RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 DAXXQ9UER7 740 aaPredicted RBP25.31■■□□□ 1.64
PRKCD-202ENST00000394729 PCDH11XQ9BZA7 1347 aa25.31■■□□□ 1.64
PRKCD-202ENST00000394729 PCDH11YQ9BZA8 1340 aa25.31■■□□□ 1.64
PRKCD-202ENST00000394729 BEND3Q5T5X7 828 aa25.31■■□□□ 1.64
PRKCD-202ENST00000394729 VIRMAQ69YN4 1812 aaKnown RBP25.3■■□□□ 1.64
PRKCD-202ENST00000394729 ATP5J2-PTCD1G3V325 749 aa25.3■■□□□ 1.64
PRKCD-202ENST00000394729 SRGAP3O43295 1099 aa25.3■■□□□ 1.64
PRKCD-202ENST00000394729 MYT1Q01538 1121 aa25.3■■□□□ 1.64
PRKCD-202ENST00000394729 PDIA6Q15084 440 aa25.3■■□□□ 1.64
PRKCD-202ENST00000394729 SPRYD3Q8NCJ5 442 aa25.3■■□□□ 1.64
PRKCD-202ENST00000394729 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.3■■□□□ 1.64
PRKCD-202ENST00000394729 PPP1R42Q7Z4L9 355 aa25.29■■□□□ 1.64
PRKCD-202ENST00000394729 A1BGP04217 495 aa25.29■■□□□ 1.64
PRKCD-202ENST00000394729 FMNL2Q96PY5 1086 aa25.29■■□□□ 1.64
PRKCD-202ENST00000394729 UBAP1LF5GYI3 381 aa25.28■■□□□ 1.64
PRKCD-202ENST00000394729 HMMRO75330 724 aa25.28■■□□□ 1.64
PRKCD-202ENST00000394729 UPF2Q9HAU5 1272 aaKnown RBP25.28■■□□□ 1.64
PRKCD-202ENST00000394729 ROBO1Q9Y6N7 1651 aa25.28■■□□□ 1.64
PRKCD-202ENST00000394729 SNRPA1P09661 255 aaKnown RBP25.27■■□□□ 1.64
PRKCD-202ENST00000394729 PLEKHM2Q8IWE5 1019 aa25.27■■□□□ 1.64
PRKCD-202ENST00000394729 RBM42Q9BTD8 480 aaKnown RBP25.27■■□□□ 1.64
PRKCD-202ENST00000394729 OVOS2A0A0G2JMS6 1433 aa25.27■■□□□ 1.64
PRKCD-202ENST00000394729 MYD88Q99836 296 aa25.27■■□□□ 1.64
PRKCD-202ENST00000394729 CRYBG1Q9Y4K1 1723 aa25.27■■□□□ 1.64
PRKCD-202ENST00000394729 SURF6O75683 361 aaKnown RBP25.27■■□□□ 1.64
PRKCD-202ENST00000394729 HOXB7P09629 217 aa25.27■■□□□ 1.64
PRKCD-202ENST00000394729 DDX21Q9NR30 783 aaKnown RBP eCLIP25.27■■□□□ 1.64
PRKCD-202ENST00000394729 ASAP1Q9ULH1 1129 aa25.27■■□□□ 1.64
PRKCD-202ENST00000394729 GSPT1P15170 499 aaKnown RBP25.26■■□□□ 1.63
PRKCD-202ENST00000394729 HSP90AB1P08238 724 aaKnown RBP25.26■■□□□ 1.63
PRKCD-202ENST00000394729 KSR2Q6VAB6 950 aa25.26■■□□□ 1.63
PRKCD-202ENST00000394729 KDM3BQ7LBC6 1761 aa25.25■■□□□ 1.63
PRKCD-202ENST00000394729 PA2G4Q9UQ80 394 aaKnown RBP25.25■■□□□ 1.63
PRKCD-202ENST00000394729 ANP32EQ9BTT0 268 aa25.24■■□□□ 1.63
PRKCD-202ENST00000394729 HYPKQ9NX55 129 aa25.24■■□□□ 1.63
PRKCD-202ENST00000394729 NUTM1Q86Y26 1132 aa25.23■■□□□ 1.63
PRKCD-202ENST00000394729 ACSBG1Q96GR2 724 aa25.23■■□□□ 1.63
PRKCD-202ENST00000394729 KLHDC4Q8TBB5 520 aa25.23■■□□□ 1.63
PRKCD-202ENST00000394729 TMOD3Q9NYL9 352 aa25.23■■□□□ 1.63
PRKCD-202ENST00000394729 MAP4K4O95819 1239 aaPredicted RBP25.22■■□□□ 1.63
PRKCD-202ENST00000394729 OS9Q13438 667 aaPredicted RBP25.22■■□□□ 1.63
PRKCD-202ENST00000394729 ZBTB3Q9H5J0 574 aa25.22■■□□□ 1.63
PRKCD-202ENST00000394729 ATP8B2P98198 1209 aa25.22■■□□□ 1.63
PRKCD-202ENST00000394729 SIL1Q9H173 461 aa25.22■■□□□ 1.63
PRKCD-202ENST00000394729 EP400Q96L91 3159 aa25.21■■□□□ 1.63
PRKCD-202ENST00000394729 HEG1Q9ULI3 1381 aa25.2■■□□□ 1.63
PRKCD-202ENST00000394729 SOS1Q07889 1333 aaPredicted RBP25.2■■□□□ 1.63
PRKCD-202ENST00000394729 DDX58O95786 925 aaKnown RBP25.2■■□□□ 1.62
PRKCD-202ENST00000394729 TBC1D9Q6ZT07 1266 aa25.2■■□□□ 1.62
PRKCD-202ENST00000394729 TTLL7Q6ZT98 887 aa25.2■■□□□ 1.62
PRKCD-202ENST00000394729 IGKV5-2P06315 115 aa25.19■■□□□ 1.62
PRKCD-202ENST00000394729 ANKRD13DQ6ZTN6 518 aa25.19■■□□□ 1.62
PRKCD-202ENST00000394729 C8orf37Q96NL8 207 aa25.19■■□□□ 1.62
PRKCD-202ENST00000394729 PIGBQ92521 554 aa25.19■■□□□ 1.62
PRKCD-202ENST00000394729 LRRCC1Q9C099 1032 aa25.19■■□□□ 1.62
PRKCD-202ENST00000394729 NBPF26B4DH59 902 aa25.18■■□□□ 1.62
PRKCD-202ENST00000394729 NBPF14Q5TI25 921 aa25.18■■□□□ 1.62
PRKCD-202ENST00000394729 NBPF10Q6P3W6 841 aaKnown RBP25.18■■□□□ 1.62
PRKCD-202ENST00000394729 NBPF15Q8N660 670 aa25.18■■□□□ 1.62
PRKCD-202ENST00000394729 C22orf23Q9BZE7 217 aa25.18■■□□□ 1.62
PRKCD-202ENST00000394729 TOM1O60784 492 aa25.18■■□□□ 1.62
PRKCD-202ENST00000394729 BMP2KLQ5H9B9 411 aa25.18■■□□□ 1.62
PRKCD-202ENST00000394729 SUCLG2Q96I99 432 aa25.17■■□□□ 1.62
PRKCD-202ENST00000394729 SCN11AQ9UI33 1791 aa25.17■■□□□ 1.62
PRKCD-202ENST00000394729 EXOC5O00471 708 aa25.17■■□□□ 1.62
PRKCD-202ENST00000394729 SLKQ9H2G2 1235 aaPredicted RBP25.17■■□□□ 1.62
PRKCD-202ENST00000394729 NEXNQ0ZGT2 675 aa25.16■■□□□ 1.62
PRKCD-202ENST00000394729 RILPL2Q969X0 211 aa25.16■■□□□ 1.62
PRKCD-202ENST00000394729 NHSL1Q5SYE7 1610 aa25.16■■□□□ 1.62
PRKCD-202ENST00000394729 BICC1Q9H694 974 aaKnown RBP25.16■■□□□ 1.62
PRKCD-202ENST00000394729 TRIM6-TRIM34B2RNG4 842 aa25.15■■□□□ 1.62
PRKCD-202ENST00000394729 UBE3BQ7Z3V4 1068 aa25.15■■□□□ 1.62
PRKCD-202ENST00000394729 DDRGK1Q96HY6 314 aa25.15■■□□□ 1.62
PRKCD-202ENST00000394729 CHMP3Q9Y3E7 222 aa25.15■■□□□ 1.62
PRKCD-202ENST00000394729 GRM8O00222 908 aa25.14■■□□□ 1.62
PRKCD-202ENST00000394729 SDSP20132 328 aa25.14■■□□□ 1.62
PRKCD-202ENST00000394729 PRIM1P49642 420 aaKnown RBP25.14■■□□□ 1.62
PRKCD-202ENST00000394729 TTC22Q5TAA0 569 aa25.14■■□□□ 1.62
PRKCD-202ENST00000394729 DNAJC10Q8IXB1 793 aa25.14■■□□□ 1.62
PRKCD-202ENST00000394729 TBC1D32Q96NH3 1257 aa25.14■■□□□ 1.62
PRKCD-202ENST00000394729 ABCA3Q99758 1704 aa25.14■■□□□ 1.62
PRKCD-202ENST00000394729 FAM182BQ5T319 152 aa25.14■■□□□ 1.61
PRKCD-202ENST00000394729 CHMP4AQ9BY43 222 aa25.14■■□□□ 1.61
PRKCD-202ENST00000394729 GOLGB1Q14789 3259 aaKnown RBP25.14■■□□□ 1.61
PRKCD-202ENST00000394729 LINS1Q8NG48 757 aa25.13■■□□□ 1.61
PRKCD-202ENST00000394729 C5P01031 1676 aa25.13■■□□□ 1.61
PRKCD-202ENST00000394729 ERVV-2B6SEH9 535 aa25.13■■□□□ 1.61
PRKCD-202ENST00000394729 CCDC85AQ96PX6 553 aaPredicted RBP25.13■■□□□ 1.61
PRKCD-202ENST00000394729 PDE1AP54750 535 aa25.12■■□□□ 1.61
PRKCD-202ENST00000394729 EPHA10Q5JZY3 1008 aa25.12■■□□□ 1.61
PRKCD-202ENST00000394729 NEURL1BA8MQ27 555 aa25.11■■□□□ 1.61
PRKCD-202ENST00000394729 KAZALD1Q96I82 304 aa25.11■■□□□ 1.61
PRKCD-202ENST00000394729 NGLY1Q96IV0 654 aa25.11■■□□□ 1.61
PRKCD-202ENST00000394729 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.11■■□□□ 1.61
PRKCD-202ENST00000394729 LTBP4Q8N2S1 1624 aa25.11■■□□□ 1.61
PRKCD-202ENST00000394729 CACNA1FO60840 1977 aa25.1■■□□□ 1.61
PRKCD-202ENST00000394729 SIPA1L3O60292 1781 aaPredicted RBP25.1■■□□□ 1.61
PRKCD-202ENST00000394729 KCNQ4P56696 695 aa25.1■■□□□ 1.61
PRKCD-202ENST00000394729 FAM98CQ17RN3 349 aaKnown RBP25.1■■□□□ 1.61
PRKCD-202ENST00000394729 SSH3Q8TE77 659 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms