RNA–Protein interactions for RNA: ENST00000393747.3

CTTN-204, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-204ENST00000393747 TEFQ10587 303 aa24.12■■□□□ 1.45
CTTN-204ENST00000393747 U2AF1L5P0DN76 240 aaPredicted RBP24.11■■□□□ 1.45
CTTN-204ENST00000393747 U2AF1Q01081 240 aaKnown RBP eCLIP24.11■■□□□ 1.451e-7■□□□□ 9.6
CTTN-204ENST00000393747 TTC5Q8N0Z6 440 aa24.11■■□□□ 1.45
CTTN-204ENST00000393747 BCL2L12Q9HB09 334 aa24.11■■□□□ 1.45
CTTN-204ENST00000393747 NUDCQ9Y266 331 aa24.11■■□□□ 1.45
CTTN-204ENST00000393747 HEG1Q9ULI3 1381 aa24.11■■□□□ 1.45
CTTN-204ENST00000393747 NARFQ9UHQ1 456 aa24.1■■□□□ 1.45
CTTN-204ENST00000393747 SIPA1L3O60292 1781 aaPredicted RBP24.1■■□□□ 1.45
CTTN-204ENST00000393747 N4BP2Q86UW6 1770 aaPredicted RBP24.1■■□□□ 1.45
CTTN-204ENST00000393747 KCNQ3O43525 872 aa24.1■■□□□ 1.45
CTTN-204ENST00000393747 ZPR1O75312 459 aa24.1■■□□□ 1.45
CTTN-204ENST00000393747 GIGYF1O75420 1035 aaPredicted RBP24.09■■□□□ 1.45
CTTN-204ENST00000393747 NFIXQ14938 502 aa24.09■■□□□ 1.45
CTTN-204ENST00000393747 BCS1LQ9Y276 419 aa24.09■■□□□ 1.45
CTTN-204ENST00000393747 FCHSD2O94868 740 aa24.08■■□□□ 1.44
CTTN-204ENST00000393747 CANXP27824 592 aaKnown RBP24.08■■□□□ 1.44
CTTN-204ENST00000393747 EIF5P55010 431 aaKnown RBP24.08■■□□□ 1.44
CTTN-204ENST00000393747 STARD3NLO95772 234 aa24.07■■□□□ 1.44
CTTN-204ENST00000393747 MCM10Q7L590 875 aa24.06■■□□□ 1.44
CTTN-204ENST00000393747 BTBD11A6QL63 1104 aa24.04■■□□□ 1.44
CTTN-204ENST00000393747 CHRNA5P30532 468 aa24.04■■□□□ 1.44
CTTN-204ENST00000393747 FMNL2Q96PY5 1086 aa24.04■■□□□ 1.44
CTTN-204ENST00000393747 BRCA1P38398 1863 aaKnown RBP24.03■■□□□ 1.44
CTTN-204ENST00000393747 DCTN1Q14203 1278 aa24.03■■□□□ 1.44
CTTN-204ENST00000393747 ZNF526Q8TF50 670 aaPredicted RBP24.02■■□□□ 1.44
CTTN-204ENST00000393747 TEX13AQ9BXU3 409 aaPredicted RBP24.02■■□□□ 1.44
CTTN-204ENST00000393747 A1BGP04217 495 aa24.01■■□□□ 1.43
CTTN-204ENST00000393747 PIM2Q9P1W9 311 aa24.01■■□□□ 1.43
CTTN-204ENST00000393747 PRAMEF22A3QJZ6 481 aa24■■□□□ 1.43
CTTN-204ENST00000393747 GPBP1L1Q9HC44 474 aaPredicted RBP24■■□□□ 1.43
CTTN-204ENST00000393747 NRXN2Q9P2S2 1712 aa24■■□□□ 1.43
CTTN-204ENST00000393747 CARMIL3Q8ND23 1372 aa23.99■■□□□ 1.43
CTTN-204ENST00000393747 SERPINB2P05120 415 aa23.99■■□□□ 1.43
CTTN-204ENST00000393747 IL6STP40189 918 aaPredicted RBP23.99■■□□□ 1.43
CTTN-204ENST00000393747 ARHGAP27Q6ZUM4 889 aa23.99■■□□□ 1.43
CTTN-204ENST00000393747 SENP3-EIF4A1A0A087X0R7 540 aa23.98■■□□□ 1.43
CTTN-204ENST00000393747 RTF1Q92541 710 aaKnown RBP23.98■■□□□ 1.43
CTTN-204ENST00000393747 PLEKHF1Q96S99 279 aa23.98■■□□□ 1.43
CTTN-204ENST00000393747 TBC1D2BQ9UPU7 963 aa23.98■■□□□ 1.43
CTTN-204ENST00000393747 USP16Q9Y5T5 823 aa23.98■■□□□ 1.43
CTTN-204ENST00000393747 A0A087WZG4 1122 aa23.97■■□□□ 1.43
CTTN-204ENST00000393747 HTATSF1O43719 755 aaKnown RBP23.97■■□□□ 1.43
CTTN-204ENST00000393747 DALRD3Q5D0E6 543 aaKnown RBP23.97■■□□□ 1.43
CTTN-204ENST00000393747 TBC1D9BQ66K14 1250 aa23.97■■□□□ 1.43
CTTN-204ENST00000393747 BICDL1Q6ZP65 573 aa23.96■■□□□ 1.43
CTTN-204ENST00000393747 ZNF330Q9Y3S2 320 aaPredicted RBP23.96■■□□□ 1.43
CTTN-204ENST00000393747 SCN7AQ01118 1682 aa23.96■■□□□ 1.43
CTTN-204ENST00000393747 CAMTA2O94983 1202 aa23.95■■□□□ 1.42
CTTN-204ENST00000393747 PIP4K2AP48426 406 aaPredicted RBP23.95■■□□□ 1.42
CTTN-204ENST00000393747 AFDNP55196 1824 aaKnown RBP23.95■■□□□ 1.42
CTTN-204ENST00000393747 KIF3CO14782 793 aa23.93■■□□□ 1.42
CTTN-204ENST00000393747 SNRPA1P09661 255 aaKnown RBP23.92■■□□□ 1.42
CTTN-204ENST00000393747 ARFGEF1Q9Y6D6 1849 aa23.92■■□□□ 1.42
CTTN-204ENST00000393747 CEP350Q5VT06 3117 aa23.92■■□□□ 1.42
CTTN-204ENST00000393747 C9orf131Q5VYM1 1079 aa23.91■■□□□ 1.42
CTTN-204ENST00000393747 MIS18AQ9NYP9 233 aa23.91■■□□□ 1.42
CTTN-204ENST00000393747 NBPF26B4DH59 902 aa23.9■■□□□ 1.42
CTTN-204ENST00000393747 TAF7Q15545 349 aaPredicted RBP23.9■■□□□ 1.42
CTTN-204ENST00000393747 NBPF10Q6P3W6 841 aaKnown RBP23.9■■□□□ 1.42
CTTN-204ENST00000393747 NBPF15Q8N660 670 aa23.9■■□□□ 1.42
CTTN-204ENST00000393747 PRR5LQ6MZQ0 368 aa23.89■■□□□ 1.42
CTTN-204ENST00000393747 DZIP3Q86Y13 1208 aaKnown RBP23.89■■□□□ 1.42
CTTN-204ENST00000393747 THUMPD2Q9BTF0 503 aaKnown RBP23.89■■□□□ 1.42
CTTN-204ENST00000393747 NFE2L2Q16236 605 aa23.88■■□□□ 1.41
CTTN-204ENST00000393747 C2CD5Q86YS7 1000 aa23.88■■□□□ 1.41
CTTN-204ENST00000393747 CCDC24Q8N4L8 307 aa23.88■■□□□ 1.41
CTTN-204ENST00000393747 RALBP1Q15311 655 aa23.86■■□□□ 1.41
CTTN-204ENST00000393747 PRELPP51888 382 aa23.85■■□□□ 1.41
CTTN-204ENST00000393747 RASSF7Q02833 373 aa23.85■■□□□ 1.41
CTTN-204ENST00000393747 DDX10Q13206 875 aaKnown RBP23.85■■□□□ 1.41
CTTN-204ENST00000393747 BRIP1Q9BX63 1249 aa23.85■■□□□ 1.41
CTTN-204ENST00000393747 BCORQ6W2J9 1755 aa23.85■■□□□ 1.41
CTTN-204ENST00000393747 DLEC1Q9Y238 1755 aa23.85■■□□□ 1.41
CTTN-204ENST00000393747 TTLL6Q8N841 843 aa23.84■■□□□ 1.41
CTTN-204ENST00000393747 NMRK2Q9NPI5 230 aa23.84■■□□□ 1.41
CTTN-204ENST00000393747 ANKRD31Q8N7Z5 1873 aa23.84■■□□□ 1.41
CTTN-204ENST00000393747 H0YIN7 160 aa23.84■■□□□ 1.41
CTTN-204ENST00000393747 NEFMP07197 916 aa23.84■■□□□ 1.41
CTTN-204ENST00000393747 NPM2Q86SE8 214 aaKnown RBP23.84■■□□□ 1.41
CTTN-204ENST00000393747 SETDB2Q96T68 719 aa23.84■■□□□ 1.41
CTTN-204ENST00000393747 RNF181Q9P0P0 153 aa23.84■■□□□ 1.41
CTTN-204ENST00000393747 EIF4A1P60842 406 aaKnown RBP23.83■■□□□ 1.4
CTTN-204ENST00000393747 DLG5Q8TDM6 1919 aa23.82■■□□□ 1.4
CTTN-204ENST00000393747 CLEC4GQ6UXB4 293 aa23.82■■□□□ 1.4
CTTN-204ENST00000393747 CNBD1Q8NA66 436 aa23.82■■□□□ 1.4
CTTN-204ENST00000393747 PNISRQ8TF01 805 aaKnown RBP23.82■■□□□ 1.4
CTTN-204ENST00000393747 KDM3BQ7LBC6 1761 aa23.81■■□□□ 1.4
CTTN-204ENST00000393747 MAPK8IP3Q9UPT6 1336 aa23.81■■□□□ 1.4
CTTN-204ENST00000393747 COL11A2P13942 1736 aaPredicted RBP23.81■■□□□ 1.4
CTTN-204ENST00000393747 NFKBIEO00221 500 aa23.8■■□□□ 1.4
CTTN-204ENST00000393747 PDE6BP35913 854 aa23.8■■□□□ 1.4
CTTN-204ENST00000393747 PNNQ9H307 717 aaKnown RBP23.79■■□□□ 1.4
CTTN-204ENST00000393747 MYBBP1AQ9BQG0 1328 aaKnown RBP23.78■■□□□ 1.4
CTTN-204ENST00000393747 RGL2O15211 777 aa23.78■■□□□ 1.4
CTTN-204ENST00000393747 HSPA6P17066 643 aa23.78■■□□□ 1.4
CTTN-204ENST00000393747 HLFQ16534 295 aa23.78■■□□□ 1.4
CTTN-204ENST00000393747 ZNF622Q969S3 477 aaKnown RBP eCLIP23.78■■□□□ 1.48e-8■■□□□ 11.9
CTTN-204ENST00000393747 PDZRN3Q9UPQ7 1066 aa23.78■■□□□ 1.4
CTTN-204ENST00000393747 ZNF652Q9Y2D9 606 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms