 320 aaPredicted RBP29.49■■■□□ 2.31
PARD6B-202ENST00000396039 PPP2R1AP30153 589 aa29.48■■■□□ 2.31
PARD6B-202ENST00000396039 BICDL1Q6ZP65 573 aa29.48■■■□□ 2.31
PARD6B-202ENST00000396039 PDE6BP35913 854 aa29.47■■■□□ 2.31
PARD6B-202ENST00000396039 TIAM2Q8IVF5 1701 aa29.46■■■□□ 2.31
PARD6B-202ENST00000396039 HTATSF1O43719 755 aaKnown RBP29.46■■■□□ 2.31
PARD6B-202ENST00000396039 LMNB1P20700 586 aa29.46■■■□□ 2.31
PARD6B-202ENST00000396039 TBC1D9BQ66K14 1250 aa29.46■■■□□ 2.31
PARD6B-202ENST00000396039 BRIP1Q9BX63 1249 aa29.45■■■□□ 2.31
PARD6B-202ENST00000396039 TBC1D2BQ9UPU7 963 aa29.45■■■□□ 2.31
PARD6B-202ENST00000396039 FSTL1Q12841 308 aa29.44■■■□□ 2.3
PARD6B-202ENST00000396039 WDR90Q96KV7 1748 aa29.44■■■□□ 2.3
PARD6B-202ENST00000396039 COL11A2P13942 1736 aaPredicted RBP29.43■■■□□ 2.3
PARD6B-202ENST00000396039 A1BGP04217 495 aa29.43■■■□□ 2.3
PARD6B-202ENST00000396039 NEFMP07197 916 aa29.43■■■□□ 2.3
PARD6B-202ENST00000396039 SETDB2Q96T68 719 aa29.43■■■□□ 2.3
PARD6B-202ENST00000396039 NPHP1O15259 732 aa29.42■■■□□ 2.3
PARD6B-202ENST00000396039 SNRPA1P09661 255 aaKnown RBP29.42■■■□□ 2.3
PARD6B-202ENST00000396039 RASSF7Q02833 373 aa29.42■■■□□ 2.3
PARD6B-202ENST00000396039 ARFGEF2Q9Y6D5 1785 aa29.41■■■□□ 2.3
PARD6B-202ENST00000396039 DICER1Q9UPY3 1922 aaKnown RBP29.41■■■□□ 2.3
PARD6B-202ENST00000396039 DZIP3Q86Y13 1208 aaKnown RBP29.41■■■□□ 2.3
PARD6B-202ENST00000396039 CNBD1Q8NA66 436 aa29.41■■■□□ 2.3
PARD6B-202ENST00000396039 FER1L6Q2WGJ9 1857 aa29.4■■■□□ 2.3
PARD6B-202ENST00000396039 LAMB4A4D0S4 1761 aa29.4■■■□□ 2.3
PARD6B-202ENST00000396039 CAMTA2O94983 1202 aa29.4■■■□□ 2.3
PARD6B-202ENST00000396039 ST5P78524 1137 aa29.4■■■□□ 2.3
PARD6B-202ENST00000396039 PRR5LQ6MZQ0 368 aa29.4■■■□□ 2.3
PARD6B-202ENST00000396039 ZNF652Q9Y2D9 606 aa29.4■■■□□ 2.3
PARD6B-202ENST00000396039 CLEC4GQ6UXB4 293 aa29.39■■■□□ 2.3
PARD6B-202ENST00000396039 CACNA1SQ13698 1873 aa29.38■■■□□ 2.29
PARD6B-202ENST00000396039 DLG5Q8TDM6 1919 aa29.38■■■□□ 2.29
PARD6B-202ENST00000396039 RGL2O15211 777 aa29.38■■■□□ 2.29
PARD6B-202ENST00000396039 KCNQ3O43525 872 aa29.38■■■□□ 2.29
PARD6B-202ENST00000396039 ZNF622Q969S3 477 aaKnown RBP eCLIP29.38■■■□□ 2.29
PARD6B-202ENST00000396039 MCM10Q7L590 875 aa29.37■■■□□ 2.29
PARD6B-202ENST00000396039 RRAGCQ9HB90 399 aa29.37■■■□□ 2.29
PARD6B-202ENST00000396039 USP16Q9Y5T5 823 aa29.36■■■□□ 2.29
PARD6B-202ENST00000396039 GLTPD2A6NH11 291 aa29.35■■■□□ 2.29
PARD6B-202ENST00000396039 CNKSR1Q969H4 720 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms