RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 CHRNA5P30532 468 aa25.95■■□□□ 1.74
COL11A2-204ENST00000395194 SIPA1L3O60292 1781 aaPredicted RBP25.95■■□□□ 1.74
COL11A2-204ENST00000395194 TM4SF1P30408 202 aa25.93■■□□□ 1.74
COL11A2-204ENST00000395194 TTC5Q8N0Z6 440 aa25.93■■□□□ 1.74
COL11A2-204ENST00000395194 PIM2Q9P1W9 311 aa25.93■■□□□ 1.74
COL11A2-204ENST00000395194 CANXP27824 592 aaKnown RBP25.92■■□□□ 1.74
COL11A2-204ENST00000395194 KIF3CO14782 793 aa25.91■■□□□ 1.74
COL11A2-204ENST00000395194 NARFQ9UHQ1 456 aa25.91■■□□□ 1.74
COL11A2-204ENST00000395194 GNAT3A8MTJ3 354 aa25.9■■□□□ 1.74
COL11A2-204ENST00000395194 TEFQ10587 303 aa25.9■■□□□ 1.74
COL11A2-204ENST00000395194 NFIXQ14938 502 aa25.9■■□□□ 1.74
COL11A2-204ENST00000395194 DALRD3Q5D0E6 543 aaKnown RBP25.9■■□□□ 1.74
COL11A2-204ENST00000395194 IL17REQ8NFR9 667 aa25.9■■□□□ 1.74
COL11A2-204ENST00000395194 GAS2L2Q8NHY3 880 aa25.9■■□□□ 1.74
COL11A2-204ENST00000395194 VSIG10Q8N0Z9 540 aa25.89■■□□□ 1.74
COL11A2-204ENST00000395194 NRXN2Q9P2S2 1712 aa25.88■■□□□ 1.73
COL11A2-204ENST00000395194 ZNF496Q96IT1 587 aaPredicted RBP25.88■■□□□ 1.73
COL11A2-204ENST00000395194 BCL2L12Q9HB09 334 aa25.88■■□□□ 1.73
COL11A2-204ENST00000395194 SBF1O95248 1867 aa25.87■■□□□ 1.73
COL11A2-204ENST00000395194 HSPA6P17066 643 aa25.87■■□□□ 1.73
COL11A2-204ENST00000395194 C9orf131Q5VYM1 1079 aa25.87■■□□□ 1.73
COL11A2-204ENST00000395194 PRKAR2BP31323 418 aa25.86■■□□□ 1.73
COL11A2-204ENST00000395194 BICDL1Q6ZP65 573 aa25.86■■□□□ 1.73
COL11A2-204ENST00000395194 ZNF330Q9Y3S2 320 aaPredicted RBP25.86■■□□□ 1.73
COL11A2-204ENST00000395194 HEG1Q9ULI3 1381 aa25.85■■□□□ 1.73
COL11A2-204ENST00000395194 DLEC1Q9Y238 1755 aa25.85■■□□□ 1.73
COL11A2-204ENST00000395194 STARD3NLO95772 234 aa25.85■■□□□ 1.73
COL11A2-204ENST00000395194 ZNF790Q6PG37 636 aa25.85■■□□□ 1.73
COL11A2-204ENST00000395194 PHACTR3Q96KR7 559 aa25.85■■□□□ 1.73
COL11A2-204ENST00000395194 CFAP53Q96M91 514 aa25.85■■□□□ 1.73
COL11A2-204ENST00000395194 NMRK2Q9NPI5 230 aa25.85■■□□□ 1.73
COL11A2-204ENST00000395194 SERPINB2P05120 415 aa25.84■■□□□ 1.73
COL11A2-204ENST00000395194 SCN7AQ01118 1682 aa25.83■■□□□ 1.73
COL11A2-204ENST00000395194 RSPH6AQ9H0K4 717 aa25.83■■□□□ 1.73
COL11A2-204ENST00000395194 CARMIL3Q8ND23 1372 aa25.82■■□□□ 1.72
COL11A2-204ENST00000395194 EIF5P55010 431 aaKnown RBP25.82■■□□□ 1.72
COL11A2-204ENST00000395194 RNF181Q9P0P0 153 aa25.82■■□□□ 1.72
COL11A2-204ENST00000395194 CCDC88AQ3V6T2 1871 aa25.81■■□□□ 1.72
COL11A2-204ENST00000395194 KCNQ3O43525 872 aa25.81■■□□□ 1.72
COL11A2-204ENST00000395194 ANKRD31Q8N7Z5 1873 aa25.81■■□□□ 1.72
COL11A2-204ENST00000395194 CEMIPQ8WUJ3 1361 aa25.8■■□□□ 1.72
COL11A2-204ENST00000395194 PPP2R1AP30153 589 aa25.79■■□□□ 1.72
COL11A2-204ENST00000395194 RASSF7Q02833 373 aa25.79■■□□□ 1.72
COL11A2-204ENST00000395194 FMNL2Q96PY5 1086 aa25.79■■□□□ 1.72
COL11A2-204ENST00000395194 TBC1D2BQ9UPU7 963 aa25.79■■□□□ 1.72
COL11A2-204ENST00000395194 A0A087WZG4 1122 aa25.78■■□□□ 1.72
COL11A2-204ENST00000395194 BTBD11A6QL63 1104 aa25.78■■□□□ 1.72
COL11A2-204ENST00000395194 A1BGP04217 495 aa25.78■■□□□ 1.72
COL11A2-204ENST00000395194 U2AF1L5P0DN76 240 aaPredicted RBP25.78■■□□□ 1.72
COL11A2-204ENST00000395194 U2AF1Q01081 240 aaKnown RBP eCLIP25.78■■□□□ 1.72
COL11A2-204ENST00000395194 TBC1D9BQ66K14 1250 aa25.78■■□□□ 1.72
COL11A2-204ENST00000395194 NUDCQ9Y266 331 aa25.78■■□□□ 1.72
COL11A2-204ENST00000395194 C2CD5Q86YS7 1000 aa25.77■■□□□ 1.72
COL11A2-204ENST00000395194 CCDC24Q8N4L8 307 aa25.76■■□□□ 1.71
COL11A2-204ENST00000395194 TEX13AQ9BXU3 409 aaPredicted RBP25.76■■□□□ 1.71
COL11A2-204ENST00000395194 COL11A2P13942 1736 aaPredicted RBP25.76■■□□□ 1.71
COL11A2-204ENST00000395194 CACNA1SQ13698 1873 aa25.76■■□□□ 1.71
COL11A2-204ENST00000395194 BCORQ6W2J9 1755 aa25.75■■□□□ 1.71
COL11A2-204ENST00000395194 TOMM70O94826 608 aa25.75■■□□□ 1.71
COL11A2-204ENST00000395194 PIP4K2AP48426 406 aaPredicted RBP25.75■■□□□ 1.71
COL11A2-204ENST00000395194 MCM10Q7L590 875 aa25.75■■□□□ 1.71
COL11A2-204ENST00000395194 PRAMEF22A3QJZ6 481 aa25.73■■□□□ 1.71
COL11A2-204ENST00000395194 IL6STP40189 918 aaPredicted RBP25.73■■□□□ 1.71
COL11A2-204ENST00000395194 TTLL6Q8N841 843 aa25.73■■□□□ 1.71
COL11A2-204ENST00000395194 TIAM2Q8IVF5 1701 aa25.72■■□□□ 1.71
COL11A2-204ENST00000395194 TNRC6CQ9HCJ0 1690 aaKnown RBP25.72■■□□□ 1.71
COL11A2-204ENST00000395194 H0YIN7 160 aa25.72■■□□□ 1.71
COL11A2-204ENST00000395194 DCTN1Q14203 1278 aa25.72■■□□□ 1.71
COL11A2-204ENST00000395194 NPM2Q86SE8 214 aaKnown RBP25.72■■□□□ 1.71
COL11A2-204ENST00000395194 DLG5Q8TDM6 1919 aa25.71■■□□□ 1.71
COL11A2-204ENST00000395194 C16orf71Q8IYS4 520 aaPredicted RBP25.71■■□□□ 1.71
COL11A2-204ENST00000395194 RTF1Q92541 710 aaKnown RBP25.71■■□□□ 1.71
COL11A2-204ENST00000395194 KDM2BQ8NHM5 1336 aa25.7■■□□□ 1.71
COL11A2-204ENST00000395194 PRELPP51888 382 aa25.7■■□□□ 1.7
COL11A2-204ENST00000395194 ZNF219Q9P2Y4 722 aaPredicted RBP25.7■■□□□ 1.7
COL11A2-204ENST00000395194 USP16Q9Y5T5 823 aa25.7■■□□□ 1.7
COL11A2-204ENST00000395194 CAMTA2O94983 1202 aa25.69■■□□□ 1.7
COL11A2-204ENST00000395194 PRR5LQ6MZQ0 368 aa25.69■■□□□ 1.7
COL11A2-204ENST00000395194 ZNF622Q969S3 477 aaKnown RBP eCLIP25.69■■□□□ 1.7
COL11A2-204ENST00000395194 RRAGCQ9HB90 399 aa25.69■■□□□ 1.7
COL11A2-204ENST00000395194 DZIP3Q86Y13 1208 aaKnown RBP25.68■■□□□ 1.7
COL11A2-204ENST00000395194 WDR90Q96KV7 1748 aa25.68■■□□□ 1.7
COL11A2-204ENST00000395194 NPHP1O15259 732 aa25.67■■□□□ 1.7
COL11A2-204ENST00000395194 APLP1P51693 650 aa25.67■■□□□ 1.7
COL11A2-204ENST00000395194 LMNB1P20700 586 aa25.66■■□□□ 1.7
COL11A2-204ENST00000395194 RBM46Q8TBY0 533 aaKnown RBP25.66■■□□□ 1.7
COL11A2-204ENST00000395194 SETDB2Q96T68 719 aa25.66■■□□□ 1.7
COL11A2-204ENST00000395194 NFKBIEO00221 500 aa25.65■■□□□ 1.7
COL11A2-204ENST00000395194 CNBD1Q8NA66 436 aa25.65■■□□□ 1.7
COL11A2-204ENST00000395194 FER1L6Q2WGJ9 1857 aa25.64■■□□□ 1.7
COL11A2-204ENST00000395194 PDE6BP35913 854 aa25.64■■□□□ 1.7
COL11A2-204ENST00000395194 BRIP1Q9BX63 1249 aa25.64■■□□□ 1.7
COL11A2-204ENST00000395194 SLX4Q8IY92 1834 aa25.64■■□□□ 1.7
COL11A2-204ENST00000395194 C21orf2O43822 256 aa25.63■■□□□ 1.69
COL11A2-204ENST00000395194 SNRPA1P09661 255 aaKnown RBP25.63■■□□□ 1.69
COL11A2-204ENST00000395194 MIS18AQ9NYP9 233 aa25.63■■□□□ 1.69
COL11A2-204ENST00000395194 DICER1Q9UPY3 1922 aaKnown RBP25.63■■□□□ 1.69
COL11A2-204ENST00000395194 HTRA3P83110 453 aa25.62■■□□□ 1.69
COL11A2-204ENST00000395194 LAMB4A4D0S4 1761 aa25.61■■□□□ 1.69
COL11A2-204ENST00000395194 ST5P78524 1137 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms