RNA–Protein interactions for RNA: ENST00000393879.3

NKIRAS2-203, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

TSL 1 (best)

Gene NKIRAS2, Length 4,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-203ENST00000393879 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
NKIRAS2-203ENST00000393879 CD163L1Q9NR16 1453 aa11.93□□□□□ -0.5
NKIRAS2-203ENST00000393879 USP19O94966 1318 aa11.93□□□□□ -0.5
NKIRAS2-203ENST00000393879 VPS37CA5D8V6 355 aaPredicted RBP11.93□□□□□ -0.5
NKIRAS2-203ENST00000393879 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
NKIRAS2-203ENST00000393879 ISY1Q9ULR0 285 aaKnown RBP11.93□□□□□ -0.5
NKIRAS2-203ENST00000393879 C19orf44Q9H6X5 657 aa11.92□□□□□ -0.5
NKIRAS2-203ENST00000393879 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
NKIRAS2-203ENST00000393879 PSMA5P28066 241 aa11.92□□□□□ -0.5
NKIRAS2-203ENST00000393879 SIRT2Q8IXJ6 389 aa11.92□□□□□ -0.5
NKIRAS2-203ENST00000393879 MYD88Q99836 296 aa11.92□□□□□ -0.5
NKIRAS2-203ENST00000393879 CDC42BPGQ6DT37 1551 aa11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 CHRNA2Q15822 529 aa11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 SYTL4Q96C24 671 aaPredicted RBP11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 USP26Q9BXU7 913 aa11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 GRPEL1Q9HAV7 217 aa11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 CPS1P31327 1500 aa11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 CADPS2Q86UW7 1296 aa11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 DNAJC2Q99543 621 aaKnown RBP11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 MBD3O95983 291 aa11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 NASPP49321 788 aaPredicted RBP11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 ESYT1Q9BSJ8 1104 aa11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 LRRFIP1Q32MZ4 808 aaKnown RBP11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 CYP46A1Q9Y6A2 500 aa11.91□□□□□ -0.5
NKIRAS2-203ENST00000393879 ZNF142P52746 1687 aaPredicted RBP11.9□□□□□ -0.5
NKIRAS2-203ENST00000393879 GSPT1P15170 499 aaKnown RBP11.9□□□□□ -0.5
NKIRAS2-203ENST00000393879 SLC39A6Q13433 755 aa11.9□□□□□ -0.5
NKIRAS2-203ENST00000393879 KSR2Q6VAB6 950 aa11.9□□□□□ -0.5
NKIRAS2-203ENST00000393879 FAM184AQ8NB25 1140 aa11.9□□□□□ -0.5
NKIRAS2-203ENST00000393879 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
NKIRAS2-203ENST00000393879 H3BQV1 296 aa11.9□□□□□ -0.5
NKIRAS2-203ENST00000393879 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
NKIRAS2-203ENST00000393879 COL3A1P02461 1466 aaPredicted RBP11.9□□□□□ -0.5
NKIRAS2-203ENST00000393879 PNMA6EA0A0J9YXQ4 647 aa11.9□□□□□ -0.51
NKIRAS2-203ENST00000393879 ALDH1L1O75891 902 aa11.9□□□□□ -0.51
NKIRAS2-203ENST00000393879 HOXB7P09629 217 aa11.9□□□□□ -0.51
NKIRAS2-203ENST00000393879 ECHDC1Q9NTX5 307 aa11.9□□□□□ -0.51
NKIRAS2-203ENST00000393879 FMNL2Q96PY5 1086 aa11.89□□□□□ -0.51
NKIRAS2-203ENST00000393879 CCDC8Q9H0W5 538 aaPredicted RBP11.89□□□□□ -0.51
NKIRAS2-203ENST00000393879 ADAMTS13Q76LX8 1427 aa11.89□□□□□ -0.51
NKIRAS2-203ENST00000393879 NPHP1O15259 732 aa11.89□□□□□ -0.51
NKIRAS2-203ENST00000393879 WDR33Q9C0J8 1336 aaKnown RBP11.89□□□□□ -0.51
NKIRAS2-203ENST00000393879 JAKMIP1Q96N16 626 aaKnown RBP11.89□□□□□ -0.51
NKIRAS2-203ENST00000393879 BAG4O95429 457 aaKnown RBP11.88□□□□□ -0.51
NKIRAS2-203ENST00000393879 EIF4A1P60842 406 aaKnown RBP11.88□□□□□ -0.51
NKIRAS2-203ENST00000393879 BOLA2Q9H3K6 86 aa11.88□□□□□ -0.51
NKIRAS2-203ENST00000393879 TECPR2O15040 1411 aa11.88□□□□□ -0.51
NKIRAS2-203ENST00000393879 NPHP3Q7Z494 1330 aa11.88□□□□□ -0.51
NKIRAS2-203ENST00000393879 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
NKIRAS2-203ENST00000393879 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
NKIRAS2-203ENST00000393879 MAP2P11137 1827 aaKnown RBP11.88□□□□□ -0.51
NKIRAS2-203ENST00000393879 UBR1Q8IWV7 1749 aa11.88□□□□□ -0.51
NKIRAS2-203ENST00000393879 CABLES1Q8TDN4 633 aa11.87□□□□□ -0.51
NKIRAS2-203ENST00000393879 GRM8O00222 908 aa11.87□□□□□ -0.51
NKIRAS2-203ENST00000393879 CASTP20810 708 aaKnown RBP11.87□□□□□ -0.51
NKIRAS2-203ENST00000393879 RAB3GAP1Q15042 981 aa11.87□□□□□ -0.51
NKIRAS2-203ENST00000393879 LINS1Q8NG48 757 aa11.87□□□□□ -0.51
NKIRAS2-203ENST00000393879 SNRPA1P09661 255 aaKnown RBP11.87□□□□□ -0.51
NKIRAS2-203ENST00000393879 CWF19L2Q2TBE0 894 aaKnown RBP11.87□□□□□ -0.51
NKIRAS2-203ENST00000393879 PDRG1Q9NUG6 133 aa11.87□□□□□ -0.51
NKIRAS2-203ENST00000393879 SHPRHQ149N8 1683 aa11.87□□□□□ -0.51
NKIRAS2-203ENST00000393879 ANKARQ7Z5J8 1434 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 CHMLP26374 656 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 KIAA2012Q0VF49 1180 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 GNL2Q13823 731 aaKnown RBP11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 PRPF40BQ6NWY9 871 aaKnown RBP11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 COPS6Q7L5N1 327 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 NFATC2IPQ8NCF5 419 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 XAGE3Q8WTP9 111 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 USP44Q9H0E7 712 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 KIF20BQ96Q89 1820 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 ANAPC15P60006 121 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 TMX3Q96JJ7 454 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 USP31Q70CQ4 1352 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 A0A087WZG4 1122 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 DRC7Q8IY82 874 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 FAM43AQ8N2R8 423 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 ADGRB2O60241 1585 aa11.86□□□□□ -0.51
NKIRAS2-203ENST00000393879 NBPF7P0C2Y1 421 aaPredicted RBP11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 BLOC1S2Q6QNY1 142 aa11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 KIF6Q6ZMV9 814 aa11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 CHMP4CQ96CF2 233 aa11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 EVI5LQ96CN4 794 aa11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 PA2G4Q9UQ80 394 aaKnown RBP11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 OVOS2A0A0J9YW53 1432 aa11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 OVOS2Q6IE36 1432 aa11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 KCNQ3O43525 872 aa11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 FIBPO43427 364 aa11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 WASHC4Q2M389 1173 aa11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 RNF214Q8ND24 703 aa11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 DDX21Q9NR30 783 aaKnown RBP eCLIP11.85□□□□□ -0.51
NKIRAS2-203ENST00000393879 ATP5J2-PTCD1G3V325 749 aa11.84□□□□□ -0.51
NKIRAS2-203ENST00000393879 PDCP20941 246 aa11.84□□□□□ -0.51
NKIRAS2-203ENST00000393879 UBE3BQ7Z3V4 1068 aa11.84□□□□□ -0.51
NKIRAS2-203ENST00000393879 ZSCAN31Q96LW9 406 aaPredicted RBP11.84□□□□□ -0.51
NKIRAS2-203ENST00000393879 ANKRD1Q15327 319 aa11.84□□□□□ -0.51
NKIRAS2-203ENST00000393879 JARID2Q92833 1246 aaPredicted RBP11.84□□□□□ -0.51
NKIRAS2-203ENST00000393879 ANTXR1Q9H6X2 564 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms