RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 ARFGAP3Q9NP61 516 aa9.99□□□□□ -0.81
DHFR2-202ENST00000394221 VPS18Q9P253 973 aa9.99□□□□□ -0.81
DHFR2-202ENST00000394221 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.99□□□□□ -0.81
DHFR2-202ENST00000394221 NRDCO43847 1150 aa9.99□□□□□ -0.81
DHFR2-202ENST00000394221 GCC1Q96CN9 775 aa9.99□□□□□ -0.81
DHFR2-202ENST00000394221 DDX11Q96FC9 970 aa9.99□□□□□ -0.81
DHFR2-202ENST00000394221 VEZTQ9HBM0 779 aa9.99□□□□□ -0.81
DHFR2-202ENST00000394221 GNL3LQ9NVN8 582 aaKnown RBP9.99□□□□□ -0.81
DHFR2-202ENST00000394221 EFCAB5A4FU69 1503 aa9.99□□□□□ -0.81
DHFR2-202ENST00000394221 ABCC2Q92887 1545 aa9.99□□□□□ -0.81
DHFR2-202ENST00000394221 KANK1Q14678 1352 aa9.99□□□□□ -0.81
DHFR2-202ENST00000394221 IPO7O95373 1038 aaKnown RBP9.98□□□□□ -0.81
DHFR2-202ENST00000394221 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 HOMER1Q86YM7 354 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 REXO1L1PQ8IX06 675 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 ORC3Q9UBD5 711 aaPredicted RBP9.98□□□□□ -0.81
DHFR2-202ENST00000394221 ATP6V1DQ9Y5K8 247 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 USP27XA6NNY8 438 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 NEDD9Q14511 834 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 LUZP1Q86V48 1076 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 FAM210AQ96ND0 272 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 CPSF2Q9P2I0 782 aaKnown RBP9.98□□□□□ -0.81
DHFR2-202ENST00000394221 CNPY2Q9Y2B0 182 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 EHBP1L1Q8N3D4 1523 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 DISP3Q9P2K9 1392 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
DHFR2-202ENST00000394221 IFT140Q96RY7 1462 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 C11orf91Q3C1V1 193 aa9.98□□□□□ -0.81
DHFR2-202ENST00000394221 ELF1P32519 619 aa9.97□□□□□ -0.81
DHFR2-202ENST00000394221 MAP3K11Q16584 847 aa9.97□□□□□ -0.81
DHFR2-202ENST00000394221 CWC27Q6UX04 472 aaKnown RBP9.97□□□□□ -0.81
DHFR2-202ENST00000394221 IRAK4Q9NWZ3 460 aa9.97□□□□□ -0.81
DHFR2-202ENST00000394221 PIK3C2GO75747 1445 aa9.97□□□□□ -0.81
DHFR2-202ENST00000394221 GOLGA6L19H0YKK7 550 aa9.97□□□□□ -0.81
DHFR2-202ENST00000394221 IPO8O15397 1037 aaKnown RBP9.97□□□□□ -0.81
DHFR2-202ENST00000394221 TRIM27P14373 513 aa9.97□□□□□ -0.81
DHFR2-202ENST00000394221 ATF7IPQ6VMQ6 1270 aa9.97□□□□□ -0.81
DHFR2-202ENST00000394221 MIEF2Q96C03 454 aa9.97□□□□□ -0.81
DHFR2-202ENST00000394221 COL17A1Q9UMD9 1497 aaPredicted RBP9.97□□□□□ -0.81
DHFR2-202ENST00000394221 ROCK1Q13464 1354 aa9.97□□□□□ -0.81
DHFR2-202ENST00000394221 EIF3JO75822 258 aaKnown RBP9.97□□□□□ -0.81
DHFR2-202ENST00000394221 HSP90B2PQ58FF3 399 aa9.97□□□□□ -0.81
DHFR2-202ENST00000394221 JPH2Q9BR39 696 aaPredicted RBP9.97□□□□□ -0.81
DHFR2-202ENST00000394221 ACBD3Q9H3P7 528 aa9.97□□□□□ -0.81
DHFR2-202ENST00000394221 ERBB3P21860 1342 aa9.96□□□□□ -0.81
DHFR2-202ENST00000394221 SCAF11Q99590 1463 aaKnown RBP9.96□□□□□ -0.81
DHFR2-202ENST00000394221 CTAGE5O15320 804 aa9.96□□□□□ -0.81
DHFR2-202ENST00000394221 ANAPC15P60006 121 aa9.96□□□□□ -0.81
DHFR2-202ENST00000394221 WDR63Q8IWG1 891 aa9.96□□□□□ -0.81
DHFR2-202ENST00000394221 CCAR2Q8N163 923 aaKnown RBP9.96□□□□□ -0.81
DHFR2-202ENST00000394221 ERBINQ96RT1 1412 aa9.96□□□□□ -0.81
DHFR2-202ENST00000394221 SPAG9O60271 1321 aaKnown RBP9.96□□□□□ -0.81
DHFR2-202ENST00000394221 CCDC158Q5M9N0 1113 aa9.96□□□□□ -0.82
DHFR2-202ENST00000394221 FOXR1Q6PIV2 292 aa9.96□□□□□ -0.82
DHFR2-202ENST00000394221 LRRC8AQ8IWT6 810 aa9.96□□□□□ -0.82
DHFR2-202ENST00000394221 TMEM57Q8N5G2 664 aa9.96□□□□□ -0.82
DHFR2-202ENST00000394221 TMEM87AQ8NBN3 555 aa9.96□□□□□ -0.82
DHFR2-202ENST00000394221 TRIM6Q9C030 488 aaPredicted RBP9.96□□□□□ -0.82
DHFR2-202ENST00000394221 HNRNPH1P31943 449 aaKnown RBP9.96□□□□□ -0.82
DHFR2-202ENST00000394221 TEX11Q8IYF3 940 aa9.96□□□□□ -0.82
DHFR2-202ENST00000394221 N4BP2L2Q92802 583 aaPredicted RBP9.96□□□□□ -0.82
DHFR2-202ENST00000394221 FUCA2Q9BTY2 467 aa9.96□□□□□ -0.82
DHFR2-202ENST00000394221 SRRTQ9BXP5 876 aaKnown RBP9.96□□□□□ -0.82
DHFR2-202ENST00000394221 L2HGDHQ9H9P8 463 aa9.96□□□□□ -0.82
DHFR2-202ENST00000394221 TBC1D8O95759 1140 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 LIG3P49916 1009 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 TYRO3Q06418 890 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 SKIDA1Q1XH10 827 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 INTS4Q96HW7 963 aaKnown RBP9.95□□□□□ -0.82
DHFR2-202ENST00000394221 NUP62CLQ9H1M0 184 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 CCDC141Q6ZP82 1450 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 CCDC69A6NI79 296 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 STAG1Q8WVM7 1258 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 ATAD2Q6PL18 1390 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 SAMD9Q5K651 1589 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 CCDC30Q5VVM6 783 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 CC2D1AQ6P1N0 951 aaPredicted RBP9.95□□□□□ -0.82
DHFR2-202ENST00000394221 ZBTB40Q9NUA8 1239 aa9.95□□□□□ -0.82
DHFR2-202ENST00000394221 PLEKHD1A6NEE1 506 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 RPS6KA5O75582 802 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 TUBB4AP04350 444 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 EVCP57679 992 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 UBXN6Q9BZV1 441 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 CBX8Q9HC52 389 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 SPATS2LQ9NUQ6 558 aaKnown RBP9.94□□□□□ -0.82
DHFR2-202ENST00000394221 ETAA1Q9NY74 926 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 ARHGEF12Q9NZN5 1544 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 URI1O94763 535 aaPredicted RBP9.94□□□□□ -0.82
DHFR2-202ENST00000394221 CCDC27Q2M243 656 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 ANO6Q4KMQ2 910 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 PLA2G4DQ86XP0 818 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 CTCFLQ8NI51 663 aaPredicted RBP9.94□□□□□ -0.82
DHFR2-202ENST00000394221 SRCIN1Q9C0H9 1055 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 CHMP3Q9Y3E7 222 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 UGGT2Q9NYU1 1516 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 CFAP74Q9C0B2 1584 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 SHROOM2Q13796 1616 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 GOLGA6L4A6NEF3 574 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 C21orf2O43822 256 aa9.94□□□□□ -0.82
DHFR2-202ENST00000394221 PAX7P23759 505 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms