RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 MBD3O95983 291 aa14.01□□□□□ -0.17
ATP2A1-202ENST00000395503 CASTP20810 708 aaKnown RBP14.01□□□□□ -0.17
ATP2A1-202ENST00000395503 MCM2P49736 904 aa14.01□□□□□ -0.17
ATP2A1-202ENST00000395503 AK2P54819 239 aa14.01□□□□□ -0.17
ATP2A1-202ENST00000395503 CCDC83Q8IWF9 413 aa14.01□□□□□ -0.17
ATP2A1-202ENST00000395503 C17orf53Q8N3J3 647 aaPredicted RBP14.01□□□□□ -0.17
ATP2A1-202ENST00000395503 SIRT1Q96EB6 747 aa14.01□□□□□ -0.17
ATP2A1-202ENST00000395503 NRXN3Q9Y4C0 1643 aa14.01□□□□□ -0.17
ATP2A1-202ENST00000395503 USP25Q9UHP3 1055 aa14.01□□□□□ -0.17
ATP2A1-202ENST00000395503 DIAPH3Q9NSV4 1193 aa14□□□□□ -0.17
ATP2A1-202ENST00000395503 CCDC9Q9Y3X0 531 aaKnown RBP14□□□□□ -0.17
ATP2A1-202ENST00000395503 SNX14Q9Y5W7 946 aa14□□□□□ -0.17
ATP2A1-202ENST00000395503 ADAMTS13Q76LX8 1427 aa14□□□□□ -0.17
ATP2A1-202ENST00000395503 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
ATP2A1-202ENST00000395503 VPS37CA5D8V6 355 aaPredicted RBP14□□□□□ -0.17
ATP2A1-202ENST00000395503 LARGE1O95461 756 aa14□□□□□ -0.17
ATP2A1-202ENST00000395503 KCNA6P17658 529 aa14□□□□□ -0.17
ATP2A1-202ENST00000395503 TEFQ10587 303 aa14□□□□□ -0.17
ATP2A1-202ENST00000395503 CUL4AQ13619 759 aa14□□□□□ -0.17
ATP2A1-202ENST00000395503 PRPF40BQ6NWY9 871 aaKnown RBP14□□□□□ -0.17
ATP2A1-202ENST00000395503 NECAB1Q8N987 351 aa14□□□□□ -0.17
ATP2A1-202ENST00000395503 SIL1Q9H173 461 aa14□□□□□ -0.17
ATP2A1-202ENST00000395503 C9orf78Q9NZ63 289 aaPredicted RBP14□□□□□ -0.17
ATP2A1-202ENST00000395503 SPATA31D1Q6ZQQ2 1576 aa13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 PEAK1Q9H792 1746 aa13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 CWF19L2Q2TBE0 894 aaKnown RBP13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 JARID2Q92833 1246 aaPredicted RBP13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 NOL7Q9UMY1 257 aaKnown RBP13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 PTPRUQ92729 1446 aa13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 HCLS1P14317 486 aaPredicted RBP13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 GLIPR1L2Q4G1C9 344 aa13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 NBPF6Q5VWK0 638 aa13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 FERMT3Q86UX7 667 aa13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 NBPF4Q96M43 638 aa13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 JAKMIP1Q96N16 626 aaKnown RBP13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 SMC3Q9UQE7 1217 aa13.99□□□□□ -0.17
ATP2A1-202ENST00000395503 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 RRP9O43818 475 aaKnown RBP13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 SSH3Q8TE77 659 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 WDR33Q9C0J8 1336 aaKnown RBP13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 SETD1BQ9UPS6 1966 aaKnown RBP13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 HSPA4P34932 840 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 PTH1RQ03431 593 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 ADCK5Q3MIX3 580 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 CNTROBQ8N137 903 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 PI4K2BQ8TCG2 481 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 DNAAF4Q8WXU2 420 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 STAP2Q9UGK3 403 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 MAP3K5Q99683 1374 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 FAM173BQ6P4H8 233 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 RUFY3Q7L099 469 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 ZKSCAN5Q9Y2L8 839 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 USP31Q70CQ4 1352 aa13.98□□□□□ -0.17
ATP2A1-202ENST00000395503 TTC21AQ8NDW8 1320 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 UQCRHLA0A096LP55 91 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 SGSM2O43147 1006 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 UQCRHP07919 91 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 TPM2P07951 284 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 SYT1P21579 422 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 PROSER3Q2NL68 480 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 GIMAP6Q6P9H5 292 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 KIF1BPQ96EK5 621 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 CCDC8Q9H0W5 538 aaPredicted RBP13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 C3P01024 1663 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 BTBD11A6QL63 1104 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 ANAPC15P60006 121 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 COL9A3Q14050 684 aaPredicted RBP13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 ZNF530Q6P9A1 599 aaPredicted RBP13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 TSC1Q92574 1164 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 SYAP1Q96A49 352 aaPredicted RBP13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 TTC12Q9H892 705 aaPredicted RBP13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 PDLIM2Q96JY6 352 aa13.97□□□□□ -0.17
ATP2A1-202ENST00000395503 SETD1AO15047 1707 aaKnown RBP13.96□□□□□ -0.17
ATP2A1-202ENST00000395503 KLHDC4Q8TBB5 520 aa13.96□□□□□ -0.17
ATP2A1-202ENST00000395503 FAM177BA6PVY3 158 aa13.96□□□□□ -0.17
ATP2A1-202ENST00000395503 IFIT2P09913 472 aaKnown RBP13.96□□□□□ -0.17
ATP2A1-202ENST00000395503 INTS4Q96HW7 963 aaKnown RBP13.96□□□□□ -0.17
ATP2A1-202ENST00000395503 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.96□□□□□ -0.17
ATP2A1-202ENST00000395503 ITSN1Q15811 1721 aa13.96□□□□□ -0.18
ATP2A1-202ENST00000395503 MON2Q7Z3U7 1717 aa13.96□□□□□ -0.18
ATP2A1-202ENST00000395503 STX6O43752 255 aa13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 DNM1Q05193 864 aaKnown RBP13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 AACSQ86V21 672 aa13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 CCDC39Q9UFE4 941 aa13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 MAP3K2Q9Y2U5 619 aa13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 TECPR2O15040 1411 aa13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 PIP4K2AP48426 406 aaPredicted RBP13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 CLASRPQ8N2M8 674 aaKnown RBP13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 LSG1Q9H089 658 aaKnown RBP13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 GJB2P29033 226 aa13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 EIF4A1P60842 406 aaKnown RBP13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 STK3Q13188 491 aa13.95□□□□□ -0.18
ATP2A1-202ENST00000395503 ZSCAN22P10073 491 aaPredicted RBP13.94□□□□□ -0.18
ATP2A1-202ENST00000395503 ESCO1Q5FWF5 840 aa13.94□□□□□ -0.18
ATP2A1-202ENST00000395503 BEND3Q5T5X7 828 aa13.94□□□□□ -0.18
ATP2A1-202ENST00000395503 LIMCH1Q9UPQ0 1083 aa13.94□□□□□ -0.18
ATP2A1-202ENST00000395503 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.94□□□□□ -0.18
ATP2A1-202ENST00000395503 REREQ9P2R6 1566 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms