RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 CASP7P55210 303 aa10.75□□□□□ -0.69
GAPVD1-204ENST00000394083 DTNBO60941 627 aa10.75□□□□□ -0.69
GAPVD1-204ENST00000394083 TSPYL4Q9UJ04 414 aa10.75□□□□□ -0.69
GAPVD1-204ENST00000394083 USP16Q9Y5T5 823 aa10.75□□□□□ -0.69
GAPVD1-204ENST00000394083 TAF6LQ9Y6J9 622 aa10.75□□□□□ -0.69
GAPVD1-204ENST00000394083 PKP1Q13835 747 aa10.75□□□□□ -0.69
GAPVD1-204ENST00000394083 POLA2Q14181 598 aa10.75□□□□□ -0.69
GAPVD1-204ENST00000394083 IBTKQ9P2D0 1353 aaPredicted RBP10.74□□□□□ -0.69
GAPVD1-204ENST00000394083 RBM25P49756 843 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-204ENST00000394083 COL14A1Q05707 1796 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-204ENST00000394083 PHKG2P15735 406 aa10.74□□□□□ -0.69
GAPVD1-204ENST00000394083 PSME1Q06323 249 aa10.74□□□□□ -0.69
GAPVD1-204ENST00000394083 PROSER2Q86WR7 435 aaPredicted RBP10.74□□□□□ -0.69
GAPVD1-204ENST00000394083 NPHP3Q7Z494 1330 aa10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 NKX2-3Q8TAU0 364 aa10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 PI4K2BQ8TCG2 481 aa10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 CWF19L2Q2TBE0 894 aaKnown RBP10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 PALD1Q9ULE6 856 aa10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 ARAP2Q8WZ64 1704 aa10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 FRAT2O75474 233 aaPredicted RBP10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 SLC51AQ86UW1 340 aa10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 C4AP0C0L4 1744 aa10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 C4BP0C0L5 1744 aa10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 DOCK2Q92608 1830 aa10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 EXOC6BQ9Y2D4 811 aa10.73□□□□□ -0.69
GAPVD1-204ENST00000394083 NBR1Q14596 966 aa10.72□□□□□ -0.69
GAPVD1-204ENST00000394083 TAF7Q15545 349 aaPredicted RBP10.72□□□□□ -0.69
GAPVD1-204ENST00000394083 PTF1AQ7RTS3 328 aa10.72□□□□□ -0.69
GAPVD1-204ENST00000394083 HTATSF1O43719 755 aaKnown RBP10.72□□□□□ -0.69
GAPVD1-204ENST00000394083 FTSJ3Q8IY81 847 aaKnown RBP10.72□□□□□ -0.69
GAPVD1-204ENST00000394083 ZNF496Q96IT1 587 aaPredicted RBP10.72□□□□□ -0.69
GAPVD1-204ENST00000394083 PTPRCP08575 1304 aa10.72□□□□□ -0.69
GAPVD1-204ENST00000394083 SDSP20132 328 aa10.72□□□□□ -0.69
GAPVD1-204ENST00000394083 BMP2KLQ5H9B9 411 aa10.72□□□□□ -0.69
GAPVD1-204ENST00000394083 NFATC2IPQ8NCF5 419 aa10.72□□□□□ -0.69
GAPVD1-204ENST00000394083 LRP5O75197 1615 aa10.72□□□□□ -0.69
GAPVD1-204ENST00000394083 USP34Q70CQ2 3546 aa10.71□□□□□ -0.69
GAPVD1-204ENST00000394083 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.71□□□□□ -0.69
GAPVD1-204ENST00000394083 KLHDC4Q8TBB5 520 aa10.71□□□□□ -0.69
GAPVD1-204ENST00000394083 UTYO14607 1347 aa10.71□□□□□ -0.7
GAPVD1-204ENST00000394083 BRWD3Q6RI45 1802 aa10.71□□□□□ -0.7
GAPVD1-204ENST00000394083 AKAP4Q5JQC9 854 aa10.71□□□□□ -0.7
GAPVD1-204ENST00000394083 TLR7Q9NYK1 1049 aaKnown RBP10.71□□□□□ -0.7
GAPVD1-204ENST00000394083 LRRFIP2Q9Y608 721 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-204ENST00000394083 ZNF646O15015 1829 aaPredicted RBP10.7□□□□□ -0.7
GAPVD1-204ENST00000394083 MKI67P46013 3256 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-204ENST00000394083 AMIGO3Q86WK7 504 aa10.7□□□□□ -0.7
GAPVD1-204ENST00000394083 ZDHHC9Q9Y397 364 aa10.7□□□□□ -0.7
GAPVD1-204ENST00000394083 HTTP42858 3142 aa10.7□□□□□ -0.7
GAPVD1-204ENST00000394083 PI4KAP2A4QPH2 592 aa10.7□□□□□ -0.7
GAPVD1-204ENST00000394083 RFX5P48382 616 aaPredicted RBP10.7□□□□□ -0.7
GAPVD1-204ENST00000394083 LARP1Q6PKG0 1096 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-204ENST00000394083 PI4KAP1Q8N8J0 262 aa10.7□□□□□ -0.7
GAPVD1-204ENST00000394083 SASH1O94885 1247 aa10.69□□□□□ -0.7
GAPVD1-204ENST00000394083 SSH3Q8TE77 659 aa10.69□□□□□ -0.7
GAPVD1-204ENST00000394083 JARID2Q92833 1246 aaPredicted RBP10.69□□□□□ -0.7
GAPVD1-204ENST00000394083 OSBPL3Q9H4L5 887 aa10.69□□□□□ -0.7
GAPVD1-204ENST00000394083 ST3GAL1Q11201 340 aa10.69□□□□□ -0.7
GAPVD1-204ENST00000394083 TTC22Q5TAA0 569 aa10.69□□□□□ -0.7
GAPVD1-204ENST00000394083 LY75O60449 1722 aa10.69□□□□□ -0.7
GAPVD1-204ENST00000394083 SLFNL1Q499Z3 407 aa10.69□□□□□ -0.7
GAPVD1-204ENST00000394083 ANKRD45Q5TZF3 282 aa10.69□□□□□ -0.7
GAPVD1-204ENST00000394083 NFKBIBQ15653 356 aa10.69□□□□□ -0.7
GAPVD1-204ENST00000394083 ZNF831Q5JPB2 1677 aa10.68□□□□□ -0.7
GAPVD1-204ENST00000394083 KAT6BQ8WYB5 2073 aa10.68□□□□□ -0.7
GAPVD1-204ENST00000394083 RWDD1Q9H446 243 aaPredicted RBP10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 SLAIN2Q9P270 581 aa10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 BTAF1O14981 1849 aa10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 GAS2L2Q8NHY3 880 aa10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 PA2G4Q9UQ80 394 aaKnown RBP10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 CDK5RAP2Q96SN8 1893 aa10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 AAMPQ13685 434 aa10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 SLC52A2Q9HAB3 445 aa10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 THSD7AQ9UPZ6 1657 aa10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 ZNF530Q6P9A1 599 aaPredicted RBP10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 ZNF790Q6PG37 636 aa10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 SYNE4Q8N205 404 aa10.67□□□□□ -0.7
GAPVD1-204ENST00000394083 IL17RAQ96F46 866 aa10.66□□□□□ -0.7
GAPVD1-204ENST00000394083 USP26Q9BXU7 913 aa10.66□□□□□ -0.7
GAPVD1-204ENST00000394083 TNRC6CQ9HCJ0 1690 aaKnown RBP10.66□□□□□ -0.7
GAPVD1-204ENST00000394083 A0A0G2JLW4 131 aa10.66□□□□□ -0.7
GAPVD1-204ENST00000394083 FOXP2O15409 715 aa10.66□□□□□ -0.7
GAPVD1-204ENST00000394083 CANXP27824 592 aaKnown RBP10.66□□□□□ -0.7
GAPVD1-204ENST00000394083 PDE1AP54750 535 aa10.66□□□□□ -0.7
GAPVD1-204ENST00000394083 SUCLG2Q96I99 432 aa10.65□□□□□ -0.7
GAPVD1-204ENST00000394083 KCNH5Q8NCM2 988 aa10.65□□□□□ -0.7
GAPVD1-204ENST00000394083 CHD4Q14839 1912 aa10.65□□□□□ -0.7
GAPVD1-204ENST00000394083 PALLDQ8WX93 1383 aa10.65□□□□□ -0.7
GAPVD1-204ENST00000394083 WDR17Q8IZU2 1322 aa10.65□□□□□ -0.71
GAPVD1-204ENST00000394083 ATP8B2P98198 1209 aa10.65□□□□□ -0.71
GAPVD1-204ENST00000394083 COL24A1Q17RW2 1714 aa10.64□□□□□ -0.71
GAPVD1-204ENST00000394083 BTBD11A6QL63 1104 aa10.64□□□□□ -0.71
GAPVD1-204ENST00000394083 MTX1Q13505 466 aa10.64□□□□□ -0.71
GAPVD1-204ENST00000394083 NDUFB9Q9Y6M9 179 aa10.64□□□□□ -0.71
GAPVD1-204ENST00000394083 BCL9LQ86UU0 1499 aa10.64□□□□□ -0.71
GAPVD1-204ENST00000394083 CYP2E1P05181 493 aaPredicted RBP10.64□□□□□ -0.71
GAPVD1-204ENST00000394083 NKX1-1Q15270 411 aaPredicted RBP10.64□□□□□ -0.71
GAPVD1-204ENST00000394083 C14orf37Q86TY3 774 aa10.64□□□□□ -0.71
GAPVD1-204ENST00000394083 SLC4A10Q6U841 1118 aa10.64□□□□□ -0.71
GAPVD1-204ENST00000394083 PNNQ9H307 717 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms