RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 PXDNQ92626 1479 aa15.13■□□□□ 0.01
RTN1-203ENST00000395090 MARF1Q9Y4F3 1742 aaKnown RBP15.13■□□□□ 0.01
RTN1-203ENST00000395090 SOS2Q07890 1332 aaPredicted RBP15.13■□□□□ 0.01
RTN1-203ENST00000395090 SH3D19Q5HYK7 790 aa15.13■□□□□ 0.01
RTN1-203ENST00000395090 CDK12Q9NYV4 1490 aaPredicted RBP15.12■□□□□ 0.01
RTN1-203ENST00000395090 DIAPH1O60610 1272 aaKnown RBP15.12■□□□□ 0.01
RTN1-203ENST00000395090 KCNH5Q8NCM2 988 aa15.12■□□□□ 0.01
RTN1-203ENST00000395090 SEPT9Q9UHD8 586 aaPredicted RBP15.12■□□□□ 0.01
RTN1-203ENST00000395090 NUDCQ9Y266 331 aa15.12■□□□□ 0.01
RTN1-203ENST00000395090 KIF24Q5T7B8 1368 aa15.12■□□□□ 0.01
RTN1-203ENST00000395090 SHPRHQ149N8 1683 aa15.12■□□□□ 0.01
RTN1-203ENST00000395090 USP19O94966 1318 aa15.12■□□□□ 0.01
RTN1-203ENST00000395090 SPATA31A3Q5VYP0 1347 aa15.12■□□□□ 0.01
RTN1-203ENST00000395090 DDX11L8A8MPP1 907 aa15.11■□□□□ 0.01
RTN1-203ENST00000395090 PPM1GO15355 546 aaPredicted RBP15.11■□□□□ 0.01
RTN1-203ENST00000395090 MAP3K19Q56UN5 1328 aa15.11■□□□□ 0.01
RTN1-203ENST00000395090 ZBED9Q6R2W3 1325 aa15.11■□□□□ 0.01
RTN1-203ENST00000395090 IL13P35225 146 aa15.1■□□□□ 0.01
RTN1-203ENST00000395090 GCP02774 474 aa15.1■□□□□ 0.01
RTN1-203ENST00000395090 PCMTD1Q96MG8 357 aaPredicted RBP15.1■□□□□ 0.01
RTN1-203ENST00000395090 ALS2Q96Q42 1657 aa15.09■□□□□ 0.01
RTN1-203ENST00000395090 CD46P15529 392 aa15.09■□□□□ 0.01
RTN1-203ENST00000395090 TNS3Q68CZ2 1445 aa15.09■□□□□ 0.01
RTN1-203ENST00000395090 SLIT3O75094 1523 aa15.08■□□□□ 0
RTN1-203ENST00000395090 U2AF1L5P0DN76 240 aaPredicted RBP15.08■□□□□ 0
RTN1-203ENST00000395090 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0
RTN1-203ENST00000395090 NFAT5O94916 1531 aa15.07■□□□□ 0
RTN1-203ENST00000395090 TK2O00142 265 aa15.07■□□□□ 0
RTN1-203ENST00000395090 FAM98CQ17RN3 349 aaKnown RBP15.07■□□□□ 0
RTN1-203ENST00000395090 HSP90AB2PQ58FF8 381 aa15.07■□□□□ 0
RTN1-203ENST00000395090 NBPF3Q9H094 633 aa15.07■□□□□ 0
RTN1-203ENST00000395090 ARHGEF10O15013 1369 aa15.07■□□□□ 0
RTN1-203ENST00000395090 FLT4P35916 1363 aa15.07■□□□□ 0
RTN1-203ENST00000395090 SKIV2LQ15477 1246 aaKnown RBP15.06■□□□□ 0
RTN1-203ENST00000395090 DIXDC1Q155Q3 683 aa15.06■□□□□ 0
RTN1-203ENST00000395090 AMPHP49418 695 aa15.06■□□□□ 0
RTN1-203ENST00000395090 EIF4A2Q14240 407 aaKnown RBP15.06■□□□□ 0
RTN1-203ENST00000395090 ARHGEF25Q86VW2 580 aa15.06■□□□□ 0
RTN1-203ENST00000395090 NGEFQ8N5V2 710 aa15.06■□□□□ 0
RTN1-203ENST00000395090 RUNDC1Q96C34 613 aa15.06■□□□□ 0
RTN1-203ENST00000395090 PEAK1Q9H792 1746 aa15.06■□□□□ 0
RTN1-203ENST00000395090 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ -0
RTN1-203ENST00000395090 TOM1O60784 492 aa15.05■□□□□ -0
RTN1-203ENST00000395090 HOXC9P31274 260 aa15.05■□□□□ -0
RTN1-203ENST00000395090 IP6K1Q92551 441 aa15.05■□□□□ -0
RTN1-203ENST00000395090 PLEKHF1Q96S99 279 aa15.05■□□□□ -0
RTN1-203ENST00000395090 RTL1A6NKG5 1358 aa15.05■□□□□ -0
RTN1-203ENST00000395090 NHSL1Q5SYE7 1610 aa15.05■□□□□ -0
RTN1-203ENST00000395090 LSM11P83369 360 aaKnown RBP eCLIP15.04■□□□□ -0
RTN1-203ENST00000395090 SWT1Q5T5J6 900 aaKnown RBP15.04■□□□□ -0
RTN1-203ENST00000395090 LAPTM4BQ86VI4 370 aa15.04■□□□□ -0
RTN1-203ENST00000395090 CCDC146Q8IYE0 955 aa15.04■□□□□ -0
RTN1-203ENST00000395090 RDH13Q8NBN7 331 aa15.04■□□□□ -0
RTN1-203ENST00000395090 TBC1D2Q9BYX2 928 aa15.04■□□□□ -0
RTN1-203ENST00000395090 PNNQ9H307 717 aaKnown RBP15.04■□□□□ -0
RTN1-203ENST00000395090 IQSEC2Q5JU85 1478 aa15.04■□□□□ -0
RTN1-203ENST00000395090 MED1Q15648 1581 aaPredicted RBP15.03■□□□□ -0
RTN1-203ENST00000395090 APAF1O14727 1248 aa15.03■□□□□ -0
RTN1-203ENST00000395090 MYSM1Q5VVJ2 828 aa15.03■□□□□ -0
RTN1-203ENST00000395090 BHMG1C9JSJ3 638 aaPredicted RBP15.03■□□□□ -0
RTN1-203ENST00000395090 PHRF1Q9P1Y6 1649 aaKnown RBP15.02■□□□□ -0
RTN1-203ENST00000395090 TCP11L2Q8N4U5 519 aa15.01□□□□□ -0.01
RTN1-203ENST00000395090 LRRC59Q96AG4 307 aaKnown RBP15.01□□□□□ -0.01
RTN1-203ENST00000395090 POLR3EQ9NVU0 708 aa15.01□□□□□ -0.01
RTN1-203ENST00000395090 ZNF521Q96K83 1311 aa15.01□□□□□ -0.01
RTN1-203ENST00000395090 ROBO1Q9Y6N7 1651 aa15.01□□□□□ -0.01
RTN1-203ENST00000395090 AHDC1Q5TGY3 1603 aaPredicted RBP15□□□□□ -0.01
RTN1-203ENST00000395090 SLC4A3P48751 1232 aa15□□□□□ -0.01
RTN1-203ENST00000395090 PDE3BQ13370 1112 aa15□□□□□ -0.01
RTN1-203ENST00000395090 ADGRD1Q6QNK2 874 aa15□□□□□ -0.01
RTN1-203ENST00000395090 NUTM1Q86Y26 1132 aa15□□□□□ -0.01
RTN1-203ENST00000395090 SPIRE2Q8WWL2 714 aa15□□□□□ -0.01
RTN1-203ENST00000395090 CABLES1Q8TDN4 633 aa14.99□□□□□ -0.01
RTN1-203ENST00000395090 CPDO75976 1380 aa14.99□□□□□ -0.01
RTN1-203ENST00000395090 SENP3-EIF4A1A0A087X0R7 540 aa14.99□□□□□ -0.01
RTN1-203ENST00000395090 MRPL50Q8N5N7 158 aaKnown RBP14.99□□□□□ -0.01
RTN1-203ENST00000395090 LTN1O94822 1766 aa14.98□□□□□ -0.01
RTN1-203ENST00000395090 HMOX1P09601 288 aa14.98□□□□□ -0.01
RTN1-203ENST00000395090 CLK2P49760 499 aaKnown RBP14.98□□□□□ -0.01
RTN1-203ENST00000395090 CCDC27Q2M243 656 aa14.98□□□□□ -0.01
RTN1-203ENST00000395090 RGPD1P0DJD0 1748 aa14.97□□□□□ -0.01
RTN1-203ENST00000395090 CRYBG1Q9Y4K1 1723 aa14.97□□□□□ -0.01
RTN1-203ENST00000395090 IGSF1Q8N6C5 1336 aa14.97□□□□□ -0.01
RTN1-203ENST00000395090 PRKAR2BP31323 418 aa14.97□□□□□ -0.01
RTN1-203ENST00000395090 ZC3H6P61129 1189 aaKnown RBP14.97□□□□□ -0.01
RTN1-203ENST00000395090 SAMD7Q7Z3H4 446 aa14.97□□□□□ -0.01
RTN1-203ENST00000395090 PROCA1Q8NCQ7 364 aaPredicted RBP14.97□□□□□ -0.01
RTN1-203ENST00000395090 SALL2Q9Y467 1007 aaPredicted RBP14.97□□□□□ -0.01
RTN1-203ENST00000395090 KDRP35968 1356 aa14.97□□□□□ -0.01
RTN1-203ENST00000395090 UBAP1LF5GYI3 381 aa14.96□□□□□ -0.01
RTN1-203ENST00000395090 SULT6B1Q6IMI4 303 aa14.96□□□□□ -0.01
RTN1-203ENST00000395090 TMPOP42166 694 aaKnown RBP14.95□□□□□ -0.02
RTN1-203ENST00000395090 WWC1Q8IX03 1113 aa14.95□□□□□ -0.02
RTN1-203ENST00000395090 SLF2Q8IX21 1173 aa14.95□□□□□ -0.02
RTN1-203ENST00000395090 ZFRQ96KR1 1074 aaKnown RBP14.95□□□□□ -0.02
RTN1-203ENST00000395090 PHACTR3Q96KR7 559 aa14.95□□□□□ -0.02
RTN1-203ENST00000395090 SLC10A3P09131 477 aa14.95□□□□□ -0.02
RTN1-203ENST00000395090 AEBP1Q8IUX7 1158 aa14.95□□□□□ -0.02
RTN1-203ENST00000395090 ABCC6O95255 1503 aa14.94□□□□□ -0.02
RTN1-203ENST00000395090 MAPK8IP3Q9UPT6 1336 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms