RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 RHPN1Q8TCX5 695 aa19.37■□□□□ 0.69
SMARCD1-202ENST00000394963 FOSBP53539 338 aa19.37■□□□□ 0.69
SMARCD1-202ENST00000394963 CDC42BPGQ6DT37 1551 aa19.37■□□□□ 0.69
SMARCD1-202ENST00000394963 ATP8B2P98198 1209 aa19.36■□□□□ 0.69
SMARCD1-202ENST00000394963 FMNL2Q96PY5 1086 aa19.36■□□□□ 0.69
SMARCD1-202ENST00000394963 DLC1Q96QB1 1528 aa19.36■□□□□ 0.69
SMARCD1-202ENST00000394963 HTATSF1O43719 755 aaKnown RBP19.36■□□□□ 0.69
SMARCD1-202ENST00000394963 GIGYF1O75420 1035 aaPredicted RBP19.36■□□□□ 0.69
SMARCD1-202ENST00000394963 ERBB3P21860 1342 aa19.35■□□□□ 0.69
SMARCD1-202ENST00000394963 PPFIA3O75145 1194 aa19.35■□□□□ 0.69
SMARCD1-202ENST00000394963 GTF2E1P29083 439 aaPredicted RBP19.35■□□□□ 0.69
SMARCD1-202ENST00000394963 PLCB2Q00722 1185 aa19.35■□□□□ 0.69
SMARCD1-202ENST00000394963 TMOD3Q9NYL9 352 aa19.35■□□□□ 0.69
SMARCD1-202ENST00000394963 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.35■□□□□ 0.69
SMARCD1-202ENST00000394963 MED14O60244 1454 aa19.34■□□□□ 0.69
SMARCD1-202ENST00000394963 TECPR2O15040 1411 aa19.34■□□□□ 0.69
SMARCD1-202ENST00000394963 MCTP1Q6DN14 999 aa19.33■□□□□ 0.69
SMARCD1-202ENST00000394963 KSR2Q6VAB6 950 aa19.33■□□□□ 0.69
SMARCD1-202ENST00000394963 BRPF3Q9ULD4 1205 aa19.33■□□□□ 0.69
SMARCD1-202ENST00000394963 SNRPA1P09661 255 aaKnown RBP19.33■□□□□ 0.68
SMARCD1-202ENST00000394963 KIF1BPQ96EK5 621 aa19.33■□□□□ 0.68
SMARCD1-202ENST00000394963 TCEANC2Q96MN5 208 aa19.33■□□□□ 0.68
SMARCD1-202ENST00000394963 HYPKQ9NX55 129 aa19.33■□□□□ 0.68
SMARCD1-202ENST00000394963 KDM4AO75164 1064 aa19.32■□□□□ 0.68
SMARCD1-202ENST00000394963 BICC1Q9H694 974 aaKnown RBP19.32■□□□□ 0.68
SMARCD1-202ENST00000394963 BRINP3Q76B58 766 aa19.32■□□□□ 0.68
SMARCD1-202ENST00000394963 GBP4Q96PP9 640 aa19.32■□□□□ 0.68
SMARCD1-202ENST00000394963 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
SMARCD1-202ENST00000394963 BICDL1Q6ZP65 573 aa19.32■□□□□ 0.68
SMARCD1-202ENST00000394963 CNTROBQ8N137 903 aa19.32■□□□□ 0.68
SMARCD1-202ENST00000394963 DIP2AQ14689 1571 aa19.32■□□□□ 0.68
SMARCD1-202ENST00000394963 CEP170BQ9Y4F5 1589 aaPredicted RBP19.31■□□□□ 0.68
SMARCD1-202ENST00000394963 K7ELQ4 463 aaPredicted RBP19.31■□□□□ 0.68
SMARCD1-202ENST00000394963 GRM8O00222 908 aa19.31■□□□□ 0.68
SMARCD1-202ENST00000394963 UNC5CLQ8IV45 518 aa19.31■□□□□ 0.68
SMARCD1-202ENST00000394963 STK11IPQ8N1F8 1099 aa19.31■□□□□ 0.68
SMARCD1-202ENST00000394963 DDX49Q9Y6V7 483 aaKnown RBP19.31■□□□□ 0.68
SMARCD1-202ENST00000394963 CD2BP2O95400 341 aaKnown RBP19.31■□□□□ 0.68
SMARCD1-202ENST00000394963 SLC52A2Q9HAB3 445 aa19.31■□□□□ 0.68
SMARCD1-202ENST00000394963 HDAC5Q9UQL6 1122 aa19.31■□□□□ 0.68
SMARCD1-202ENST00000394963 USP31Q70CQ4 1352 aa19.31■□□□□ 0.68
SMARCD1-202ENST00000394963 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
SMARCD1-202ENST00000394963 CPA1P15085 419 aa19.3■□□□□ 0.68
SMARCD1-202ENST00000394963 PHKG2P15735 406 aa19.3■□□□□ 0.68
SMARCD1-202ENST00000394963 SNRKQ9NRH2 765 aa19.3■□□□□ 0.68
SMARCD1-202ENST00000394963 HSP90AB4PQ58FF6 505 aa19.3■□□□□ 0.68
SMARCD1-202ENST00000394963 AEBP2Q6ZN18 517 aaPredicted RBP19.3■□□□□ 0.68
SMARCD1-202ENST00000394963 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
SMARCD1-202ENST00000394963 SOS1Q07889 1333 aaPredicted RBP19.3■□□□□ 0.68
SMARCD1-202ENST00000394963 CYP27B1O15528 508 aa19.29■□□□□ 0.68
SMARCD1-202ENST00000394963 FKBP4Q02790 459 aaKnown RBP eCLIP19.29■□□□□ 0.68
SMARCD1-202ENST00000394963 KDM4FA0A1W2PPD8 638 aa19.29■□□□□ 0.68
SMARCD1-202ENST00000394963 HSP90B1P14625 803 aaKnown RBP19.29■□□□□ 0.68
SMARCD1-202ENST00000394963 LMBR1LQ6UX01 489 aa19.29■□□□□ 0.68
SMARCD1-202ENST00000394963 SUCLG2Q96I99 432 aa19.29■□□□□ 0.68
SMARCD1-202ENST00000394963 TBC1D2BQ9UPU7 963 aa19.29■□□□□ 0.68
SMARCD1-202ENST00000394963 IL2RBP14784 551 aa19.28■□□□□ 0.68
SMARCD1-202ENST00000394963 STK3Q13188 491 aa19.28■□□□□ 0.68
SMARCD1-202ENST00000394963 IL27Q8NEV9 243 aa19.28■□□□□ 0.68
SMARCD1-202ENST00000394963 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.28■□□□□ 0.68
SMARCD1-202ENST00000394963 ADGRL3Q9HAR2 1447 aa19.28■□□□□ 0.68
SMARCD1-202ENST00000394963 SSFA2P28290 1259 aa19.28■□□□□ 0.68
SMARCD1-202ENST00000394963 CHAMP1Q96JM3 812 aa19.28■□□□□ 0.68
SMARCD1-202ENST00000394963 FER1L4A9Z1Z3 1794 aa19.28■□□□□ 0.68
SMARCD1-202ENST00000394963 KCNQ4P56696 695 aa19.28■□□□□ 0.68
SMARCD1-202ENST00000394963 DDX21Q9NR30 783 aaKnown RBP eCLIP19.27■□□□□ 0.68
SMARCD1-202ENST00000394963 TTLL7Q6ZT98 887 aa19.27■□□□□ 0.68
SMARCD1-202ENST00000394963 DCAF5Q96JK2 942 aa19.27■□□□□ 0.68
SMARCD1-202ENST00000394963 ZNF594Q96JF6 807 aaPredicted RBP19.26■□□□□ 0.67
SMARCD1-202ENST00000394963 TRAK2O60296 914 aa19.26■□□□□ 0.67
SMARCD1-202ENST00000394963 FAM182BQ5T319 152 aa19.26■□□□□ 0.67
SMARCD1-202ENST00000394963 CRB1P82279 1406 aa19.26■□□□□ 0.67
SMARCD1-202ENST00000394963 WASHC4Q2M389 1173 aa19.26■□□□□ 0.67
SMARCD1-202ENST00000394963 PRPF40BQ6NWY9 871 aaKnown RBP19.26■□□□□ 0.67
SMARCD1-202ENST00000394963 PTCH1Q13635 1447 aa19.25■□□□□ 0.67
SMARCD1-202ENST00000394963 EIF5BO60841 1220 aaKnown RBP19.25■□□□□ 0.67
SMARCD1-202ENST00000394963 BEND3Q5T5X7 828 aa19.25■□□□□ 0.67
SMARCD1-202ENST00000394963 EXOC5O00471 708 aa19.25■□□□□ 0.67
SMARCD1-202ENST00000394963 RABEP1Q15276 862 aa19.25■□□□□ 0.67
SMARCD1-202ENST00000394963 ZGPATQ8N5A5 531 aaKnown RBP19.25■□□□□ 0.67
SMARCD1-202ENST00000394963 LINS1Q8NG48 757 aa19.25■□□□□ 0.67
SMARCD1-202ENST00000394963 ANP32BQ92688 251 aaKnown RBP19.25■□□□□ 0.67
SMARCD1-202ENST00000394963 UBR1Q8IWV7 1749 aa19.25■□□□□ 0.67
SMARCD1-202ENST00000394963 DDX46Q7L014 1031 aaKnown RBP19.24■□□□□ 0.67
SMARCD1-202ENST00000394963 FAM89AQ96GI7 184 aa19.24■□□□□ 0.67
SMARCD1-202ENST00000394963 TOMM22Q9NS69 142 aa19.24■□□□□ 0.67
SMARCD1-202ENST00000394963 VPS37CA5D8V6 355 aaPredicted RBP19.23■□□□□ 0.67
SMARCD1-202ENST00000394963 APPP05067 770 aa19.23■□□□□ 0.67
SMARCD1-202ENST00000394963 MCM4P33991 863 aa19.23■□□□□ 0.67
SMARCD1-202ENST00000394963 ASAP1Q9ULH1 1129 aa19.23■□□□□ 0.67
SMARCD1-202ENST00000394963 KIF6Q6ZMV9 814 aa19.23■□□□□ 0.67
SMARCD1-202ENST00000394963 BRPF1P55201 1214 aaPredicted RBP19.23■□□□□ 0.67
SMARCD1-202ENST00000394963 UBAP1LF5GYI3 381 aa19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 TIMM10P62072 90 aa19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 DNAJC10Q8IXB1 793 aa19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 NGLY1Q96IV0 654 aa19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 GDPD2Q9HCC8 539 aa19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 HSP90AB3PQ58FF7 597 aa19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 PRPF40AO75400 957 aaKnown RBP19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 ZKSCAN1P17029 563 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms