RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 DBF4Q9UBU7 674 aaPredicted RBP17.22■□□□□ 0.35
SNCA-204ENST00000394989 DDIT3P35638 169 aa17.22■□□□□ 0.35
SNCA-204ENST00000394989 USP26Q9BXU7 913 aa17.22■□□□□ 0.35
SNCA-204ENST00000394989 CHRNA2Q15822 529 aa17.21■□□□□ 0.35
SNCA-204ENST00000394989 SPATA31A3Q5VYP0 1347 aa17.21■□□□□ 0.35
SNCA-204ENST00000394989 PPP1R42Q7Z4L9 355 aa17.2■□□□□ 0.34
SNCA-204ENST00000394989 RAPGEF4Q8WZA2 1011 aa17.2■□□□□ 0.34
SNCA-204ENST00000394989 CHMP4AQ9BY43 222 aa17.2■□□□□ 0.34
SNCA-204ENST00000394989 POLA2Q14181 598 aa17.2■□□□□ 0.34
SNCA-204ENST00000394989 C5P01031 1676 aa17.19■□□□□ 0.34
SNCA-204ENST00000394989 PHKG2P15735 406 aa17.19■□□□□ 0.34
SNCA-204ENST00000394989 MX1P20591 662 aa17.19■□□□□ 0.34
SNCA-204ENST00000394989 ABCC6O95255 1503 aa17.19■□□□□ 0.34
SNCA-204ENST00000394989 SLC39A6Q13433 755 aa17.18■□□□□ 0.34
SNCA-204ENST00000394989 SLC52A2Q9HAB3 445 aa17.18■□□□□ 0.34
SNCA-204ENST00000394989 CHMP5Q9NZZ3 219 aa17.18■□□□□ 0.34
SNCA-204ENST00000394989 MAP3K2Q9Y2U5 619 aa17.18■□□□□ 0.34
SNCA-204ENST00000394989 PDIA6Q15084 440 aa17.18■□□□□ 0.34
SNCA-204ENST00000394989 STRCQ7RTU9 1775 aa17.17■□□□□ 0.34
SNCA-204ENST00000394989 TATP17735 454 aaPredicted RBP17.17■□□□□ 0.34
SNCA-204ENST00000394989 ZNF790Q6PG37 636 aa17.17■□□□□ 0.34
SNCA-204ENST00000394989 PKD1L3Q7Z443 1732 aa17.17■□□□□ 0.34
SNCA-204ENST00000394989 BRINP3Q76B58 766 aa17.17■□□□□ 0.34
SNCA-204ENST00000394989 NFATC2IPQ8NCF5 419 aa17.17■□□□□ 0.34
SNCA-204ENST00000394989 STAP2Q9UGK3 403 aa17.17■□□□□ 0.34
SNCA-204ENST00000394989 SRGAP3O43295 1099 aa17.16■□□□□ 0.34
SNCA-204ENST00000394989 IL1RAPL2Q9NP60 686 aa17.16■□□□□ 0.34
SNCA-204ENST00000394989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNCA-204ENST00000394989 CPDO75976 1380 aa17.16■□□□□ 0.34
SNCA-204ENST00000394989 CASC1Q6TDU7 716 aa17.16■□□□□ 0.34
SNCA-204ENST00000394989 CYP27B1O15528 508 aa17.16■□□□□ 0.34
SNCA-204ENST00000394989 CSB-PGBD3P0DP91 1061 aa17.16■□□□□ 0.34
SNCA-204ENST00000394989 KSR2Q6VAB6 950 aa17.16■□□□□ 0.34
SNCA-204ENST00000394989 K7ELQ4 463 aaPredicted RBP17.15■□□□□ 0.34
SNCA-204ENST00000394989 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
SNCA-204ENST00000394989 SURF6O75683 361 aaKnown RBP17.15■□□□□ 0.34
SNCA-204ENST00000394989 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
SNCA-204ENST00000394989 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
SNCA-204ENST00000394989 MRC1P22897 1456 aa17.14■□□□□ 0.34
SNCA-204ENST00000394989 UNC5CLQ8IV45 518 aa17.14■□□□□ 0.33
SNCA-204ENST00000394989 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
SNCA-204ENST00000394989 GZF1Q9H116 711 aaPredicted RBP17.14■□□□□ 0.33
SNCA-204ENST00000394989 DDX21Q9NR30 783 aaKnown RBP eCLIP17.14■□□□□ 0.33
SNCA-204ENST00000394989 HYPKQ9NX55 129 aa17.14■□□□□ 0.33
SNCA-204ENST00000394989 ERC2O15083 957 aa17.14■□□□□ 0.33
SNCA-204ENST00000394989 RHPN1Q8TCX5 695 aa17.13■□□□□ 0.33
SNCA-204ENST00000394989 RAB11FIP3O75154 756 aa17.13■□□□□ 0.33
SNCA-204ENST00000394989 RABEP1Q15276 862 aa17.13■□□□□ 0.33
SNCA-204ENST00000394989 NUTM1Q86Y26 1132 aa17.13■□□□□ 0.33
SNCA-204ENST00000394989 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
SNCA-204ENST00000394989 MTX1Q13505 466 aa17.12■□□□□ 0.33
SNCA-204ENST00000394989 PLEKHG2Q9H7P9 1386 aa17.12■□□□□ 0.33
SNCA-204ENST00000394989 REC8O95072 547 aa17.12■□□□□ 0.33
SNCA-204ENST00000394989 ZNF496Q96IT1 587 aaPredicted RBP17.12■□□□□ 0.33
SNCA-204ENST00000394989 MCM4P33991 863 aa17.12■□□□□ 0.33
SNCA-204ENST00000394989 NAP1L5Q96NT1 182 aaPredicted RBP17.12■□□□□ 0.33
SNCA-204ENST00000394989 AIMP1Q12904 312 aaKnown RBP17.11■□□□□ 0.33
SNCA-204ENST00000394989 DCAF5Q96JK2 942 aa17.11■□□□□ 0.33
SNCA-204ENST00000394989 ESYT1Q9BSJ8 1104 aa17.11■□□□□ 0.33
SNCA-204ENST00000394989 RRAGDQ9NQL2 400 aaPredicted RBP17.11■□□□□ 0.33
SNCA-204ENST00000394989 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
SNCA-204ENST00000394989 AOX1Q06278 1338 aa17.11■□□□□ 0.33
SNCA-204ENST00000394989 CHMLP26374 656 aa17.1■□□□□ 0.33
SNCA-204ENST00000394989 VSIG10Q8N0Z9 540 aa17.1■□□□□ 0.33
SNCA-204ENST00000394989 PI4K2BQ8TCG2 481 aa17.1■□□□□ 0.33
SNCA-204ENST00000394989 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
SNCA-204ENST00000394989 GLI3P10071 1580 aa17.1■□□□□ 0.33
SNCA-204ENST00000394989 TRIM6-TRIM34B2RNG4 842 aa17.1■□□□□ 0.33
SNCA-204ENST00000394989 RILPL2Q969X0 211 aa17.1■□□□□ 0.33
SNCA-204ENST00000394989 KIF1BPQ96EK5 621 aa17.1■□□□□ 0.33
SNCA-204ENST00000394989 KAZALD1Q96I82 304 aa17.1■□□□□ 0.33
SNCA-204ENST00000394989 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
SNCA-204ENST00000394989 LINS1Q8NG48 757 aa17.1■□□□□ 0.33
SNCA-204ENST00000394989 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
SNCA-204ENST00000394989 UTYO14607 1347 aa17.09■□□□□ 0.33
SNCA-204ENST00000394989 SOS2Q07890 1332 aaPredicted RBP17.09■□□□□ 0.33
SNCA-204ENST00000394989 IGKV5-2P06315 115 aa17.09■□□□□ 0.33
SNCA-204ENST00000394989 MYL6BP14649 208 aa17.09■□□□□ 0.33
SNCA-204ENST00000394989 IL25Q9H293 177 aa17.09■□□□□ 0.33
SNCA-204ENST00000394989 PARP4Q9UKK3 1724 aaKnown RBP17.08■□□□□ 0.33
SNCA-204ENST00000394989 KDM4FA0A1W2PPD8 638 aa17.08■□□□□ 0.32
SNCA-204ENST00000394989 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
SNCA-204ENST00000394989 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
SNCA-204ENST00000394989 GRM8O00222 908 aa17.08■□□□□ 0.32
SNCA-204ENST00000394989 FAM43AQ8N2R8 423 aa17.08■□□□□ 0.32
SNCA-204ENST00000394989 PKNOX2Q96KN3 472 aa17.08■□□□□ 0.32
SNCA-204ENST00000394989 SLAIN2Q9P270 581 aa17.08■□□□□ 0.32
SNCA-204ENST00000394989 RAB3GAP1Q15042 981 aa17.07■□□□□ 0.32
SNCA-204ENST00000394989 TNPO1Q92973 898 aaKnown RBP17.07■□□□□ 0.32
SNCA-204ENST00000394989 SUCLG2Q96I99 432 aa17.07■□□□□ 0.32
SNCA-204ENST00000394989 DDX58O95786 925 aaKnown RBP17.07■□□□□ 0.32
SNCA-204ENST00000394989 ABCA3Q99758 1704 aa17.07■□□□□ 0.32
SNCA-204ENST00000394989 PA2G4Q9UQ80 394 aaKnown RBP17.07■□□□□ 0.32
SNCA-204ENST00000394989 AK9Q5TCS8 1911 aa17.07■□□□□ 0.32
SNCA-204ENST00000394989 HSP90AA1P07900 732 aaKnown RBP17.06■□□□□ 0.32
SNCA-204ENST00000394989 PIP4K2AP48426 406 aaPredicted RBP17.06■□□□□ 0.32
SNCA-204ENST00000394989 WDR17Q8IZU2 1322 aa17.06■□□□□ 0.32
SNCA-204ENST00000394989 MAP4K4O95819 1239 aaPredicted RBP17.06■□□□□ 0.32
SNCA-204ENST00000394989 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
SNCA-204ENST00000394989 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms