RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	SLAIN2	Q9P270	581 aa		11.49	□□□□□ -0.57
MITF-205	ENST00000394348	KDM6A	O15550	1401 aa	Predicted RBP	11.49	□□□□□ -0.57
MITF-205	ENST00000394348	PHKG2	P15735	406 aa		11.48	□□□□□ -0.57
MITF-205	ENST00000394348	BECN1	Q14457	450 aa		11.48	□□□□□ -0.57
MITF-205	ENST00000394348	MPRIP	Q6WCQ1	1025 aa		11.48	□□□□□ -0.57
MITF-205	ENST00000394348	IFNL2	Q8IZJ0	200 aa		11.48	□□□□□ -0.57
MITF-205	ENST00000394348	NLRP2	Q9NX02	1062 aa		11.48	□□□□□ -0.57
MITF-205	ENST00000394348	DBF4	Q9UBU7	674 aa	Predicted RBP	11.48	□□□□□ -0.57
MITF-205	ENST00000394348	DAXX	Q9UER7	740 aa	Predicted RBP	11.48	□□□□□ -0.57
MITF-205	ENST00000394348	COL5A2	P05997	1499 aa	Predicted RBP	11.47	□□□□□ -0.57
MITF-205	ENST00000394348	WDR17	Q8IZU2	1322 aa		11.47	□□□□□ -0.57
MITF-205	ENST00000394348	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.47	□□□□□ -0.57
MITF-205	ENST00000394348		F6X3S4	739 aa		11.47	□□□□□ -0.57
MITF-205	ENST00000394348	GIGYF1	O75420	1035 aa	Predicted RBP	11.47	□□□□□ -0.57
MITF-205	ENST00000394348	SEC24B	O95487	1268 aa		11.47	□□□□□ -0.57
MITF-205	ENST00000394348	SLC4A10	Q6U841	1118 aa		11.47	□□□□□ -0.57
MITF-205	ENST00000394348	DCAF5	Q96JK2	942 aa		11.47	□□□□□ -0.57
MITF-205	ENST00000394348	HDAC5	Q9UQL6	1122 aa		11.47	□□□□□ -0.57
MITF-205	ENST00000394348	CSB-PGBD3	P0DP91	1061 aa		11.46	□□□□□ -0.57
MITF-205	ENST00000394348	ATP8B2	P98198	1209 aa		11.46	□□□□□ -0.57
MITF-205	ENST00000394348	KLHL34	Q8N239	644 aa		11.46	□□□□□ -0.57
MITF-205	ENST00000394348	DDX17	Q92841	729 aa	Known RBP	11.46	□□□□□ -0.57
MITF-205	ENST00000394348	SRCIN1	Q9C0H9	1055 aa		11.46	□□□□□ -0.57
MITF-205	ENST00000394348	SLC52A2	Q9HAB3	445 aa		11.46	□□□□□ -0.57
MITF-205	ENST00000394348	LAMB4	A4D0S4	1761 aa		11.46	□□□□□ -0.58
MITF-205	ENST00000394348	ALDH1L1	O75891	902 aa		11.45	□□□□□ -0.58
MITF-205	ENST00000394348	RBM25	P49756	843 aa	Known RBP	11.45	□□□□□ -0.58
MITF-205	ENST00000394348	PLEKHM2	Q8IWE5	1019 aa		11.45	□□□□□ -0.58
MITF-205	ENST00000394348	DNAAF4	Q8WXU2	420 aa		11.45	□□□□□ -0.58
MITF-205	ENST00000394348	OSBPL3	Q9H4L5	887 aa		11.45	□□□□□ -0.58
MITF-205	ENST00000394348	HYPK	Q9NX55	129 aa		11.45	□□□□□ -0.58
MITF-205	ENST00000394348	CHPF2	Q9P2E5	772 aa		11.45	□□□□□ -0.58
MITF-205	ENST00000394348	USP35	Q9P2H5	1018 aa		11.45	□□□□□ -0.58
MITF-205	ENST00000394348	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.45	□□□□□ -0.58
MITF-205	ENST00000394348	CDC45	O75419	566 aa		11.44	□□□□□ -0.58
MITF-205	ENST00000394348	TTC22	Q5TAA0	569 aa		11.44	□□□□□ -0.58
MITF-205	ENST00000394348	C22orf23	Q9BZE7	217 aa		11.44	□□□□□ -0.58
MITF-205	ENST00000394348	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
MITF-205	ENST00000394348	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.44	□□□□□ -0.58
MITF-205	ENST00000394348	ADCY9	O60503	1353 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	C5	P01031	1676 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	PAPPA	Q13219	1627 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	AOX1	Q06278	1338 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	PCDH11X	Q9BZA7	1347 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	PCDH11Y	Q9BZA8	1340 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	KCNQ3	O43525	872 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	DDX58	O95786	925 aa	Known RBP	11.43	□□□□□ -0.58
MITF-205	ENST00000394348	UBTFL1	P0CB47	393 aa	Predicted RBP	11.43	□□□□□ -0.58
MITF-205	ENST00000394348	BEND3	Q5T5X7	828 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	ZNF790	Q6PG37	636 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.43	□□□□□ -0.58
MITF-205	ENST00000394348	RASEF	Q8IZ41	740 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	CABLES1	Q8TDN4	633 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	CARD10	Q9BWT7	1032 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	USP44	Q9H0E7	712 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	PRDM11	Q9NQV5	511 aa		11.43	□□□□□ -0.58
MITF-205	ENST00000394348	GLI3	P10071	1580 aa		11.42	□□□□□ -0.58
MITF-205	ENST00000394348	ERBB4	Q15303	1308 aa		11.42	□□□□□ -0.58
MITF-205	ENST00000394348	UBR2	Q8IWV8	1755 aa		11.42	□□□□□ -0.58
MITF-205	ENST00000394348	RAB11FIP3	O75154	756 aa		11.42	□□□□□ -0.58
MITF-205	ENST00000394348	EIF2S2	P20042	333 aa	Known RBP	11.42	□□□□□ -0.58
MITF-205	ENST00000394348	CHRNA2	Q15822	529 aa		11.42	□□□□□ -0.58
MITF-205	ENST00000394348	SSH3	Q8TE77	659 aa		11.42	□□□□□ -0.58
MITF-205	ENST00000394348	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.42	□□□□□ -0.58
MITF-205	ENST00000394348	PHAX	Q9H814	394 aa	Known RBP	11.42	□□□□□ -0.58
MITF-205	ENST00000394348	TUBGCP6	Q96RT7	1819 aa		11.42	□□□□□ -0.58
MITF-205	ENST00000394348	COL14A1	Q05707	1796 aa	Known RBP	11.41	□□□□□ -0.58
MITF-205	ENST00000394348	SALL3	Q9BXA9	1300 aa		11.41	□□□□□ -0.58
MITF-205	ENST00000394348	SHANK3	Q9BYB0	1731 aa		11.41	□□□□□ -0.58
MITF-205	ENST00000394348	CYP27B1	O15528	508 aa		11.41	□□□□□ -0.58
MITF-205	ENST00000394348	NUBP1	P53384	320 aa		11.41	□□□□□ -0.58
MITF-205	ENST00000394348	MTX1	Q13505	466 aa		11.41	□□□□□ -0.58
MITF-205	ENST00000394348	NKX1-1	Q15270	411 aa	Predicted RBP	11.41	□□□□□ -0.58
MITF-205	ENST00000394348	KSR2	Q6VAB6	950 aa		11.41	□□□□□ -0.58
MITF-205	ENST00000394348	NECTIN2	Q92692	538 aa		11.41	□□□□□ -0.58
MITF-205	ENST00000394348	UTY	O14607	1347 aa		11.4	□□□□□ -0.58
MITF-205	ENST00000394348	PLCH1	Q4KWH8	1693 aa		11.4	□□□□□ -0.58
MITF-205	ENST00000394348	PI4KAP2	A4QPH2	592 aa		11.4	□□□□□ -0.58
MITF-205	ENST00000394348	ERVV-2	B6SEH9	535 aa		11.4	□□□□□ -0.58
MITF-205	ENST00000394348	GSPT1	P15170	499 aa	Known RBP	11.4	□□□□□ -0.58
MITF-205	ENST00000394348	MFAP1	P55081	439 aa	Known RBP	11.4	□□□□□ -0.58
MITF-205	ENST00000394348	HSP90AB4P	Q58FF6	505 aa		11.4	□□□□□ -0.58
MITF-205	ENST00000394348	CASC1	Q6TDU7	716 aa		11.4	□□□□□ -0.58
MITF-205	ENST00000394348	TBC1D9	Q6ZT07	1266 aa		11.4	□□□□□ -0.58
MITF-205	ENST00000394348	PI4KAP1	Q8N8J0	262 aa		11.4	□□□□□ -0.58
MITF-205	ENST00000394348	FMNL2	Q96PY5	1086 aa		11.4	□□□□□ -0.58
MITF-205	ENST00000394348	LRRCC1	Q9C099	1032 aa		11.4	□□□□□ -0.58
MITF-205	ENST00000394348	LRRFIP2	Q9Y608	721 aa	Known RBP	11.4	□□□□□ -0.58
MITF-205	ENST00000394348	SNRPA1	P09661	255 aa	Known RBP	11.39	□□□□□ -0.59
MITF-205	ENST00000394348	TTC5	Q8N0Z6	440 aa		11.39	□□□□□ -0.59
MITF-205	ENST00000394348	ZNF579	Q8NAF0	562 aa	Known RBP	11.39	□□□□□ -0.59
MITF-205	ENST00000394348	LINS1	Q8NG48	757 aa		11.39	□□□□□ -0.59
MITF-205	ENST00000394348	ZCRB1	Q8TBF4	217 aa	Known RBP	11.39	□□□□□ -0.59
MITF-205	ENST00000394348	SNX21	Q969T3	373 aa		11.39	□□□□□ -0.59
MITF-205	ENST00000394348	STAP2	Q9UGK3	403 aa		11.39	□□□□□ -0.59
MITF-205	ENST00000394348	COL15A1	P39059	1388 aa		11.39	□□□□□ -0.59
MITF-205	ENST00000394348	TNS2	Q63HR2	1409 aa		11.38	□□□□□ -0.59
MITF-205	ENST00000394348	IL2RB	P14784	551 aa		11.38	□□□□□ -0.59
MITF-205	ENST00000394348	TOM1L2	Q6ZVM7	507 aa		11.38	□□□□□ -0.59
MITF-205	ENST00000394348	LRP6	O75581	1613 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms