RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 RAI14Q9P0K7 980 aa14.75□□□□□ -0.05
SLC28A1-203ENST00000394573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.75□□□□□ -0.05
SLC28A1-203ENST00000394573 CDK13Q14004 1512 aaKnown RBP14.75□□□□□ -0.05
SLC28A1-203ENST00000394573 ASXL1Q8IXJ9 1541 aa14.75□□□□□ -0.05
SLC28A1-203ENST00000394573 CCDC69A6NI79 296 aa14.74□□□□□ -0.05
SLC28A1-203ENST00000394573 CORO7P57737 925 aa14.74□□□□□ -0.05
SLC28A1-203ENST00000394573 SNW1Q13573 536 aaKnown RBP14.74□□□□□ -0.05
SLC28A1-203ENST00000394573 KAT2BQ92831 832 aa14.74□□□□□ -0.05
SLC28A1-203ENST00000394573 EXOC4Q96A65 974 aa14.74□□□□□ -0.05
SLC28A1-203ENST00000394573 UBXN6Q9BZV1 441 aa14.74□□□□□ -0.05
SLC28A1-203ENST00000394573 ATAD2Q6PL18 1390 aa14.74□□□□□ -0.05
SLC28A1-203ENST00000394573 DNM1Q05193 864 aaKnown RBP14.74□□□□□ -0.05
SLC28A1-203ENST00000394573 DHX8Q14562 1220 aaKnown RBP14.74□□□□□ -0.05
SLC28A1-203ENST00000394573 NEBLO76041 1014 aa14.73□□□□□ -0.05
SLC28A1-203ENST00000394573 GNL2Q13823 731 aaKnown RBP14.73□□□□□ -0.05
SLC28A1-203ENST00000394573 IVLP07476 585 aa14.73□□□□□ -0.05
SLC28A1-203ENST00000394573 CEP89Q96ST8 783 aa14.73□□□□□ -0.05
SLC28A1-203ENST00000394573 DNAJC25Q9H1X3 360 aa14.73□□□□□ -0.05
SLC28A1-203ENST00000394573 ANKRD50Q9ULJ7 1429 aa14.73□□□□□ -0.05
SLC28A1-203ENST00000394573 PLB1Q6P1J6 1458 aa14.73□□□□□ -0.05
SLC28A1-203ENST00000394573 CUL4AQ13619 759 aa14.73□□□□□ -0.05
SLC28A1-203ENST00000394573 FBXW10Q5XX13 1052 aa14.73□□□□□ -0.05
SLC28A1-203ENST00000394573 TRPM1Q7Z4N2 1603 aa14.72□□□□□ -0.05
SLC28A1-203ENST00000394573 CCDC141Q6ZP82 1450 aa14.72□□□□□ -0.05
SLC28A1-203ENST00000394573 LIG3P49916 1009 aa14.72□□□□□ -0.05
SLC28A1-203ENST00000394573 TICAM2Q86XR7 235 aa14.72□□□□□ -0.05
SLC28A1-203ENST00000394573 CFAP44Q96MT7 982 aa14.72□□□□□ -0.05
SLC28A1-203ENST00000394573 RPAP1Q9BWH6 1393 aaPredicted RBP14.72□□□□□ -0.05
SLC28A1-203ENST00000394573 PDE6BP35913 854 aa14.72□□□□□ -0.05
SLC28A1-203ENST00000394573 CC2D1AQ6P1N0 951 aaPredicted RBP14.72□□□□□ -0.05
SLC28A1-203ENST00000394573 IQUBQ8NA54 791 aa14.72□□□□□ -0.05
SLC28A1-203ENST00000394573 LIG1P18858 919 aa14.71□□□□□ -0.05
SLC28A1-203ENST00000394573 PAX7P23759 505 aa14.71□□□□□ -0.05
SLC28A1-203ENST00000394573 MAP3K11Q16584 847 aa14.71□□□□□ -0.05
SLC28A1-203ENST00000394573 CASC1Q6TDU7 716 aa14.71□□□□□ -0.05
SLC28A1-203ENST00000394573 TMEM87AQ8NBN3 555 aa14.71□□□□□ -0.05
SLC28A1-203ENST00000394573 JPH2Q9BR39 696 aaPredicted RBP14.71□□□□□ -0.05
SLC28A1-203ENST00000394573 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
SLC28A1-203ENST00000394573 CARD6Q9BX69 1037 aa14.71□□□□□ -0.05
SLC28A1-203ENST00000394573 L2HGDHQ9H9P8 463 aa14.71□□□□□ -0.05
SLC28A1-203ENST00000394573 CCDC196A0A1B0GTZ2 297 aa14.71□□□□□ -0.06
SLC28A1-203ENST00000394573 PHACTR2O75167 634 aa14.71□□□□□ -0.06
SLC28A1-203ENST00000394573 CCZ1BP86790 482 aa14.71□□□□□ -0.06
SLC28A1-203ENST00000394573 CCZ1P86791 482 aaPredicted RBP14.71□□□□□ -0.06
SLC28A1-203ENST00000394573 TADA2BQ86TJ2 420 aa14.71□□□□□ -0.06
SLC28A1-203ENST00000394573 ZNF428Q96B54 188 aa14.71□□□□□ -0.06
SLC28A1-203ENST00000394573 BORCS6Q96GS4 357 aa14.71□□□□□ -0.06
SLC28A1-203ENST00000394573 KIF2AO00139 706 aaPredicted RBP14.7□□□□□ -0.06
SLC28A1-203ENST00000394573 N4BP1O75113 896 aaKnown RBP14.7□□□□□ -0.06
SLC28A1-203ENST00000394573 CCDC30Q5VVM6 783 aa14.7□□□□□ -0.06
SLC28A1-203ENST00000394573 NBPF6Q5VWK0 638 aa14.7□□□□□ -0.06
SLC28A1-203ENST00000394573 CPLX2Q6PUV4 134 aaKnown RBP14.7□□□□□ -0.06
SLC28A1-203ENST00000394573 NBPF4Q96M43 638 aa14.7□□□□□ -0.06
SLC28A1-203ENST00000394573 SMC2O95347 1197 aa14.7□□□□□ -0.06
SLC28A1-203ENST00000394573 ZSCAN22P10073 491 aaPredicted RBP14.7□□□□□ -0.06
SLC28A1-203ENST00000394573 HOMER1Q86YM7 354 aa14.7□□□□□ -0.06
SLC28A1-203ENST00000394573 NUP62CLQ9H1M0 184 aa14.7□□□□□ -0.06
SLC28A1-203ENST00000394573 DNAI1Q9UI46 699 aa14.7□□□□□ -0.06
SLC28A1-203ENST00000394573 DNMT1P26358 1616 aaKnown RBP14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 A0A087WWV3 80 aa14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 H0YHG0 523 aa14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 ZBTB7BO15156 539 aaPredicted RBP14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 ZNF165P49910 485 aa14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 INHBEP58166 350 aa14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 SARNPP82979 210 aaKnown RBP14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 MCM6Q14566 821 aa14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 MPHOSPH10O00566 681 aaKnown RBP14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 ERC2O15083 957 aa14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 URI1O94763 535 aaPredicted RBP14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 TPM1P09493 284 aa14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 EVCP57679 992 aa14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 CCDC93Q567U6 631 aa14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 PDE11AQ9HCR9 933 aa14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 CCDC9Q9Y3X0 531 aaKnown RBP14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 ATP10AO60312 1499 aa14.69□□□□□ -0.06
SLC28A1-203ENST00000394573 HNRNPH1P31943 449 aaKnown RBP14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 TSHZ3Q63HK5 1081 aa14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 FAM173BQ6P4H8 233 aa14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 CARD14Q9BXL6 1004 aa14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 CEP170Q5SW79 1584 aa14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 U2AF1L5P0DN76 240 aaPredicted RBP14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 SYT1P21579 422 aa14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 U2AF1Q01081 240 aaKnown RBP eCLIP14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 ZRSR1Q15695 479 aaKnown RBP14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 KCNV1Q6PIU1 500 aa14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 FAM177A1Q8N128 213 aaPredicted RBP14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 RBM5P52756 815 aaKnown RBP eCLIP14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 GIMAP7Q8NHV1 300 aa14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 PPP1R13BQ96KQ4 1090 aa14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 TNMDQ9H2S6 317 aa14.68□□□□□ -0.06
SLC28A1-203ENST00000394573 IPO8O15397 1037 aaKnown RBP14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 LRRC31Q6UY01 552 aa14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 FBXW7Q969H0 707 aa14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 INTS4Q96HW7 963 aaKnown RBP14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 FUT8Q9BYC5 575 aa14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 PSD3Q9NYI0 1048 aa14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 FAN1Q9Y2M0 1017 aa14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 STX6O43752 255 aa14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 E4F1Q66K89 784 aaPredicted RBP14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms