RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 BMP2KLQ5H9B9 411 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 LRSAM1Q6UWE0 723 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 CERKQ8TCT0 537 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 DDX17Q92841 729 aaKnown RBP10.58□□□□□ -0.72
RTN4-206ENST00000394611 SLAIN2Q9P270 581 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 ISY1Q9ULR0 285 aaKnown RBP10.58□□□□□ -0.72
RTN4-206ENST00000394611 H3BQV1 296 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 IFFO2Q5TF58 517 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 USP48Q86UV5 1035 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 GCC1Q96CN9 775 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 DDX11Q96FC9 970 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 MEIS3Q99687 375 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 DYNC1I1O14576 645 aa10.57□□□□□ -0.72
RTN4-206ENST00000394611 CERS3Q8IU89 383 aa10.57□□□□□ -0.72
RTN4-206ENST00000394611 C1orf167Q5SNV9 1468 aa10.57□□□□□ -0.72
RTN4-206ENST00000394611 NECAB1Q8N987 351 aa10.57□□□□□ -0.72
RTN4-206ENST00000394611 API5Q9BZZ5 524 aaKnown RBP10.57□□□□□ -0.72
RTN4-206ENST00000394611 PDE4CQ08493 712 aa10.57□□□□□ -0.72
RTN4-206ENST00000394611 LMBRD1Q9NUN5 540 aa10.57□□□□□ -0.72
RTN4-206ENST00000394611 PIP4K2BP78356 416 aa10.56□□□□□ -0.72
RTN4-206ENST00000394611 CCDC112Q8NEF3 446 aa10.56□□□□□ -0.72
RTN4-206ENST00000394611 DCCP43146 1447 aa10.56□□□□□ -0.72
RTN4-206ENST00000394611 HMGN5P82970 282 aaKnown RBP10.56□□□□□ -0.72
RTN4-206ENST00000394611 PUS7Q96PZ0 661 aaKnown RBP10.56□□□□□ -0.72
RTN4-206ENST00000394611 ZBTB40Q9NUA8 1239 aa10.56□□□□□ -0.72
RTN4-206ENST00000394611 NOL7Q9UMY1 257 aaKnown RBP10.56□□□□□ -0.72
RTN4-206ENST00000394611 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
RTN4-206ENST00000394611 ACEP12821 1306 aa10.56□□□□□ -0.72
RTN4-206ENST00000394611 FOXO3O43524 673 aa10.56□□□□□ -0.72
RTN4-206ENST00000394611 PTGS1P23219 599 aa10.56□□□□□ -0.72
RTN4-206ENST00000394611 NAA30Q147X3 362 aaPredicted RBP10.56□□□□□ -0.72
RTN4-206ENST00000394611 ISM2Q6H9L7 571 aa10.56□□□□□ -0.72
RTN4-206ENST00000394611 SULT6B1Q6IMI4 303 aa10.56□□□□□ -0.72
RTN4-206ENST00000394611 NGDNQ8NEJ9 315 aaKnown RBP10.56□□□□□ -0.72
RTN4-206ENST00000394611 UBAP1LF5GYI3 381 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 C8orf58Q8NAV2 365 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 TSPYL4Q9UJ04 414 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 ANKARQ7Z5J8 1434 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 IBSPP21815 317 aaPredicted RBP10.55□□□□□ -0.72
RTN4-206ENST00000394611 PHACTR3Q96KR7 559 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 ZRANB1Q9UGI0 708 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 A0A087WWV3 80 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 GTF2F1P35269 517 aaKnown RBP eCLIP10.55□□□□□ -0.72
RTN4-206ENST00000394611 HSP90AA4PQ58FG1 418 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 MTERF4Q7Z6M4 381 aaKnown RBP10.55□□□□□ -0.72
RTN4-206ENST00000394611 SIL1Q9H173 461 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 TOPAZ1Q8N9V7 1692 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 A0A1W2PP64 1363 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 TNNT1P13805 278 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 GUCY1B3Q02153 619 aa10.55□□□□□ -0.72
RTN4-206ENST00000394611 CD163L1Q9NR16 1453 aa10.54□□□□□ -0.72
RTN4-206ENST00000394611 RIOK3O14730 519 aaKnown RBP10.54□□□□□ -0.72
RTN4-206ENST00000394611 CASTP20810 708 aaKnown RBP10.54□□□□□ -0.72
RTN4-206ENST00000394611 GNAI1P63096 354 aa10.54□□□□□ -0.72
RTN4-206ENST00000394611 SF3A1Q15459 793 aaKnown RBP10.54□□□□□ -0.72
RTN4-206ENST00000394611 BRINP3Q76B58 766 aa10.54□□□□□ -0.72
RTN4-206ENST00000394611 CCDC186Q7Z3E2 898 aa10.54□□□□□ -0.72
RTN4-206ENST00000394611 ERCC4Q92889 916 aaPredicted RBP10.54□□□□□ -0.72
RTN4-206ENST00000394611 CCDC94Q9BW85 323 aaPredicted RBP10.54□□□□□ -0.72
RTN4-206ENST00000394611 PLEKHG3A1L390 1219 aa10.54□□□□□ -0.72
RTN4-206ENST00000394611 LUZP1Q86V48 1076 aa10.54□□□□□ -0.72
RTN4-206ENST00000394611 GSPT1P15170 499 aaKnown RBP10.53□□□□□ -0.72
RTN4-206ENST00000394611 AIMP1Q12904 312 aaKnown RBP10.53□□□□□ -0.72
RTN4-206ENST00000394611 LRMPQ12912 555 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 FAM184AQ8NB25 1140 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 JAKMIP1Q96N16 626 aaKnown RBP10.53□□□□□ -0.72
RTN4-206ENST00000394611 ITSN1Q15811 1721 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 BLMP54132 1417 aaPredicted RBP10.53□□□□□ -0.72
RTN4-206ENST00000394611 AK9Q5TCS8 1911 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 SMC2O95347 1197 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 ANXA1P04083 346 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 DNM1Q05193 864 aaKnown RBP10.53□□□□□ -0.72
RTN4-206ENST00000394611 HDAC1Q13547 482 aaPredicted RBP10.53□□□□□ -0.72
RTN4-206ENST00000394611 TNMDQ9H2S6 317 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 ZSWIM4Q9H7M6 989 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 TOM1O60784 492 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 BCL2L12Q9HB09 334 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 MBIPQ9NS73 344 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 ZNF521Q96K83 1311 aa10.53□□□□□ -0.72
RTN4-206ENST00000394611 RBM25P49756 843 aaKnown RBP10.52□□□□□ -0.72
RTN4-206ENST00000394611 PSME1Q06323 249 aa10.52□□□□□ -0.72
RTN4-206ENST00000394611 TTC22Q5TAA0 569 aa10.52□□□□□ -0.72
RTN4-206ENST00000394611 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
RTN4-206ENST00000394611 ANKRD36BQ8N2N9 1353 aa10.52□□□□□ -0.73
RTN4-206ENST00000394611 LARP1BQ659C4 914 aaKnown RBP10.52□□□□□ -0.73
RTN4-206ENST00000394611 CWC22Q9HCG8 908 aaKnown RBP10.52□□□□□ -0.73
RTN4-206ENST00000394611 GTF3C6Q969F1 213 aa10.51□□□□□ -0.73
RTN4-206ENST00000394611 SNX21Q969T3 373 aa10.51□□□□□ -0.73
RTN4-206ENST00000394611 PALD1Q9ULE6 856 aa10.51□□□□□ -0.73
RTN4-206ENST00000394611 CPSF1Q10570 1443 aaKnown RBP10.51□□□□□ -0.73
RTN4-206ENST00000394611 PRPF40BQ6NWY9 871 aaKnown RBP10.51□□□□□ -0.73
RTN4-206ENST00000394611 NINLQ9Y2I6 1382 aa10.51□□□□□ -0.73
RTN4-206ENST00000394611 BIN1O00499 593 aa10.51□□□□□ -0.73
RTN4-206ENST00000394611 ATP2B3Q16720 1220 aa10.51□□□□□ -0.73
RTN4-206ENST00000394611 RAB11FIP4Q86YS3 637 aa10.51□□□□□ -0.73
RTN4-206ENST00000394611 WDR33Q9C0J8 1336 aaKnown RBP10.51□□□□□ -0.73
RTN4-206ENST00000394611 NRDCO43847 1150 aa10.51□□□□□ -0.73
RTN4-206ENST00000394611 SDF4Q9BRK5 362 aa10.51□□□□□ -0.73
RTN4-206ENST00000394611 POLR3AO14802 1390 aaPredicted RBP10.5□□□□□ -0.73
RTN4-206ENST00000394611 CCDC192P0DO97 292 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms