RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 SCN11AQ9UI33 1791 aa21.35■■□□□ 1.01
TGFA-202ENST00000394241 DCAF5Q96JK2 942 aa21.34■■□□□ 1.01
TGFA-202ENST00000394241 TNRC6CQ9HCJ0 1690 aaKnown RBP21.34■■□□□ 1.01
TGFA-202ENST00000394241 ADAMTS7Q9UKP4 1686 aa21.34■■□□□ 1.01
TGFA-202ENST00000394241 CCER2I3L3R5 266 aa21.33■■□□□ 1.01
TGFA-202ENST00000394241 TRAPPC3LQ5T215 181 aa21.33■■□□□ 1.01
TGFA-202ENST00000394241 PNISRQ8TF01 805 aaKnown RBP21.32■■□□□ 1
TGFA-202ENST00000394241 RTCBQ9Y3I0 505 aaKnown RBP21.32■■□□□ 1
TGFA-202ENST00000394241 CCDC146Q8IYE0 955 aa21.31■■□□□ 1
TGFA-202ENST00000394241 RUNDC1Q96C34 613 aa21.31■■□□□ 1
TGFA-202ENST00000394241 RRAGCQ9HB90 399 aa21.31■■□□□ 1
TGFA-202ENST00000394241 DLG5Q8TDM6 1919 aa21.31■■□□□ 1
TGFA-202ENST00000394241 GNAT3A8MTJ3 354 aa21.3■■□□□ 1
TGFA-202ENST00000394241 KCNA3P22001 575 aa21.3■■□□□ 1
TGFA-202ENST00000394241 SMC1BQ8NDV3 1235 aa21.3■■□□□ 1
TGFA-202ENST00000394241 RNF181Q9P0P0 153 aa21.3■■□□□ 1
TGFA-202ENST00000394241 PARP3Q9Y6F1 533 aa21.3■■□□□ 1
TGFA-202ENST00000394241 MRC1P22897 1456 aa21.3■■□□□ 1
TGFA-202ENST00000394241 SBF1O95248 1867 aa21.29■■□□□ 1
TGFA-202ENST00000394241 NFE2L2Q16236 605 aa21.29■■□□□ 1
TGFA-202ENST00000394241 PIM2Q9P1W9 311 aa21.29■■□□□ 1
TGFA-202ENST00000394241 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
TGFA-202ENST00000394241 GYS1P13807 737 aa21.28■■□□□ 1
TGFA-202ENST00000394241 ADRA2BP18089 450 aa21.28■■□□□ 1
TGFA-202ENST00000394241 MIER1Q8N108 512 aa21.28■■□□□ 1
TGFA-202ENST00000394241 ARHGEF1Q92888 912 aaKnown RBP21.28■■□□□ 1
TGFA-202ENST00000394241 ATG3Q9NT62 314 aa21.28■■□□□ 1
TGFA-202ENST00000394241 RNMTO43148 476 aaKnown RBP21.27■■□□□ 1
TGFA-202ENST00000394241 ZNF831Q5JPB2 1677 aa21.27■■□□□ 1
TGFA-202ENST00000394241 HSPA1AP0DMV8 641 aaKnown RBP21.26■□□□□ 0.99
TGFA-202ENST00000394241 HSPA1BP0DMV9 641 aaKnown RBP21.26■□□□□ 0.99
TGFA-202ENST00000394241 DALRD3Q5D0E6 543 aaKnown RBP21.26■□□□□ 0.99
TGFA-202ENST00000394241 RTF1Q92541 710 aaKnown RBP21.26■□□□□ 0.99
TGFA-202ENST00000394241 COL5A3P25940 1745 aaPredicted RBP21.26■□□□□ 0.99
TGFA-202ENST00000394241 RFC4P35249 363 aa21.25■□□□□ 0.99
TGFA-202ENST00000394241 CABP4P57796 275 aa21.25■□□□□ 0.99
TGFA-202ENST00000394241 FAM9BQ8IZU0 186 aa21.25■□□□□ 0.99
TGFA-202ENST00000394241 HTATSF1O43719 755 aaKnown RBP21.24■□□□□ 0.99
TGFA-202ENST00000394241 TMPOP42166 694 aaKnown RBP21.24■□□□□ 0.99
TGFA-202ENST00000394241 RC3H1Q5TC82 1133 aaKnown RBP21.24■□□□□ 0.99
TGFA-202ENST00000394241 LGR6Q9HBX8 967 aa21.24■□□□□ 0.99
TGFA-202ENST00000394241 CEMIPQ8WUJ3 1361 aa21.23■□□□□ 0.99
TGFA-202ENST00000394241 SIPA1L3O60292 1781 aaPredicted RBP21.23■□□□□ 0.99
TGFA-202ENST00000394241 SLC4A9Q96Q91 983 aa21.23■□□□□ 0.99
TGFA-202ENST00000394241 CNTNAP4Q9C0A0 1308 aa21.23■□□□□ 0.99
TGFA-202ENST00000394241 RPS6KA4O75676 772 aa21.22■□□□□ 0.99
TGFA-202ENST00000394241 LMOD3Q0VAK6 560 aa21.22■□□□□ 0.99
TGFA-202ENST00000394241 RBM42Q9BTD8 480 aaKnown RBP21.22■□□□□ 0.99
TGFA-202ENST00000394241 SLC52A2Q9HAB3 445 aa21.22■□□□□ 0.99
TGFA-202ENST00000394241 MYH14Q7Z406 1995 aaKnown RBP21.22■□□□□ 0.99
TGFA-202ENST00000394241 RIPK4P57078 832 aa21.21■□□□□ 0.99
TGFA-202ENST00000394241 TEFQ10587 303 aa21.21■□□□□ 0.99
TGFA-202ENST00000394241 IL17REQ8NFR9 667 aa21.21■□□□□ 0.99
TGFA-202ENST00000394241 RRP7AQ9Y3A4 280 aaKnown RBP21.21■□□□□ 0.99
TGFA-202ENST00000394241 MCM10Q7L590 875 aa21.2■□□□□ 0.98
TGFA-202ENST00000394241 APAF1O14727 1248 aa21.19■□□□□ 0.98
TGFA-202ENST00000394241 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
TGFA-202ENST00000394241 NFATC2IPQ8NCF5 419 aa21.19■□□□□ 0.98
TGFA-202ENST00000394241 ZC3H4Q9UPT8 1303 aaKnown RBP21.19■□□□□ 0.98
TGFA-202ENST00000394241 CHRNA5P30532 468 aa21.18■□□□□ 0.98
TGFA-202ENST00000394241 DCTN1Q14203 1278 aa21.18■□□□□ 0.98
TGFA-202ENST00000394241 VEGFAP15692 232 aaPredicted RBP21.16■□□□□ 0.98
TGFA-202ENST00000394241 DDR1Q08345 913 aa21.16■□□□□ 0.98
TGFA-202ENST00000394241 FKBP8Q14318 412 aa21.15■□□□□ 0.98
TGFA-202ENST00000394241 GLTPD2A6NH11 291 aa21.14■□□□□ 0.97
TGFA-202ENST00000394241 RASSF7Q02833 373 aa21.14■□□□□ 0.97
TGFA-202ENST00000394241 SRP68Q9UHB9 627 aaKnown RBP21.14■□□□□ 0.97
TGFA-202ENST00000394241 UBR2Q8IWV8 1755 aa21.14■□□□□ 0.97
TGFA-202ENST00000394241 USP42Q9H9J4 1324 aaKnown RBP21.13■□□□□ 0.97
TGFA-202ENST00000394241 THUMPD2Q9BTF0 503 aaKnown RBP21.13■□□□□ 0.97
TGFA-202ENST00000394241 TRIM35Q9UPQ4 493 aa21.13■□□□□ 0.97
TGFA-202ENST00000394241 CCDC88AQ3V6T2 1871 aa21.13■□□□□ 0.97
TGFA-202ENST00000394241 LMNB1P20700 586 aa21.12■□□□□ 0.97
TGFA-202ENST00000394241 TIAM2Q8IVF5 1701 aa21.12■□□□□ 0.97
TGFA-202ENST00000394241 KDM3BQ7LBC6 1761 aa21.11■□□□□ 0.97
TGFA-202ENST00000394241 BTBD11A6QL63 1104 aa21.11■□□□□ 0.97
TGFA-202ENST00000394241 CRKLP46109 303 aaKnown RBP21.11■□□□□ 0.97
TGFA-202ENST00000394241 TTC5Q8N0Z6 440 aa21.11■□□□□ 0.97
TGFA-202ENST00000394241 POLRMTO00411 1230 aaKnown RBP21.1■□□□□ 0.97
TGFA-202ENST00000394241 SLC39A6Q13433 755 aa21.1■□□□□ 0.97
TGFA-202ENST00000394241 TAF7Q15545 349 aaPredicted RBP21.1■□□□□ 0.97
TGFA-202ENST00000394241 NCBP3Q53F19 620 aaKnown RBP21.09■□□□□ 0.97
TGFA-202ENST00000394241 PTCD1O75127 700 aaKnown RBP21.08■□□□□ 0.97
TGFA-202ENST00000394241 CALD1Q05682 793 aaKnown RBP21.08■□□□□ 0.97
TGFA-202ENST00000394241 CCDC27Q2M243 656 aa21.08■□□□□ 0.97
TGFA-202ENST00000394241 ZNF790Q6PG37 636 aa21.08■□□□□ 0.97
TGFA-202ENST00000394241 DLEC1Q9Y238 1755 aa21.08■□□□□ 0.96
TGFA-202ENST00000394241 TJP1Q07157 1748 aa21.07■□□□□ 0.96
TGFA-202ENST00000394241 AFDNP55196 1824 aaKnown RBP21.07■□□□□ 0.96
TGFA-202ENST00000394241 SLC34A2O95436 690 aa21.07■□□□□ 0.96
TGFA-202ENST00000394241 TM4SF1P30408 202 aa21.07■□□□□ 0.96
TGFA-202ENST00000394241 NGEFQ8N5V2 710 aa21.07■□□□□ 0.96
TGFA-202ENST00000394241 POTECB2RU33 542 aa21.04■□□□□ 0.96
TGFA-202ENST00000394241 FMNL2Q96PY5 1086 aa21.04■□□□□ 0.96
TGFA-202ENST00000394241 CREBZFQ9NS37 354 aa21.04■□□□□ 0.96
TGFA-202ENST00000394241 BABAM1Q9NWV8 329 aa21.04■□□□□ 0.96
TGFA-202ENST00000394241 MKRN1Q9UHC7 482 aaKnown RBP21.04■□□□□ 0.96
TGFA-202ENST00000394241 TSPYL4Q9UJ04 414 aa21.04■□□□□ 0.96
TGFA-202ENST00000394241 SALL2Q9Y467 1007 aaPredicted RBP21.04■□□□□ 0.96
TGFA-202ENST00000394241 ZPR1O75312 459 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms